MGE detailed information
MGE type: Prophage MGE length: 44992 bp
Accession: NZ_CP028735 Location: 2330760..2375751 Organism: Escherichia coli strain A41 Replicon: chromosome
Accession: NZ_CP028735 Location: 2330760..2375751 Organism: Escherichia coli strain A41 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY94_RS11080 (2326749) | 2326749..2326796 | + | 48 | WP_211180494.1 | protein YnaN | - |
| AOY94_RS11085 (2326810) | 2326810..2327793 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| AOY94_RS24950 (2328068) | 2328068..2328241 | + | 174 | WP_001296046.1 | protein YnaL | - |
| AOY94_RS11090 (2328271) | 2328271..2329644 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| AOY94_RS11095 (2329773) | 2329773..2330708 | - | 936 | WP_001157377.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| AOY94_RS11100 (2330760) | 2330760..2331995 | - | 1236 | WP_240764565.1 | Putative defective protein IntQ ; Integrase | Integrase |
| AOY94_RS11105 (2331997) | 2331997..2332212 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (2332316) | 2332316..2332494 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2332316) | 2332316..2332494 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2332316) | 2332316..2332494 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2332316) | 2332316..2332494 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| AOY94_RS11110 (2332312) | 2332312..2332500 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| AOY94_RS11115 (2332493) | 2332493..2332687 | - | 195 | WP_072668032.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| AOY94_RS11120 (2332744) | 2332744..2333553 | - | 810 | WP_000166317.1 | recombination protein RecT | - |
| AOY94_RS11125 (2333546) | 2333546..2336197 | - | 2652 | WP_240764566.1 | exodeoxyribonuclease VIII | - |
| AOY94_RS11130 (2336296) | 2336296..2336570 | - | 275 | Protein_2167 | hypothetical protein | - |
| AOY94_RS11135 (2336644) | 2336644..2336814 | - | 171 | WP_240764567.1 | Rtr1/RPAP2 family protein phosphatase | - |
| AOY94_RS11140 (2336814) | 2336814..2337035 | - | 222 | WP_000560218.1 | killing protein KilR | - |
| AOY94_RS11145 (2337476) | 2337476..2337964 | + | 489 | WP_016233015.1 | superinfection exclusion B family protein | - |
| AOY94_RS11150 (2337961) | 2337961..2338116 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| AOY94_RS24955 (2338127) | 2338127..2338261 | - | 135 | WP_000233807.1 | hypothetical protein | - |
| AOY94_RS11155 (2338498) | 2338498..2338962 | - | 465 | WP_001253184.1 | helix-turn-helix domain-containing protein | - |
| AOY94_RS11160 (2339067) | 2339067..2339342 | + | 276 | WP_000171139.1 | YdaS family helix-turn-helix protein | - |
| AOY94_RS11165 (2339326) | 2339326..2339748 | + | 423 | WP_000702030.1 | toxin YdaT family protein | - |
| AOY94_RS11170 (2339826) | 2339826..2340614 | + | 789 | WP_240760613.1 | hypothetical protein | - |
| AOY94_RS11175 (2340621) | 2340621..2341367 | + | 747 | WP_240760612.1 | ATP-binding protein | - |
| AOY94_RS11180 (2341390) | 2341390..2342151 | + | 762 | WP_240760611.1 | DUF1627 domain-containing protein | - |
| AOY94_RS11185 (2342167) | 2342167..2342589 | + | 423 | WP_240764568.1 | DUF977 family protein | - |
| AOY94_RS11190 (2342586) | 2342586..2343110 | + | 525 | WP_187207349.1 | hypothetical protein | - |
| AOY94_RS11195 (2343283) | 2343283..2343744 | - | 462 | WP_021572583.1 | hypothetical protein | - |
| AOY94_RS11200 (2343732) | 2343732..2344616 | - | 885 | WP_000273481.1 | hypothetical protein | - |
| AOY94_RS11205 (2344900) | 2344900..2345055 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AOY94_RS11210 (2345307) | 2345307..2345384 | + | 78 | Protein_2184 | hypothetical protein | - |
| AOY94_RS11215 (2345540) | 2345540..2346139 | + | 600 | WP_000940343.1 | DUF1367 family protein | - |
| AOY94_RS11220 (2346139) | 2346139..2346429 | + | 291 | WP_240764569.1 | DUF1364 domain-containing protein | - |
| AOY94_RS11225 (2346426) | 2346426..2346962 | + | 537 | WP_000640164.1 | DUF1133 family protein | - |
| AOY94_RS11240 (2348238) | 2348238..2348630 | + | 393 | WP_240764570.1 | putative holin | - |
| AOY94_RS11245 (2348620) | 2348620..2348898 | + | 279 | WP_001398933.1 | phage holin family protein | - |
| AOY94_RS11250 (2348900) | 2348900..2349445 | + | 546 | WP_000836754.1 | glycosyl hydrolase 108 family protein | - |
| AOY94_RS11255 (2349672) | 2349672..2349785 | + | 114 | WP_001305859.1 | hypothetical protein | - |
| AOY94_RS11260 (2350096) | 2350096..2350308 | - | 213 | WP_071702711.1 | KTSC domain-containing protein | - |
| AOY94_RS11265 (2350284) | 2350284..2350463 | + | 180 | WP_105269289.1 | hypothetical protein | - |
| AOY94_RS24960 (2350582) | 2350582..2351373 | + | 792 | WP_276323156.1 | ParB/Srx family N-terminal domain-containing protein | - |
| AOY94_RS11275 (2351366) | 2351366..2352298 | + | 933 | WP_240764571.1 | hypothetical protein | - |
| AOY94_RS11280 (2352276) | 2352276..2352485 | + | 210 | WP_000126788.1 | hypothetical protein | - |
| AOY94_RS11285 (2352489) | 2352489..2353583 | + | 1095 | WP_240764572.1 | terminase small subunit | - |
| AOY94_RS11290 (2353564) | 2353564..2354865 | + | 1302 | WP_016233026.1 | terminase family protein | - |
| AOY94_RS11295 (2354868) | 2354868..2356274 | + | 1407 | WP_024043994.1 | DUF4055 domain-containing protein | - |
| AOY94_RS11300 (2356258) | 2356258..2357370 | + | 1113 | WP_024194236.1 | phage minor head protein | - |
| AOY94_RS11305 (2357475) | 2357475..2358239 | + | 765 | WP_000770040.1 | hypothetical protein | - |
| AOY94_RS11310 (2358338) | 2358338..2359477 | + | 1140 | WP_105283043.1 | P22 phage major capsid protein family protein | - |
| AOY94_RS11315 (2359520) | 2359520..2359744 | + | 225 | WP_240764573.1 | hypothetical protein | - |
| AOY94_RS11320 (2359748) | 2359748..2360143 | + | 396 | WP_089557589.1 | protein singed | - |
| AOY94_RS11325 (2360143) | 2360143..2360526 | + | 384 | WP_000524263.1 | hypothetical protein | - |
| AOY94_RS11330 (2360527) | 2360527..2360907 | + | 381 | WP_001029818.1 | hypothetical protein | - |
| AOY94_RS11335 (2360904) | 2360904..2361296 | + | 393 | WP_000144682.1 | phage tail terminator-like protein | - |
| AOY94_RS11340 (2361323) | 2361323..2362285 | + | 963 | WP_016233030.1 | phage tail tube protein | - |
| AOY94_RS11345 (2362436) | 2362436..2362795 | + | 360 | WP_122988443.1 | hypothetical protein | - |
| AOY94_RS24965 (2362978) | 2362978..2363103 | + | 126 | WP_001635124.1 | hypothetical protein | - |
| AOY94_RS11350 (2363266) | 2363266..2366499 | + | 3234 | WP_240764574.1 | phage tail tape measure protein | - |
| AOY94_RS11355 (2366492) | 2366492..2366830 | + | 339 | WP_240764575.1 | phage tail protein | - |
| AOY94_RS11360 (2366830) | 2366830..2367528 | + | 699 | WP_240764576.1 | phage minor tail protein L | - |
| AOY94_RS11365 (2367535) | 2367535..2368278 | + | 744 | WP_240764577.1 | C40 family peptidase | - |
| AOY94_RS11370 (2368176) | 2368176..2368823 | + | 648 | WP_240764578.1 | tail assembly protein | - |
| AOY94_RS11375 (2368884) | 2368884..2372279 | + | 3396 | WP_240764579.1 | host specificity protein J | - |
| AOY94_RS11380 (2372347) | 2372347..2372946 | + | 600 | WP_240764580.1 | Outer membrane protein X | VF |
| AOY94_RS11385 (2373010) | 2373010..2375751 | + | 2742 | WP_240764581.1 | prophage tail fiber N-terminal domain-containing protein | - |
| AOY94_RS11390 (2376214) | 2376214..2376441 | + | 228 | Protein_2219 | hypothetical protein | - |
| AOY94_RS11395 (2376461) | 2376461..2376577 | + | 117 | Protein_2220 | tail fiber assembly protein | - |
| AOY94_RS11400 (2376697) | 2376697..2377587 | - | 891 | WP_000488336.1 | manganese catalase family protein | - |
| AOY94_RS11405 (2377606) | 2377606..2378112 | - | 507 | WP_240764582.1 | ferritin-like domain-containing protein | - |
| AOY94_RS11410 (2378149) | 2378149..2378649 | - | 501 | WP_240764583.1 | ferritin-like domain-containing protein | - |
| AOY94_RS11415 (2378728) | 2378728..2378910 | - | 183 | WP_000134810.1 | general stress protein | - |
| AOY94_RS11420 (2379561) | 2379561..2380418 | - | 858 | WP_240764584.1 | iron/manganese ABC transporter permease subunit SitD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|