MGE detailed information
MGE type: Prophage MGE length: 28290 bp
Accession: NZ_CP028732 Location: 2529183..2557472 Organism: Escherichia coli strain H3 Replicon: chromosome
Accession: NZ_CP028732 Location: 2529183..2557472 Organism: Escherichia coli strain H3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY60_RS12205 (2525698) | 2525698..2526444 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| AOY60_RS12210 (2526533) | 2526533..2527219 | + | 687 | WP_201473061.1 | DNA-binding transcriptional regulator rspR | - |
| AOY60_RS12215 (2527396) | 2527396..2527599 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| AOY60_RS12220 (2527634) | 2527634..2529094 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| AOY60_RS12225 (2529183) | 2529183..2530466 | - | 1284 | Protein_2384 | MHS family MFS transporter YdfJ | - |
| AOY60_RS12230 (2531070) | 2531070..2531183 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| AOY60_RS12235 (2531252) | 2531252..2531485 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| AOY60_RS12240 (2531802) | 2531802..2532392 | + | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| AOY60_RS12245 (2532490) | 2532490..2533065 | - | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| AOY60_RS12250 (2533065) | 2533065..2533277 | - | 213 | Protein_2389 | hypothetical protein | - |
| AOY60_RS12255 (2533364) | 2533364..2533666 | - | 303 | Protein_2390 | hypothetical protein | - |
| AOY60_RS12260 (2533624) | 2533624..2534169 | - | 546 | WP_000453589.1 | DNA-packaging protein | - |
| AOY60_RS12265 (2534558) | 2534558..2534791 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| AOY60_RS12270 (2534849) | 2534849..2535259 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| AOY60_RS12275 (2535411) | 2535411..2535584 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| AOY60_RS12280 (2535756) | 2535756..2535986 | - | 231 | WP_000720962.1 | protein YnfN | - |
| AOY60_RS12285 (2535991) | 2535991..2536056 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| AOY60_RS12290 (2536059) | 2536059..2536247 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| AOY60_RS12295 (2536258) | 2536258..2536470 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| AOY60_RS12300 (2536833) | 2536833..2537330 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| AOY60_RS12305 (2537327) | 2537327..2537860 | - | 534 | WP_001092971.1 | lysozyme | - |
| AOY60_RS12310 (2537857) | 2537857..2538168 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| AOY60_RS12315 (2538173) | 2538173..2538388 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| AOY60_RS12320 (2538608) | 2538608..2538778 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| AOY60_RS12325 (2539142) | 2539142..2539357 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| AOY60_RS12330 (2539658) | 2539658..2539870 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| AOY60_RS12335 (2539925) | 2539925..2540014 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| AOY60_RS12340 (2540292) | 2540292..2541044 | - | 753 | WP_001047135.1 | antitermination protein | - |
| AOY60_RS12345 (2541058) | 2541058..2542107 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| AOY60_RS12350 (2542109) | 2542109..2542387 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| AOY60_RS12355 (2542454) | 2542454..2542705 | - | 252 | WP_000980994.1 | protein Rem | - |
| AOY60_RS12360 (2542922) | 2542922..2543077 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AOY60_RS12365 (2543149) | 2543149..2543436 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| AOY60_RS12370 (2543436) | 2543436..2543675 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| AOY60_RS12375 (2543700) | 2543700..2544005 | + | 306 | WP_001326990.1 | protein YdfV | - |
| AOY60_RS12380 (2544208) | 2544208..2544540 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| AOY60_RS12385 (2544977) | 2544977..2545126 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| AOY60_RS12390 (2545199) | 2545199..2546269 | - | 1071 | Protein_2417 | ISNCY family transposase ISCARN112 | Transposase |
| AOY60_RS12395 (2547059) | 2547059..2547346 | - | 288 | Protein_2418 | hypothetical protein | - |
| AOY60_RS12400 (2547824) | 2547824..2548313 | - | 490 | Protein_2419 | class I SAM-dependent methyltransferase | - |
| AOY60_RS12405 (2548310) | 2548310..2548561 | - | 252 | Protein_2420 | DUF977 family protein | - |
| AOY60_RS12410 (2548551) | 2548551..2548931 | + | 381 | Protein_2421 | hypothetical protein | - |
| AOY60_RS12415 (2548974) | 2548974..2550127 | - | 1154 | Protein_2422 | IS3 family transposase ISSd1 | Transposase |
| AOY60_RS12420 (2550190) | 2550190..2551797 | + | 1608 | Protein_2423 | 3'-5' exoribonuclease | - |
| AOY60_RS12425 (2551870) | 2551870..2552121 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| AOY60_RS12430 (2552156) | 2552156..2553436 | + | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| AOY60_RS12435 (2553624) | 2553624..2554643 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| AOY60_RS12440 (2554655) | 2554655..2555869 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| AOY60_RS12445 (2556075) | 2556075..2556401 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| AOY60_RS12450 (2556536) | 2556536..2556877 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| AOY60_RS12455 (2556912) | 2556912..2557472 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| AOY60_RS12460 (2557475) | 2557475..2558185 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| AOY60_RS12465 (2558293) | 2558293..2558598 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| AOY60_RS12470 (2558797) | 2558797..2561223 | + | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|