MGE detailed information
MGE type: Genomic_island MGE length: 11315 bp
Accession: NZ_CP028732 Location: 2479310..2490624 Organism: Escherichia coli strain H3 Replicon: chromosome
Accession: NZ_CP028732 Location: 2479310..2490624 Organism: Escherichia coli strain H3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY60_RS11975 (2474575) | 2474575..2476947 | - | 2373 | WP_000832454.1 | TonB-dependent receptor plug domain-containing protein | - |
| AOY60_RS11980 (2476985) | 2476985..2478670 | - | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| AOY60_RS11985 (2478873) | 2478873..2478995 | + | 123 | WP_120795387.1 | protein YneP | - |
| AOY60_RS11990 (2478961) | 2478961..2479582 | - | 622 | Protein_2337 | SPASM domain-containing protein | - |
| AOY60_RS11995 (2479634) | 2479634..2481316 | - | 1683 | WP_001295684.1 | sulfatase | - |
| AOY60_RS12000 (2481718) | 2481718..2482479 | - | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| AOY60_RS12005 (2482554) | 2482554..2482751 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| AOY60_RS12010 (2482999) | 2482999..2485278 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| AOY60_RS12015 (2485612) | 2485612..2486526 | - | 915 | WP_000520676.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| AOY60_RS12020 (2486585) | 2486585..2487088 | - | 504 | WP_000825452.1 | Protein FimG | VF |
| AOY60_RS12025 (2487101) | 2487101..2487631 | - | 531 | WP_000876763.1 | Protein FimF | VF |
| AOY60_RS12030 (2487645) | 2487645..2488391 | - | 747 | Protein_2345 | Outer membrane usher protein FimD | VF |
| AOY60_RS12035 (2488516) | 2488516..2488724 | - | 209 | Protein_2346 | AraC family transcriptional regulator | - |
| AOY60_RS12040 (2489036) | 2489036..2490358 | - | 1323 | WP_201473063.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| AOY60_RS12045 (2490358) | 2490358..2490624 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.003 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.005 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.004 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.003 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.003 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.003 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.003 |