MGE detailed information
MGE type: Prophage MGE length: 107845 bp
Accession: NZ_CP028700 Location: 2452427..2560271 Organism: Escherichia coli strain 105 Replicon: chromosome
Accession: NZ_CP028700 Location: 2452427..2560271 Organism: Escherichia coli strain 105 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E34_RS12390 () | 2448327..2449547 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| C9E34_RS12395 () | 2449672..2450367 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| C9E34_RS12400 () | 2450320..2451612 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| C9E34_RS12405 () | 2451770..2452384 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| C9E34_RS12410 () | 2452427..2453281 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| C9E34_RS12415 () | 2453283..2453900 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| C9E34_RS12420 () | 2453911..2456334 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E34_RS12425 () | 2456395..2458821 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E34_RS12430 () | 2459020..2459325 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| C9E34_RS12435 () | 2459433..2460143 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| C9E34_RS12440 () | 2460146..2460706 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C9E34_RS12445 () | 2460741..2461082 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| C9E34_RS12450 () | 2461217..2461543 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| C9E34_RS12460 () | 2461815..2462497 | - | 683 | Protein_2390 | DUF3596 domain-containing protein | - |
| C9E34_RS12465 () | 2462532..2462783 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| C9E34_RS12470 () | 2462856..2465327 | - | 2472 | WP_137119283.1 | exonuclease | - |
| C9E34_RS12475 () | 2465420..2465611 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C9E34_RS12480 () | 2465608..2465796 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C9E34_RS12490 () | 2466365..2466583 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| C9E34_RS12495 () | 2466655..2466954 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| C9E34_RS12500 () | 2467307..2467585 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E34_RS12505 () | 2467587..2467778 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C9E34_RS12510 () | 2467799..2468170 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| C9E34_RS12515 () | 2468268..2468570 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| C9E34_RS12520 () | 2468567..2468992 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C9E34_RS12525 () | 2469015..2469977 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| C9E34_RS12530 () | 2469984..2470724 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| C9E34_RS12535 () | 2470750..2471519 | + | 770 | Protein_2404 | DUF1627 domain-containing protein | - |
| C9E34_RS12540 () | 2471535..2471930 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| C9E34_RS12545 () | 2471987..2472571 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| C9E34_RS12550 () | 2472687..2472791 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| C9E34_RS12555 () | 2473037..2473192 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| C9E34_RS12560 () | 2473360..2473638 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| C9E34_RS12565 () | 2473640..2474689 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| C9E34_RS12570 () | 2474702..2475061 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E34_RS12575 () | 2475058..2475747 | + | 690 | WP_001059381.1 | antiterminator | - |
| C9E34_RS12600 () | 2476387..2476815 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| C9E34_RS12605 () | 2476812..2477067 | + | 256 | Protein_2414 | DUF3927 family protein | - |
| C9E34_RS12610 () | 2477294..2479144 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| C9E34_RS12615 () | 2479584..2479799 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E34_RS12620 () | 2479804..2480148 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E34_RS12625 () | 2480199..2480732 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E34_RS12630 () | 2481003..2481572 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E34_RS12635 () | 2481572..2481718 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C9E34_RS12645 () | 2481946..2482131 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C9E34_RS12650 () | 2482556..2482783 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| C9E34_RS12655 () | 2482825..2483190 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| C9E34_RS12665 () | 2483480..2484043 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| C9E34_RS12670 () | 2484040..2485701 | + | 1662 | WP_001301491.1 | terminase large subunit | - |
| C9E34_RS12675 () | 2485765..2487702 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| C9E34_RS12680 () | 2487747..2487968 | + | 222 | WP_001063094.1 | hypothetical protein | - |
| C9E34_RS12685 () | 2487914..2490493 | + | 2580 | WP_001304108.1 | phage portal protein | - |
| C9E34_RS12690 () | 2490496..2490822 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| C9E34_RS12695 () | 2490832..2491182 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| C9E34_RS12700 () | 2491179..2491625 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| C9E34_RS12705 () | 2491622..2491966 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C9E34_RS12710 () | 2492032..2492748 | + | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| C9E34_RS12715 () | 2492763..2493137 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| C9E34_RS12720 () | 2493233..2493442 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| C9E34_RS12725 () | 2493490..2496732 | + | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| C9E34_RS12730 () | 2496725..2497066 | + | 342 | WP_000807954.1 | phage tail protein | - |
| C9E34_RS12735 () | 2497066..2497764 | + | 699 | WP_001179481.1 | phage minor tail protein L | - |
| C9E34_RS12740 () | 2497775..2498518 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| C9E34_RS12745 () | 2498464..2499096 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| C9E34_RS12750 () | 2499438..2500642 | + | 1205 | Protein_2441 | phage tail protein | - |
| C9E34_RS28580 () | 2500733..2502229 | + | 1497 | Protein_2442 | DUF1983 domain-containing protein | - |
| C9E34_RS28585 () | 2502257..2502912 | + | 656 | Protein_2443 | DUF3672 domain-containing protein | - |
| C9E34_RS12760 () | 2502980..2503579 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| C9E34_RS12765 () | 2503644..2504867 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C9E34_RS12770 () | 2504869..2505138 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E34_RS12775 () | 2505252..2505827 | + | 576 | Protein_2447 | hypothetical protein | VF |
| C9E34_RS12785 () | 2506538..2507188 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| C9E34_RS12790 () | 2507338..2507733 | + | 396 | Protein_2449 | IS256 family transposase ISEic2 | Transposase |
| C9E34_RS12795 () | 2507771..2509309 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| C9E34_RS12800 () | 2509359..2509706 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C9E34_RS12805 () | 2509703..2510083 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| C9E34_RS12810 () | 2510178..2510996 | + | 819 | Protein_2453 | IS256 family transposase IS1414 | Transposase |
| C9E34_RS12815 () | 2511046..2511288 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E34_RS12820 () | 2511466..2512017 | - | 552 | Protein_2455 | Putative defective protein IntQ ; Integrase | Integrase |
| C9E34_RS12825 () | 2512005..2513243 | - | 1239 | Protein_2456 | exonuclease | - |
| C9E34_RS12830 () | 2513336..2513524 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| C9E34_RS12835 () | 2513521..2513709 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| C9E34_RS12845 () | 2514274..2514483 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| C9E34_RS12850 () | 2514484..2515122 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| C9E34_RS12855 () | 2515134..2515286 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| C9E34_RS12860 () | 2515579..2515917 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| C9E34_RS12865 () | 2516309..2516551 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| C9E34_RS12870 () | 2516535..2516960 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| C9E34_RS12875 () | 2517029..2518072 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| C9E34_RS12880 () | 2518065..2518526 | + | 462 | WP_000139447.1 | replication protein | - |
| C9E34_RS12885 () | 2518560..2519276 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| C9E34_RS12890 () | 2519309..2519590 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| C9E34_RS12895 () | 2519587..2519814 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| C9E34_RS12900 () | 2519807..2520118 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| C9E34_RS12905 () | 2520246..2520464 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C9E34_RS12910 () | 2520466..2521023 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| C9E34_RS12915 () | 2521314..2521469 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9E34_RS12920 () | 2521589..2521933 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C9E34_RS12925 () | 2522055..2522327 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| C9E34_RS12930 () | 2522329..2523378 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| C9E34_RS12935 () | 2523391..2523696 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E34_RS12940 () | 2523759..2524313 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| C9E34_RS12945 () | 2524538..2524735 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| C9E34_RS12950 () | 2524871..2525584 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| C9E34_RS12965 () | 2526035..2526466 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| C9E34_RS12970 () | 2526463..2526718 | + | 256 | Protein_2482 | DUF3927 family protein | - |
| C9E34_RS12975 () | 2526944..2528794 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| C9E34_RS12980 () | 2529233..2529448 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E34_RS12985 () | 2529453..2529797 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E34_RS12990 () | 2529848..2530381 | + | 534 | WP_000992148.1 | lysozyme | - |
| C9E34_RS12995 () | 2530652..2531221 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E34_RS13000 () | 2531221..2531367 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| C9E34_RS13005 () | 2531590..2531775 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C9E34_RS13010 () | 2532301..2532615 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| C9E34_RS13015 () | 2532697..2532921 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| C9E34_RS13025 () | 2533308..2533853 | + | 546 | WP_000867493.1 | terminase small subunit | - |
| C9E34_RS13030 () | 2533828..2535753 | + | 1926 | WP_001027223.1 | phage terminase large subunit family protein | - |
| C9E34_RS13035 () | 2535750..2535956 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C9E34_RS13040 () | 2535953..2537554 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| C9E34_RS13045 () | 2537535..2538854 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| C9E34_RS13050 () | 2538864..2539196 | + | 333 | WP_001295978.1 | head decoration protein | - |
| C9E34_RS13055 () | 2539252..2540277 | + | 1026 | WP_000063265.1 | major capsid protein | - |
| C9E34_RS13060 () | 2540319..2540717 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| C9E34_RS13065 () | 2540729..2541082 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| C9E34_RS13070 () | 2541097..2541630 | + | 534 | WP_000975020.1 | phage tail protein | - |
| C9E34_RS13075 () | 2541627..2542022 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| C9E34_RS13080 () | 2542030..2542782 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| C9E34_RS13085 () | 2542796..2543218 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| C9E34_RS13090 () | 2543245..2543658 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C9E34_RS13095 () | 2543639..2546251 | + | 2613 | WP_000081804.1 | phage tail tape measure protein | - |
| C9E34_RS13100 () | 2546248..2546577 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C9E34_RS13105 () | 2546577..2547275 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| C9E34_RS13110 () | 2547286..2548029 | + | 744 | WP_000194798.1 | C40 family peptidase | - |
| C9E34_RS13115 () | 2547975..2548604 | + | 630 | WP_072147834.1 | tail assembly protein | - |
| C9E34_RS13120 () | 2548845..2552324 | + | 3480 | WP_000514945.1 | host specificity protein J | - |
| C9E34_RS13125 () | 2552392..2552991 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| C9E34_RS13130 () | 2553056..2554279 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C9E34_RS13135 () | 2554281..2554550 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E34_RS13140 () | 2554664..2555239 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| C9E34_RS13145 () | 2555312..2555941 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| C9E34_RS13150 () | 2556023..2556664 | + | 642 | WP_001143808.1 | hypothetical protein | VF |
| C9E34_RS13160 () | 2556826..2557068 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E34_RS13165 () | 2557200..2558483 | + | 1284 | Protein_2519 | MHS family MFS transporter YdfJ | - |
| C9E34_RS13170 () | 2558572..2560032 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| C9E34_RS13175 () | 2560068..2560271 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C9E34_RS13180 () | 2560448..2561134 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C9E34_RS13185 () | 2561223..2561969 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| C9E34_RS13190 () | 2562106..2564151 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| C9E34_RS13195 () | 2564196..2564714 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA1008 | NC_002695 | 2157035..2254487 | 0.004 |