MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92730 bp
Accession: NZ_CP028694 Location: 1..92730 Organism: Escherichia coli strain 108 Replicon: plasmid pTA108
Accession: NZ_CP028694 Location: 1..92730 Organism: Escherichia coli strain 108 Replicon: plasmid pTA108
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E37_RS27805 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| C9E37_RS27820 () | 1782..2066 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C9E37_RS27825 () | 2066..2341 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E37_RS27830 () | 2436..2642 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| C9E37_RS27835 () | 2742..2957 | - | 216 | Protein_5 | transposase | - |
| C9E37_RS27840 () | 3001..3567 | - | 567 | Protein_6 | IS3-like element IS600 family transposase | - |
| C9E37_RS27845 () | 3567..3983 | - | 417 | Protein_7 | IS91 family transposase | - |
| C9E37_RS27850 () | 3983..4168 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| C9E37_RS27855 () | 4345..6555 | + | 2211 | WP_000592771.1 | catalase/peroxidase KatP | - |
| C9E37_RS27860 () | 6599..6988 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C9E37_RS27865 () | 7045..8033 | + | 989 | Protein_11 | IS3 family transposase | - |
| C9E37_RS27875 () | 8214..12116 | + | 3903 | WP_001034100.1 | serine protease autotransporter EspP | - |
| C9E37_RS27880 () | 12372..12853 | - | 482 | Protein_13 | IS1 family transposase | - |
| C9E37_RS27890 () | 14295..15116 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C9E37_RS27895 () | 15116..16222 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C9E37_RS27900 () | 16312..18033 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C9E37_RS27905 () | 18107..19105 | + | 999 | WP_001302181.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| C9E37_RS27910 () | 19158..19346 | + | 189 | Protein_18 | hypothetical protein | - |
| C9E37_RS27915 () | 19450..19536 | - | 87 | Protein_19 | transposase | - |
| C9E37_RS27925 () | 19987..22683 | + | 2697 | WP_001358886.1 | metalloprotease StcE | - |
| C9E37_RS27930 () | 22770..23645 | + | 876 | WP_001302175.1 | type II secretion system protein GspC | - |
| C9E37_RS27935 () | 23646..25613 | + | 1968 | WP_001302177.1 | variant type II secretion system secretin EtpD | - |
| C9E37_RS27940 () | 25613..27118 | + | 1506 | WP_000092338.1 | type II secretion system ATPase GspE | - |
| C9E37_RS27945 () | 27120..28343 | + | 1224 | WP_001173152.1 | type II secretion system inner membrane protein GspF | - |
| C9E37_RS27950 () | 28374..28808 | + | 435 | WP_001231211.1 | type II secretion system major pseudopilin GspG | - |
| C9E37_RS27955 () | 28805..29359 | + | 555 | WP_000082929.1 | type II secretion system minor pseudopilin GspH | - |
| C9E37_RS27960 () | 29374..29721 | + | 348 | WP_000173396.1 | type II secretion system minor pseudopilin GspI | - |
| C9E37_RS27965 () | 29718..30317 | + | 600 | WP_000082782.1 | type II secretion system minor pseudopilin GspJ | - |
| C9E37_RS27970 () | 30314..31291 | + | 978 | WP_000776550.1 | type II secretion system minor pseudopilin GspK | - |
| C9E37_RS27975 () | 31330..32502 | + | 1173 | WP_071525076.1 | type II secretion system protein GspL | - |
| C9E37_RS27980 () | 32489..33001 | + | 513 | WP_001004187.1 | type II secretion system protein M | - |
| C9E37_RS27985 () | 33059..33892 | + | 834 | WP_000096786.1 | A24 family peptidase | - |
| C9E37_RS27990 () | 33984..34385 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| C9E37_RS27995 () | 34564..35735 | + | 1172 | Protein_34 | IS3 family transposase | - |
| C9E37_RS28005 () | 36276..36791 | + | 516 | WP_000839950.1 | enterohemolysin-activating lysine-acyltransferase EhxC | - |
| C9E37_RS28010 () | 36793..39789 | + | 2997 | WP_000217739.1 | enterohemolysin EhxA | - |
| C9E37_RS28015 () | 39839..41959 | + | 2121 | WP_000987091.1 | enterohemolysin T1SS ABC transporter permease/ATPase EhxB | - |
| C9E37_RS28020 () | 41963..43402 | + | 1440 | WP_001213545.1 | enterohemolysin T1SS ABC transporter subunit EhxD | - |
| C9E37_RS28545 () | 43523..44015 | + | 493 | Protein_39 | MarR family transcriptional regulator | - |
| C9E37_RS28040 () | 44146..44376 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| C9E37_RS28045 () | 44497..45237 | + | 741 | WP_001066920.1 | tyrosine-type recombinase/integrase | - |
| C9E37_RS28050 () | 45522..46498 | - | 977 | Protein_42 | RepB family plasmid replication initiator protein | - |
| C9E37_RS28060 () | 46906..47106 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| C9E37_RS28065 () | 47103..47723 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| C9E37_RS28070 () | 47720..48403 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| C9E37_RS28075 () | 48862..49080 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C9E37_RS28080 () | 49082..49387 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C9E37_RS28085 () | 49388..50194 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| C9E37_RS28095 () | 50917..52129 | - | 1213 | Protein_49 | IS3 family transposase | - |
| C9E37_RS28100 () | 52091..52429 | + | 339 | WP_071525396.1 | RepB family plasmid replication initiator protein | - |
| C9E37_RS28105 () | 53017..54183 | + | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| C9E37_RS28110 () | 54183..55154 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C9E37_RS28135 () | 56454..58178 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| C9E37_RS28140 () | 58255..59157 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| C9E37_RS28145 () | 59161..59466 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| C9E37_RS28155 () | 59543..60226 | + | 684 | WP_000085945.1 | DNA methylase | - |
| C9E37_RS28160 () | 60227..60448 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| C9E37_RS28165 () | 60342..60896 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| C9E37_RS28550 () | 60942..61718 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| C9E37_RS28180 () | 62259..62561 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| C9E37_RS28185 () | 62608..63030 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| C9E37_RS28190 () | 63027..63218 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C9E37_RS28555 () | 63188..63697 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| C9E37_RS28205 () | 64214..64444 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C9E37_RS28210 () | 64496..65857 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| C9E37_RS28215 () | 65904..66467 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| C9E37_RS28220 () | 66553..67008 | - | 456 | WP_001358896.1 | hypothetical protein | - |
| C9E37_RS28225 () | 67078..67284 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| C9E37_RS28230 () | 67310..67762 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| C9E37_RS28235 () | 67819..68052 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| C9E37_RS28240 () | 68118..70076 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| C9E37_RS28245 () | 70131..70565 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| C9E37_RS28250 () | 70562..71323 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 71292..71490 | + | 199 | NuclAT_0 | - | - |
| - () | 71292..71490 | + | 199 | NuclAT_0 | - | - |
| - () | 71292..71490 | + | 199 | NuclAT_0 | - | - |
| - () | 71292..71490 | + | 199 | NuclAT_0 | - | - |
| C9E37_RS28255 () | 71555..71713 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9E37_RS28260 () | 71847..73868 | + | 2022 | Protein_75 | relaxase/mobilization nuclease domain-containing protein | - |
| C9E37_RS28265 () | 73936..74367 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| C9E37_RS28280 () | 75046..75395 | - | 350 | Protein_77 | IS3 family transposase | - |
| C9E37_RS28285 () | 75489..75752 | + | 264 | Protein_78 | IS21 family transposase | - |
| C9E37_RS28290 () | 75792..75912 | + | 121 | Protein_79 | ATP-binding protein | - |
| C9E37_RS28295 () | 75909..76061 | + | 153 | Protein_80 | IS1 family transposase | - |
| C9E37_RS28300 () | 76168..85677 | + | 9510 | WP_000581721.1 | toxin B | - |
| C9E37_RS28305 () | 85751..85975 | + | 225 | Protein_82 | IS3 family transposase | - |
| C9E37_RS28310 () | 86043..86213 | - | 171 | Protein_83 | ATP-binding protein | - |
| C9E37_RS28315 () | 86220..86471 | - | 252 | Protein_84 | transposase | - |
| C9E37_RS28320 () | 86528..87916 | + | 1389 | Protein_85 | conjugative transfer relaxase/helicase TraI | - |
| C9E37_RS28325 () | 87936..88682 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| C9E37_RS28330 () | 88741..89601 | + | 861 | WP_000704522.1 | alpha/beta hydrolase | - |
| C9E37_RS28335 () | 89704..90264 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| C9E37_RS28340 () | 90397..90609 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| C9E37_RS28345 () | 90854..91315 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| C9E37_RS28350 () | 91361..91570 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| C9E37_RS28355 () | 91608..91946 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| C9E37_RS28360 () | 92186..92440 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|