MGE detailed information
MGE type: Genomic_island MGE length: 11281 bp
Accession: NZ_CP028693 Location: 823768..835048 Organism: Escherichia coli strain 108 Replicon: chromosome
Accession: NZ_CP028693 Location: 823768..835048 Organism: Escherichia coli strain 108 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E37_RS04095 () | 820093..821301 | - | 1209 | WP_001301837.1 | propionate kinase | - |
| C9E37_RS04100 () | 821327..822658 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| C9E37_RS04105 () | 822680..823669 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| C9E37_RS04110 () | 823768..824706 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| C9E37_RS28600 () | 825021..825239 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| C9E37_RS04120 () | 825495..826034 | + | 540 | WP_000675739.1 | hypothetical protein | - |
| C9E37_RS04125 () | 826056..827243 | + | 1188 | WP_000484640.1 | YhaC family protein | - |
| C9E37_RS04135 () | 827872..829017 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| C9E37_RS04140 () | 829114..830004 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| C9E37_RS04145 () | 830034..830804 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| C9E37_RS04150 () | 830820..832154 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| C9E37_RS04155 () | 832529..834100 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| C9E37_RS04160 () | 834249..834584 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| C9E37_RS04165 () | 834584..835048 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| C9E37_RS04170 () | 835103..835912 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| C9E37_RS04175 () | 836161..837441 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| C9E37_RS04180 () | 837464..837937 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| C9E37_RS04185 () | 837948..838727 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| C9E37_RS04190 () | 838717..839595 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| C9E37_RS04195 () | 839613..840047 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0.003 |