MGE detailed information
MGE type: Genomic_island MGE length: 21234 bp
Accession: NZ_CP028693 Location: 4779157..4800390 Organism: Escherichia coli strain 108 Replicon: chromosome
Accession: NZ_CP028693 Location: 4779157..4800390 Organism: Escherichia coli strain 108 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E37_RS24655 () | 4774883..4775425 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| C9E37_RS24660 () | 4775718..4777868 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| C9E37_RS24665 () | 4777918..4778121 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| C9E37_RS24670 () | 4778132..4779088 | + | 957 | WP_001297640.1 | GTPase | - |
| C9E37_RS24675 () | 4779157..4780515 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| C9E37_RS24680 () | 4780524..4780808 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| C9E37_RS24685 () | 4781086..4783518 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| C9E37_RS24690 () | 4783585..4785054 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| C9E37_RS24695 () | 4785054..4786808 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4786958..4787034 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4786958..4787034 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4786958..4787034 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4786958..4787034 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4786958..4787034 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4786958..4787034 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4786958..4787034 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4786958..4787034 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| C9E37_RS24700 () | 4787029..4787370 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| C9E37_RS24705 () | 4787417..4788580 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| C9E37_RS24710 () | 4788628..4789509 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| C9E37_RS24715 () | 4789606..4789770 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| C9E37_RS24720 () | 4789947..4791359 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| C9E37_RS28535 () | 4791602..4791802 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| C9E37_RS24725 () | 4791807..4792559 | - | 753 | Protein_4704 | Recombination-promoting nuclease RpnD | VF |
| C9E37_RS24730 () | 4793026..4794258 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| C9E37_RS24735 () | 4794299..4795570 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| C9E37_RS24740 () | 4795686..4796837 | + | 1152 | WP_001302771.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| C9E37_RS24745 () | 4796847..4797614 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| C9E37_RS24750 () | 4797611..4797877 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| C9E37_RS24755 () | 4798189..4800390 | + | 2202 | WP_000535071.1 | hypothetical protein | VF |
| C9E37_RS24765 () | 4800656..4801498 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| C9E37_RS24770 () | 4801566..4802744 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |