MGE detailed information
MGE type: Prophage MGE length: 97455 bp
Accession: NZ_CP028693 Location: 2466220..2563674 Organism: Escherichia coli strain 108 Replicon: chromosome
Accession: NZ_CP028693 Location: 2466220..2563674 Organism: Escherichia coli strain 108 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E37_RS12460 () | 2462898..2463203 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| C9E37_RS12465 () | 2463311..2464021 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| C9E37_RS12470 () | 2464024..2464584 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C9E37_RS12475 () | 2464619..2464960 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| C9E37_RS12480 () | 2465095..2465421 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| C9E37_RS12490 () | 2465693..2466375 | - | 683 | Protein_2394 | DUF3596 domain-containing protein | - |
| C9E37_RS12495 () | 2466410..2466661 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| C9E37_RS12500 () | 2466734..2469205 | - | 2472 | WP_000048458.1 | exonuclease | - |
| C9E37_RS12505 () | 2469298..2469489 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C9E37_RS12510 () | 2469486..2469674 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C9E37_RS12520 () | 2470243..2470461 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| C9E37_RS12525 () | 2470533..2470832 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| C9E37_RS12530 () | 2471185..2471463 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E37_RS12535 () | 2471465..2471656 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C9E37_RS12540 () | 2471677..2472048 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| C9E37_RS12545 () | 2472146..2472448 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| C9E37_RS12550 () | 2472445..2472870 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C9E37_RS12555 () | 2472893..2473855 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| C9E37_RS12560 () | 2473862..2474602 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| C9E37_RS12565 () | 2474628..2475397 | + | 770 | Protein_2408 | DUF1627 domain-containing protein | - |
| C9E37_RS12570 () | 2475413..2475808 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| C9E37_RS12575 () | 2475865..2476449 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| C9E37_RS12580 () | 2476565..2476669 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| C9E37_RS12585 () | 2476915..2477070 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| C9E37_RS12590 () | 2477238..2477516 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| C9E37_RS12595 () | 2477518..2478567 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| C9E37_RS12600 () | 2478580..2478939 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E37_RS12605 () | 2478936..2479625 | + | 690 | WP_001059381.1 | antiterminator | - |
| C9E37_RS12630 () | 2480264..2480692 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| C9E37_RS12635 () | 2480689..2480944 | + | 256 | Protein_2418 | DUF3927 family protein | - |
| C9E37_RS12640 () | 2481171..2483021 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| C9E37_RS12645 () | 2483461..2483676 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E37_RS12650 () | 2483681..2484025 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E37_RS12655 () | 2484076..2484609 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E37_RS12660 () | 2484880..2485449 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E37_RS12665 () | 2485449..2485595 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C9E37_RS12675 () | 2485823..2486008 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C9E37_RS12680 () | 2486433..2486660 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| C9E37_RS12685 () | 2486702..2487067 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| C9E37_RS12695 () | 2487357..2487920 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| C9E37_RS12700 () | 2487917..2489578 | + | 1662 | WP_001301491.1 | terminase large subunit | - |
| C9E37_RS12705 () | 2489642..2491579 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| C9E37_RS12710 () | 2491624..2491845 | + | 222 | WP_001063094.1 | hypothetical protein | - |
| C9E37_RS12715 () | 2491791..2494370 | + | 2580 | WP_001304108.1 | phage portal protein | - |
| C9E37_RS12720 () | 2494373..2494699 | + | 327 | WP_000126003.1 | head-tail connector protein | - |
| C9E37_RS12725 () | 2494709..2495059 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| C9E37_RS12730 () | 2495056..2495502 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| C9E37_RS12735 () | 2495499..2495843 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C9E37_RS12740 () | 2495909..2496625 | + | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| C9E37_RS12745 () | 2496640..2497014 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| C9E37_RS12750 () | 2497110..2497319 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| C9E37_RS12755 () | 2497367..2500609 | + | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| C9E37_RS12760 () | 2500602..2500943 | + | 342 | WP_000807954.1 | phage tail protein | - |
| C9E37_RS12765 () | 2500943..2501641 | + | 699 | WP_001179481.1 | phage minor tail protein L | - |
| C9E37_RS12770 () | 2501652..2502395 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| C9E37_RS12775 () | 2502341..2502973 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| C9E37_RS12780 () | 2503315..2504519 | + | 1205 | Protein_2445 | phage tail protein | - |
| C9E37_RS28640 () | 2504610..2506106 | + | 1497 | Protein_2446 | DUF1983 domain-containing protein | - |
| C9E37_RS28645 () | 2506134..2506789 | + | 656 | Protein_2447 | DUF3672 domain-containing protein | - |
| C9E37_RS12790 () | 2506857..2507456 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| C9E37_RS12795 () | 2507521..2508744 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C9E37_RS12800 () | 2508746..2509015 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E37_RS12805 () | 2509129..2509704 | + | 576 | Protein_2451 | hypothetical protein | VF |
| C9E37_RS12815 () | 2510415..2511065 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| C9E37_RS12820 () | 2511215..2511610 | + | 396 | Protein_2453 | IS256 family transposase ISEic2 | Transposase |
| C9E37_RS12825 () | 2511648..2513186 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| C9E37_RS12830 () | 2513236..2513583 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C9E37_RS12835 () | 2513580..2513960 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| C9E37_RS12840 () | 2514055..2514873 | + | 819 | Protein_2457 | IS256 family transposase IS1414 | Transposase |
| C9E37_RS12845 () | 2514923..2515165 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E37_RS12850 () | 2515343..2515894 | - | 552 | Protein_2459 | Putative defective protein IntQ ; Integrase | Integrase |
| C9E37_RS12855 () | 2515882..2517120 | - | 1239 | Protein_2460 | exonuclease | - |
| C9E37_RS12860 () | 2517213..2517401 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| C9E37_RS12865 () | 2517398..2517586 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| C9E37_RS12875 () | 2518151..2518360 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| C9E37_RS12880 () | 2518361..2518999 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| C9E37_RS12885 () | 2519011..2519163 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| C9E37_RS12890 () | 2519456..2519794 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| C9E37_RS12895 () | 2520186..2520428 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| C9E37_RS12900 () | 2520412..2520837 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| C9E37_RS12905 () | 2520906..2521949 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| C9E37_RS12910 () | 2521942..2522403 | + | 462 | WP_000139447.1 | replication protein | - |
| C9E37_RS12915 () | 2522437..2523153 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| C9E37_RS12920 () | 2523186..2523467 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| C9E37_RS12925 () | 2523464..2523691 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| C9E37_RS12930 () | 2523684..2523995 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| C9E37_RS12935 () | 2524123..2524341 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C9E37_RS12940 () | 2524343..2524900 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| C9E37_RS12945 () | 2525191..2525346 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9E37_RS12950 () | 2525466..2525810 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C9E37_RS12955 () | 2525932..2526204 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| C9E37_RS12960 () | 2526206..2527255 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| C9E37_RS12965 () | 2527268..2527573 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E37_RS12970 () | 2527636..2528190 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| C9E37_RS12975 () | 2528415..2528612 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| C9E37_RS12980 () | 2528748..2529461 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| C9E37_RS12995 () | 2529912..2530343 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| C9E37_RS13000 () | 2530340..2530595 | + | 256 | Protein_2486 | DUF3927 family protein | - |
| C9E37_RS13005 () | 2530821..2532671 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| C9E37_RS13010 () | 2533110..2533325 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E37_RS13015 () | 2533330..2533674 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E37_RS13020 () | 2533725..2534258 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E37_RS13025 () | 2534529..2535098 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E37_RS13030 () | 2535098..2535244 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| C9E37_RS13035 () | 2535467..2535652 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C9E37_RS13040 () | 2536178..2536492 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| C9E37_RS13045 () | 2536574..2536798 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| C9E37_RS13055 () | 2537185..2537730 | + | 546 | WP_000867493.1 | terminase small subunit | - |
| C9E37_RS13060 () | 2537705..2539630 | + | 1926 | WP_001027223.1 | phage terminase large subunit family protein | - |
| C9E37_RS13065 () | 2539627..2539833 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C9E37_RS13070 () | 2539830..2541431 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| C9E37_RS13075 () | 2541412..2542731 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| C9E37_RS13080 () | 2542741..2543073 | + | 333 | WP_001295978.1 | head decoration protein | - |
| C9E37_RS13085 () | 2543129..2544154 | + | 1026 | WP_000063265.1 | major capsid protein | - |
| C9E37_RS13090 () | 2544196..2544594 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| C9E37_RS13095 () | 2544606..2544959 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| C9E37_RS13100 () | 2544974..2545507 | + | 534 | WP_000975020.1 | phage tail protein | - |
| C9E37_RS13105 () | 2545504..2545899 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| C9E37_RS13110 () | 2545907..2546659 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| C9E37_RS13115 () | 2546673..2547095 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| C9E37_RS13120 () | 2547122..2547535 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C9E37_RS13125 () | 2547516..2550128 | + | 2613 | WP_137170796.1 | phage tail tape measure protein | - |
| C9E37_RS13130 () | 2550125..2550454 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C9E37_RS13135 () | 2550454..2551152 | + | 699 | WP_001301816.1 | phage minor tail protein L | - |
| C9E37_RS13140 () | 2551163..2551906 | + | 744 | WP_000194798.1 | C40 family peptidase | - |
| C9E37_RS13145 () | 2551852..2552481 | + | 630 | WP_127446151.1 | tail assembly protein | - |
| C9E37_RS13150 () | 2552722..2552937 | + | 216 | WP_137170797.1 | host specificity protein J | - |
| C9E37_RS13155 () | 2552943..2554156 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| C9E37_RS13160 () | 2554198..2557515 | + | 3318 | Protein_2517 | host specificity protein J | - |
| C9E37_RS13165 () | 2557583..2558182 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| C9E37_RS13170 () | 2558247..2559470 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C9E37_RS13175 () | 2559472..2559741 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E37_RS13180 () | 2559855..2560430 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| C9E37_RS13185 () | 2560503..2561132 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| C9E37_RS13190 () | 2561214..2561855 | + | 642 | WP_001143808.1 | hypothetical protein | VF |
| C9E37_RS13200 () | 2562017..2562259 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E37_RS13205 () | 2562391..2563674 | + | 1284 | Protein_2525 | MHS family MFS transporter YdfJ | - |
| C9E37_RS13210 () | 2563763..2565223 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| C9E37_RS13215 () | 2565259..2565462 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C9E37_RS13220 () | 2565639..2566325 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C9E37_RS13225 () | 2566414..2567160 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA1008 | NC_002695 | 2157035..2254487 | 0.001 |