MGE detailed information
MGE type: Genomic_island MGE length: 21219 bp
Accession: NZ_CP028680 Location: 4752444..4773662 Organism: Escherichia coli strain 113 Replicon: chromosome
Accession: NZ_CP028680 Location: 4752444..4773662 Organism: Escherichia coli strain 113 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E42_RS24455 () | 4748170..4748712 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| C9E42_RS24460 () | 4749005..4751155 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| C9E42_RS24465 () | 4751205..4751408 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| C9E42_RS24470 () | 4751419..4752375 | + | 957 | WP_001297640.1 | GTPase | - |
| C9E42_RS24475 () | 4752444..4753802 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| C9E42_RS24480 () | 4753811..4754095 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| C9E42_RS24485 () | 4754373..4756805 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| C9E42_RS24490 () | 4756872..4758341 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| C9E42_RS24495 () | 4758341..4760095 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4760245..4760321 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4760245..4760321 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4760245..4760321 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4760245..4760321 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4760245..4760321 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4760245..4760321 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4760245..4760321 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4760245..4760321 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| C9E42_RS24500 () | 4760316..4760657 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| C9E42_RS24505 () | 4760704..4761867 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| C9E42_RS24510 () | 4761915..4762796 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| C9E42_RS24515 () | 4762893..4763057 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| C9E42_RS24520 () | 4763234..4764646 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| C9E42_RS28535 () | 4764889..4765089 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| C9E42_RS24525 () | 4765094..4765846 | - | 753 | Protein_4676 | Recombination-promoting nuclease RpnD | VF |
| C9E42_RS24530 () | 4766313..4767545 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| C9E42_RS24535 () | 4767586..4768857 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| C9E42_RS24540 () | 4768973..4770124 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| C9E42_RS24545 () | 4770134..4770901 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| C9E42_RS24550 () | 4770898..4771164 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| C9E42_RS24555 () | 4771476..4773662 | + | 2187 | WP_000535053.1 | hypothetical protein | VF |
| C9E42_RS24565 () | 4773928..4774770 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| C9E42_RS24570 () | 4774838..4776016 | + | 1179 | WP_137049517.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |