MGE detailed information
MGE type: Prophage MGE length: 122513 bp
Accession: NZ_CP028671 Location: 2507016..2629528 Organism: Escherichia coli strain 116 Replicon: chromosome
Accession: NZ_CP028671 Location: 2507016..2629528 Organism: Escherichia coli strain 116 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E45_RS12795 () | 2502916..2504136 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| C9E45_RS12800 () | 2504261..2504956 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| C9E45_RS12805 () | 2504909..2506201 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| C9E45_RS12810 () | 2506359..2506973 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| C9E45_RS12815 () | 2507016..2507870 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| C9E45_RS12820 () | 2507872..2508489 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| C9E45_RS12825 () | 2508500..2510923 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E45_RS12830 () | 2510984..2513410 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E45_RS12835 () | 2513609..2513914 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| C9E45_RS12840 () | 2514022..2514732 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| C9E45_RS12845 () | 2514735..2515295 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C9E45_RS12850 () | 2515330..2515671 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| C9E45_RS12855 () | 2515806..2516132 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| C9E45_RS12865 () | 2516902..2517086 | - | 185 | Protein_2459 | DUF3596 domain-containing protein | - |
| C9E45_RS12870 () | 2517121..2517372 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| C9E45_RS12875 () | 2517445..2519916 | - | 2472 | WP_000048458.1 | exonuclease | - |
| C9E45_RS12880 () | 2520009..2520200 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C9E45_RS12885 () | 2520197..2520385 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C9E45_RS12895 () | 2520954..2521172 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| C9E45_RS12900 () | 2521244..2521543 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| C9E45_RS12905 () | 2521896..2522174 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E45_RS12910 () | 2522176..2522367 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C9E45_RS12915 () | 2522388..2522759 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| C9E45_RS12920 () | 2522857..2523159 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| C9E45_RS12925 () | 2523156..2523581 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C9E45_RS12930 () | 2523604..2524566 | + | 963 | WP_000095670.1 | helix-turn-helix domain-containing protein | - |
| C9E45_RS12935 () | 2524573..2525313 | + | 741 | WP_000788936.1 | ATP-binding protein | - |
| C9E45_RS12940 () | 2525339..2526108 | + | 770 | Protein_2473 | DUF1627 domain-containing protein | - |
| C9E45_RS12945 () | 2526124..2526519 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| C9E45_RS12950 () | 2526576..2527160 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| C9E45_RS12955 () | 2527276..2527380 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| C9E45_RS12960 () | 2527626..2527781 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| C9E45_RS12965 () | 2527949..2528227 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| C9E45_RS12970 () | 2528229..2529278 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| C9E45_RS12975 () | 2529291..2529650 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E45_RS12980 () | 2529647..2530336 | + | 690 | WP_001059381.1 | antiterminator | - |
| C9E45_RS13005 () | 2530973..2531401 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| C9E45_RS13010 () | 2531398..2531653 | + | 256 | Protein_2483 | DUF3927 family protein | - |
| C9E45_RS13015 () | 2531880..2533730 | + | 1851 | WP_024748470.1 | SASA family carbohydrate esterase | - |
| C9E45_RS13020 () | 2534170..2534385 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E45_RS13025 () | 2534390..2534734 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E45_RS13030 () | 2534785..2535318 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E45_RS13035 () | 2535588..2536157 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E45_RS13040 () | 2536157..2536303 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C9E45_RS13050 () | 2536531..2536716 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C9E45_RS13055 () | 2537141..2537368 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| C9E45_RS13060 () | 2537410..2537775 | + | 366 | WP_015994246.1 | HNH endonuclease | - |
| C9E45_RS13070 () | 2538065..2538628 | + | 564 | WP_001303051.1 | terminase small subunit | - |
| C9E45_RS13075 () | 2538625..2540286 | + | 1662 | WP_024748457.1 | terminase large subunit | - |
| C9E45_RS13080 () | 2540350..2542287 | + | 1938 | WP_000172999.1 | phage major capsid protein | - |
| C9E45_RS13085 () | 2542332..2542553 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| C9E45_RS13090 () | 2542499..2545084 | + | 2586 | WP_137049511.1 | phage portal protein | - |
| C9E45_RS13095 () | 2545081..2545407 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| C9E45_RS13100 () | 2545417..2545767 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| C9E45_RS13105 () | 2545764..2546210 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| C9E45_RS13110 () | 2546207..2546551 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C9E45_RS13115 () | 2546610..2547326 | + | 717 | WP_001275508.1 | tail protein | - |
| C9E45_RS13120 () | 2547332..2547706 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| C9E45_RS13125 () | 2547802..2548011 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C9E45_RS13130 () | 2548064..2551306 | + | 3243 | WP_064261924.1 | phage tail tape measure protein | - |
| C9E45_RS13135 () | 2551299..2551640 | + | 342 | WP_000807954.1 | phage tail protein | - |
| C9E45_RS13140 () | 2551640..2552338 | + | 699 | WP_001303038.1 | phage minor tail protein L | - |
| C9E45_RS13145 () | 2552349..2553092 | + | 744 | WP_046671488.1 | C40 family peptidase | - |
| C9E45_RS13150 () | 2553038..2553670 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| C9E45_RS13155 () | 2554013..2555188 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| C9E45_RS13160 () | 2555140..2557485 | + | 2346 | WP_129137390.1 | host specificity protein J | - |
| C9E45_RS13165 () | 2557553..2558152 | + | 600 | WP_001228304.1 | Outer membrane protein X | VF |
| C9E45_RS13170 () | 2558304..2559617 | + | 1314 | WP_024748516.1 | ISNCY family transposase KIS | Transposase |
| C9E45_RS13175 () | 2559619..2559888 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E45_RS13180 () | 2560001..2560575 | + | 575 | Protein_2515 | hypothetical protein | VF |
| C9E45_RS13185 () | 2560915..2562240 | - | 1326 | WP_001025672.1 | hypothetical protein | VF |
| C9E45_RS13195 () | 2562901..2563815 | - | 915 | Protein_2517 | Tyrosine recombinase XerD ; Integrase | Integrase |
| C9E45_RS13200 () | 2563829..2563939 | + | 111 | Protein_2518 | type III effector | - |
| C9E45_RS13205 () | 2563986..2564620 | - | 635 | Protein_2519 | IS256 family transposase ISEic2 | Transposase |
| C9E45_RS13210 () | 2564905..2566443 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| C9E45_RS13215 () | 2566493..2566840 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C9E45_RS13220 () | 2566837..2567217 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| C9E45_RS13225 () | 2567557..2567835 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| C9E45_RS13230 () | 2568263..2568409 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| C9E45_RS13235 () | 2568546..2569193 | - | 648 | WP_001303944.1 | hypothetical protein | VF |
| C9E45_RS13240 () | 2569377..2569967 | + | 591 | WP_001144877.1 | hypothetical protein | VF |
| C9E45_RS13245 () | 2570186..2571242 | - | 1057 | Protein_2527 | IS630 family transposase | - |
| C9E45_RS13250 () | 2571474..2572124 | + | 651 | WP_001345079.1 | hypothetical protein | VF |
| C9E45_RS13255 () | 2572283..2572518 | + | 236 | Protein_2529 | IS3 family transposase | - |
| C9E45_RS13265 () | 2573253..2573378 | + | 126 | Protein_2530 | outer membrane protein OmpW | - |
| C9E45_RS13270 () | 2573424..2574554 | - | 1131 | WP_001500821.1 | hypothetical protein ; Integrase | Integrase |
| C9E45_RS13275 () | 2574532..2574780 | - | 249 | WP_000113189.1 | excisionase | - |
| C9E45_RS13280 () | 2574845..2577289 | - | 2445 | WP_000102181.1 | exonuclease | - |
| C9E45_RS13285 () | 2577382..2577570 | - | 189 | WP_000092782.1 | DUF1482 family protein | - |
| C9E45_RS13290 () | 2577567..2577755 | - | 189 | WP_000450222.1 | cell division inhibitor | - |
| C9E45_RS13300 () | 2578320..2578529 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| C9E45_RS13305 () | 2578530..2579168 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| C9E45_RS13310 () | 2579180..2579332 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| C9E45_RS13315 () | 2579625..2579963 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| C9E45_RS13320 () | 2580355..2580597 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| C9E45_RS13325 () | 2580581..2581006 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| C9E45_RS13330 () | 2581075..2582118 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| C9E45_RS13335 () | 2582111..2582572 | + | 462 | WP_000139447.1 | replication protein | - |
| C9E45_RS13340 () | 2582606..2583322 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| C9E45_RS13345 () | 2583355..2583636 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| C9E45_RS13350 () | 2583633..2583860 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| C9E45_RS13355 () | 2583853..2584164 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| C9E45_RS13360 () | 2584292..2584510 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C9E45_RS13365 () | 2584512..2585069 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| - () | 2585290..2585348 | - | 59 | - | - | Antitoxin Detail |
| C9E45_RS13370 () | 2585360..2585515 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C9E45_RS13375 () | 2585635..2585979 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C9E45_RS13380 () | 2586101..2586373 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| C9E45_RS13385 () | 2586375..2587424 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| C9E45_RS13390 () | 2587437..2587742 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E45_RS13395 () | 2587805..2588359 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| C9E45_RS13400 () | 2588584..2588781 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| C9E45_RS13405 () | 2588917..2589630 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| C9E45_RS13420 () | 2590081..2590512 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| C9E45_RS13425 () | 2590509..2590764 | + | 256 | Protein_2559 | DUF3927 family protein | - |
| C9E45_RS13430 () | 2590990..2592840 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| C9E45_RS13435 () | 2593280..2593495 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E45_RS13440 () | 2593500..2593844 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E45_RS13445 () | 2593895..2594428 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E45_RS13450 () | 2594699..2595268 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E45_RS13455 () | 2595268..2595414 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| C9E45_RS13460 () | 2595637..2595822 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C9E45_RS13465 () | 2596348..2596662 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| C9E45_RS13470 () | 2596744..2596968 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| C9E45_RS13480 () | 2597355..2597900 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| C9E45_RS13485 () | 2597875..2599800 | + | 1926 | WP_024748469.1 | phage terminase large subunit family protein | - |
| C9E45_RS13490 () | 2599797..2600003 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C9E45_RS13495 () | 2600000..2601601 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| C9E45_RS13500 () | 2601582..2602901 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| C9E45_RS13505 () | 2602911..2603243 | + | 333 | WP_001295978.1 | head decoration protein | - |
| C9E45_RS13510 () | 2603299..2604324 | + | 1026 | WP_024748468.1 | major capsid protein | - |
| C9E45_RS13515 () | 2604366..2604764 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| C9E45_RS13520 () | 2604776..2605129 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| C9E45_RS13525 () | 2605144..2605677 | + | 534 | WP_000975020.1 | phage tail protein | - |
| C9E45_RS13530 () | 2605674..2606069 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| C9E45_RS13535 () | 2606077..2606829 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| C9E45_RS13540 () | 2606843..2607265 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| C9E45_RS13545 () | 2607292..2607705 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C9E45_RS13550 () | 2607686..2610298 | + | 2613 | WP_000081804.1 | phage tail tape measure protein | - |
| C9E45_RS13555 () | 2610295..2610624 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C9E45_RS13560 () | 2610624..2611322 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| C9E45_RS13565 () | 2611333..2612076 | + | 744 | WP_000194801.1 | C40 family peptidase | - |
| C9E45_RS13570 () | 2612022..2612654 | + | 633 | WP_129137391.1 | tail assembly protein | - |
| C9E45_RS13575 () | 2612901..2616380 | + | 3480 | WP_000514788.1 | host specificity protein J | - |
| C9E45_RS13580 () | 2616448..2617047 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| C9E45_RS13585 () | 2617112..2618425 | + | 1314 | WP_137049508.1 | ISNCY family transposase KIS | Transposase |
| C9E45_RS13590 () | 2618427..2618696 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E45_RS13595 () | 2618810..2619385 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| C9E45_RS13600 () | 2619458..2620087 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| C9E45_RS13605 () | 2620169..2620810 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| C9E45_RS13615 () | 2620972..2621214 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E45_RS13620 () | 2621346..2622629 | + | 1284 | Protein_2596 | MHS family MFS transporter YdfJ | - |
| C9E45_RS13625 () | 2622718..2624178 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| C9E45_RS13630 () | 2624214..2624417 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C9E45_RS13635 () | 2624594..2625280 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C9E45_RS13640 () | 2625369..2626115 | - | 747 | WP_000636568.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| C9E45_RS13645 () | 2626252..2628297 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| C9E45_RS13650 () | 2628342..2628860 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| C9E45_RS13655 () | 2629136..2629528 | + | 393 | WP_000671724.1 | YdeI family stress tolerance OB fold protein | - |
| C9E45_RS13660 () | 2629783..2630673 | + | 891 | WP_000592852.1 | diguanylate cyclase DgcZ | - |
| C9E45_RS28660 () | 2630788..2630892 | - | 105 | WP_211180496.1 | protein MgtT | - |
| C9E45_RS13665 () | 2630892..2630987 | - | 96 | WP_000901365.1 | protein MgtS | - |
| C9E45_RS13670 () | 2631095..2632066 | - | 972 | WP_001310251.1 | transcriptional regulator FtrA | - |
| C9E45_RS13675 () | 2632161..2632556 | + | 396 | WP_001271101.1 | rhodanese | - |
| C9E45_RS13680 () | 2632597..2633784 | - | 1188 | WP_001054199.1 | efflux MFS transporter YdeE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|