MGE detailed information
MGE type: Prophage MGE length: 122512 bp
Accession: NZ_CP028665 Location: 2507004..2629515 Organism: Escherichia coli strain 118 Replicon: chromosome
Accession: NZ_CP028665 Location: 2507004..2629515 Organism: Escherichia coli strain 118 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E47_RS12795 () | 2502904..2504124 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| C9E47_RS12800 () | 2504249..2504944 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| C9E47_RS12805 () | 2504897..2506189 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| C9E47_RS12810 () | 2506347..2506961 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| C9E47_RS12815 () | 2507004..2507858 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| C9E47_RS12820 () | 2507860..2508477 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| C9E47_RS12825 () | 2508488..2510911 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E47_RS12830 () | 2510972..2513398 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E47_RS12835 () | 2513597..2513902 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| C9E47_RS12840 () | 2514010..2514720 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| C9E47_RS12845 () | 2514723..2515283 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C9E47_RS12850 () | 2515318..2515659 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| C9E47_RS12855 () | 2515794..2516120 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| C9E47_RS12865 () | 2516890..2517074 | - | 185 | Protein_2459 | DUF3596 domain-containing protein | - |
| C9E47_RS12870 () | 2517109..2517360 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| C9E47_RS12875 () | 2517433..2519904 | - | 2472 | WP_000048458.1 | exonuclease | - |
| C9E47_RS12880 () | 2519997..2520188 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C9E47_RS12885 () | 2520185..2520373 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C9E47_RS12895 () | 2520942..2521160 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| C9E47_RS12900 () | 2521232..2521531 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| C9E47_RS12905 () | 2521884..2522162 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E47_RS12910 () | 2522164..2522355 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C9E47_RS12915 () | 2522376..2522747 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| C9E47_RS12920 () | 2522845..2523147 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| C9E47_RS12925 () | 2523144..2523569 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C9E47_RS12930 () | 2523592..2524554 | + | 963 | WP_000095670.1 | helix-turn-helix domain-containing protein | - |
| C9E47_RS12935 () | 2524561..2525301 | + | 741 | WP_000788936.1 | ATP-binding protein | - |
| C9E47_RS12940 () | 2525327..2526096 | + | 770 | Protein_2473 | DUF1627 domain-containing protein | - |
| C9E47_RS12945 () | 2526112..2526507 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| C9E47_RS12950 () | 2526564..2527148 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| C9E47_RS12955 () | 2527264..2527368 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| C9E47_RS12960 () | 2527614..2527769 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| C9E47_RS12965 () | 2527937..2528215 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| C9E47_RS12970 () | 2528217..2529266 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| C9E47_RS12975 () | 2529279..2529638 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E47_RS12980 () | 2529635..2530324 | + | 690 | WP_001059381.1 | antiterminator | - |
| C9E47_RS13005 () | 2530961..2531389 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| C9E47_RS13010 () | 2531386..2531641 | + | 256 | Protein_2483 | DUF3927 family protein | - |
| C9E47_RS13015 () | 2531868..2533718 | + | 1851 | WP_024748470.1 | SASA family carbohydrate esterase | - |
| C9E47_RS13020 () | 2534158..2534373 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E47_RS13025 () | 2534378..2534722 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E47_RS13030 () | 2534773..2535306 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E47_RS13035 () | 2535576..2536145 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E47_RS13040 () | 2536145..2536291 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C9E47_RS13050 () | 2536519..2536704 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C9E47_RS13055 () | 2537129..2537356 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| C9E47_RS13060 () | 2537398..2537763 | + | 366 | WP_015994246.1 | HNH endonuclease | - |
| C9E47_RS13070 () | 2538053..2538616 | + | 564 | WP_001303051.1 | terminase small subunit | - |
| C9E47_RS13075 () | 2538613..2540274 | + | 1662 | WP_024748457.1 | terminase large subunit | - |
| C9E47_RS13080 () | 2540338..2542275 | + | 1938 | WP_000172999.1 | phage major capsid protein | - |
| C9E47_RS13085 () | 2542320..2542541 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| C9E47_RS13090 () | 2542487..2544988 | + | 2502 | WP_000267292.1 | phage portal protein | - |
| C9E47_RS13095 () | 2545068..2545394 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| C9E47_RS13100 () | 2545404..2545754 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| C9E47_RS13105 () | 2545751..2546197 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| C9E47_RS13110 () | 2546194..2546538 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C9E47_RS13115 () | 2546597..2547313 | + | 717 | WP_001275508.1 | tail protein | - |
| C9E47_RS13120 () | 2547319..2547693 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| C9E47_RS13125 () | 2547789..2547998 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C9E47_RS13130 () | 2548051..2551293 | + | 3243 | WP_064261924.1 | phage tail tape measure protein | - |
| C9E47_RS13135 () | 2551286..2551627 | + | 342 | WP_000807954.1 | phage tail protein | - |
| C9E47_RS13140 () | 2551627..2552325 | + | 699 | WP_001303038.1 | phage minor tail protein L | - |
| C9E47_RS13145 () | 2552336..2553079 | + | 744 | WP_046671488.1 | C40 family peptidase | - |
| C9E47_RS13150 () | 2553025..2553657 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| C9E47_RS13155 () | 2554000..2555175 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| C9E47_RS13160 () | 2555127..2557472 | + | 2346 | WP_129137390.1 | host specificity protein J | - |
| C9E47_RS13165 () | 2557540..2558139 | + | 600 | WP_001228304.1 | Outer membrane protein X | VF |
| C9E47_RS13170 () | 2558291..2559604 | + | 1314 | WP_024748516.1 | ISNCY family transposase KIS | Transposase |
| C9E47_RS13175 () | 2559606..2559875 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E47_RS13180 () | 2559988..2560562 | + | 575 | Protein_2515 | hypothetical protein | VF |
| C9E47_RS13185 () | 2560902..2562227 | - | 1326 | WP_001025672.1 | hypothetical protein | VF |
| C9E47_RS13195 () | 2562888..2563802 | - | 915 | Protein_2517 | Tyrosine recombinase XerD ; Integrase | Integrase |
| C9E47_RS13200 () | 2563816..2563926 | + | 111 | Protein_2518 | type III effector | - |
| C9E47_RS13205 () | 2563973..2564607 | - | 635 | Protein_2519 | IS256 family transposase ISEic2 | Transposase |
| C9E47_RS13210 () | 2564892..2566430 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| C9E47_RS13215 () | 2566480..2566827 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C9E47_RS13220 () | 2566824..2567204 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| C9E47_RS13225 () | 2567544..2567822 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| C9E47_RS13230 () | 2568250..2568396 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| C9E47_RS13235 () | 2568533..2569180 | - | 648 | WP_001303944.1 | hypothetical protein | VF |
| C9E47_RS13240 () | 2569364..2569954 | + | 591 | WP_001144877.1 | hypothetical protein | VF |
| C9E47_RS13245 () | 2570173..2571229 | - | 1057 | Protein_2527 | IS630 family transposase | - |
| C9E47_RS13250 () | 2571461..2572111 | + | 651 | WP_001345079.1 | hypothetical protein | VF |
| C9E47_RS13255 () | 2572270..2572505 | + | 236 | Protein_2529 | IS3 family transposase | - |
| C9E47_RS13265 () | 2573240..2573365 | + | 126 | Protein_2530 | outer membrane protein OmpW | - |
| C9E47_RS13270 () | 2573411..2574541 | - | 1131 | WP_001500821.1 | hypothetical protein ; Integrase | Integrase |
| C9E47_RS13275 () | 2574519..2574767 | - | 249 | WP_000113189.1 | excisionase | - |
| C9E47_RS13280 () | 2574832..2577276 | - | 2445 | WP_000102181.1 | exonuclease | - |
| C9E47_RS13285 () | 2577369..2577557 | - | 189 | WP_000092782.1 | DUF1482 family protein | - |
| C9E47_RS13290 () | 2577554..2577742 | - | 189 | WP_000450222.1 | cell division inhibitor | - |
| C9E47_RS13300 () | 2578307..2578516 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| C9E47_RS13305 () | 2578517..2579155 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| C9E47_RS13310 () | 2579167..2579319 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| C9E47_RS13315 () | 2579612..2579950 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| C9E47_RS13320 () | 2580342..2580584 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| C9E47_RS13325 () | 2580568..2580993 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| C9E47_RS13330 () | 2581062..2582105 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| C9E47_RS13335 () | 2582098..2582559 | + | 462 | WP_000139447.1 | replication protein | - |
| C9E47_RS13340 () | 2582593..2583309 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| C9E47_RS13345 () | 2583342..2583623 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| C9E47_RS13350 () | 2583620..2583847 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| C9E47_RS13355 () | 2583840..2584151 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| C9E47_RS13360 () | 2584279..2584497 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C9E47_RS13365 () | 2584499..2585056 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| - () | 2585277..2585335 | - | 59 | - | - | Antitoxin Detail |
| C9E47_RS13370 () | 2585347..2585502 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C9E47_RS13375 () | 2585622..2585966 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C9E47_RS13380 () | 2586088..2586360 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| C9E47_RS13385 () | 2586362..2587411 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| C9E47_RS13390 () | 2587424..2587729 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E47_RS13395 () | 2587792..2588346 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| C9E47_RS13400 () | 2588571..2588768 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| C9E47_RS13405 () | 2588904..2589617 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| C9E47_RS13420 () | 2590068..2590499 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| C9E47_RS13425 () | 2590496..2590751 | + | 256 | Protein_2559 | DUF3927 family protein | - |
| C9E47_RS13430 () | 2590977..2592827 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| C9E47_RS13435 () | 2593267..2593482 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E47_RS13440 () | 2593487..2593831 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E47_RS13445 () | 2593882..2594415 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E47_RS13450 () | 2594686..2595255 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E47_RS13455 () | 2595255..2595401 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| C9E47_RS13460 () | 2595624..2595809 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C9E47_RS13465 () | 2596335..2596649 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| C9E47_RS13470 () | 2596731..2596955 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| C9E47_RS13480 () | 2597342..2597887 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| C9E47_RS13485 () | 2597862..2599787 | + | 1926 | WP_024748469.1 | phage terminase large subunit family protein | - |
| C9E47_RS13490 () | 2599784..2599990 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C9E47_RS13495 () | 2599987..2601588 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| C9E47_RS13500 () | 2601569..2602888 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| C9E47_RS13505 () | 2602898..2603230 | + | 333 | WP_001295978.1 | head decoration protein | - |
| C9E47_RS13510 () | 2603286..2604311 | + | 1026 | WP_024748468.1 | major capsid protein | - |
| C9E47_RS13515 () | 2604353..2604751 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| C9E47_RS13520 () | 2604763..2605116 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| C9E47_RS13525 () | 2605131..2605664 | + | 534 | WP_000975020.1 | phage tail protein | - |
| C9E47_RS13530 () | 2605661..2606056 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| C9E47_RS13535 () | 2606064..2606816 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| C9E47_RS13540 () | 2606830..2607252 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| C9E47_RS13545 () | 2607279..2607692 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C9E47_RS13550 () | 2607673..2610285 | + | 2613 | WP_000081804.1 | phage tail tape measure protein | - |
| C9E47_RS13555 () | 2610282..2610611 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C9E47_RS13560 () | 2610611..2611309 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| C9E47_RS13565 () | 2611320..2612063 | + | 744 | WP_000194801.1 | C40 family peptidase | - |
| C9E47_RS13570 () | 2612009..2612641 | + | 633 | WP_129137391.1 | tail assembly protein | - |
| C9E47_RS13575 () | 2612888..2616367 | + | 3480 | WP_000514788.1 | host specificity protein J | - |
| C9E47_RS13580 () | 2616435..2617034 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| C9E47_RS13585 () | 2617099..2618412 | + | 1314 | WP_137049508.1 | ISNCY family transposase KIS | Transposase |
| C9E47_RS13590 () | 2618414..2618683 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E47_RS13595 () | 2618797..2619372 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| C9E47_RS13600 () | 2619445..2620074 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| C9E47_RS13605 () | 2620156..2620797 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| C9E47_RS13615 () | 2620959..2621201 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E47_RS13620 () | 2621333..2622616 | + | 1284 | Protein_2596 | MHS family MFS transporter YdfJ | - |
| C9E47_RS13625 () | 2622705..2624165 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| C9E47_RS13630 () | 2624201..2624404 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C9E47_RS13635 () | 2624581..2625267 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C9E47_RS13640 () | 2625356..2626102 | - | 747 | WP_000636568.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| C9E47_RS13645 () | 2626239..2628284 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| C9E47_RS13650 () | 2628329..2628847 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| C9E47_RS13655 () | 2629123..2629515 | + | 393 | WP_000671724.1 | YdeI family stress tolerance OB fold protein | - |
| C9E47_RS13660 () | 2629770..2630660 | + | 891 | WP_000592852.1 | diguanylate cyclase DgcZ | - |
| C9E47_RS28660 () | 2630775..2630879 | - | 105 | WP_211180496.1 | protein MgtT | - |
| C9E47_RS13665 () | 2630879..2630974 | - | 96 | WP_000901365.1 | protein MgtS | - |
| C9E47_RS13670 () | 2631082..2632053 | - | 972 | WP_001310251.1 | transcriptional regulator FtrA | - |
| C9E47_RS13675 () | 2632148..2632543 | + | 396 | WP_001271101.1 | rhodanese | - |
| C9E47_RS13680 () | 2632584..2633771 | - | 1188 | WP_001054199.1 | efflux MFS transporter YdeE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|