MGE detailed information
MGE type: Prophage MGE length: 122512 bp
Accession: NZ_CP028662 Location: 2507003..2629514 Organism: Escherichia coli strain 119 Replicon: chromosome
Accession: NZ_CP028662 Location: 2507003..2629514 Organism: Escherichia coli strain 119 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E48_RS12795 () | 2502903..2504123 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| C9E48_RS12800 () | 2504248..2504943 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| C9E48_RS12805 () | 2504896..2506188 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| C9E48_RS12810 () | 2506346..2506960 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| C9E48_RS12815 () | 2507003..2507857 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| C9E48_RS12820 () | 2507859..2508476 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| C9E48_RS12825 () | 2508487..2510910 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E48_RS12830 () | 2510971..2513397 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E48_RS12835 () | 2513596..2513901 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| C9E48_RS12840 () | 2514009..2514719 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| C9E48_RS12845 () | 2514722..2515282 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C9E48_RS12850 () | 2515317..2515658 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| C9E48_RS12855 () | 2515793..2516119 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| C9E48_RS12865 () | 2516889..2517073 | - | 185 | Protein_2459 | DUF3596 domain-containing protein | - |
| C9E48_RS12870 () | 2517108..2517359 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| C9E48_RS12875 () | 2517432..2519903 | - | 2472 | WP_000048458.1 | exonuclease | - |
| C9E48_RS12880 () | 2519996..2520187 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C9E48_RS12885 () | 2520184..2520372 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C9E48_RS12895 () | 2520941..2521159 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| C9E48_RS12900 () | 2521231..2521530 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| C9E48_RS12905 () | 2521883..2522161 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E48_RS12910 () | 2522163..2522354 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C9E48_RS12915 () | 2522375..2522746 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| C9E48_RS12920 () | 2522844..2523146 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| C9E48_RS12925 () | 2523143..2523568 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C9E48_RS12930 () | 2523591..2524553 | + | 963 | WP_000095670.1 | helix-turn-helix domain-containing protein | - |
| C9E48_RS12935 () | 2524560..2525300 | + | 741 | WP_000788936.1 | ATP-binding protein | - |
| C9E48_RS12940 () | 2525326..2526095 | + | 770 | Protein_2473 | DUF1627 domain-containing protein | - |
| C9E48_RS12945 () | 2526111..2526506 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| C9E48_RS12950 () | 2526563..2527147 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| C9E48_RS12955 () | 2527263..2527367 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| C9E48_RS12960 () | 2527613..2527768 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| C9E48_RS12965 () | 2527936..2528214 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| C9E48_RS12970 () | 2528216..2529265 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| C9E48_RS12975 () | 2529278..2529637 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E48_RS12980 () | 2529634..2530323 | + | 690 | WP_001059381.1 | antiterminator | - |
| C9E48_RS13005 () | 2530960..2531388 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| C9E48_RS13010 () | 2531385..2531640 | + | 256 | Protein_2483 | DUF3927 family protein | - |
| C9E48_RS13015 () | 2531867..2533717 | + | 1851 | WP_024748470.1 | SASA family carbohydrate esterase | - |
| C9E48_RS13020 () | 2534157..2534372 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E48_RS13025 () | 2534377..2534721 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E48_RS13030 () | 2534772..2535305 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E48_RS13035 () | 2535575..2536144 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E48_RS13040 () | 2536144..2536290 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C9E48_RS13050 () | 2536518..2536703 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C9E48_RS13055 () | 2537128..2537355 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| C9E48_RS13060 () | 2537397..2537762 | + | 366 | WP_015994246.1 | HNH endonuclease | - |
| C9E48_RS13070 () | 2538052..2538615 | + | 564 | WP_001303051.1 | terminase small subunit | - |
| C9E48_RS13075 () | 2538612..2540273 | + | 1662 | WP_024748457.1 | terminase large subunit | - |
| C9E48_RS13080 () | 2540337..2542274 | + | 1938 | WP_000172999.1 | phage major capsid protein | - |
| C9E48_RS13085 () | 2542319..2542540 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| C9E48_RS13090 () | 2542486..2544987 | + | 2502 | WP_000267292.1 | phage portal protein | - |
| C9E48_RS13095 () | 2545067..2545393 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| C9E48_RS13100 () | 2545403..2545753 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| C9E48_RS13105 () | 2545750..2546196 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| C9E48_RS13110 () | 2546193..2546537 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C9E48_RS13115 () | 2546596..2547312 | + | 717 | WP_001275508.1 | tail protein | - |
| C9E48_RS13120 () | 2547318..2547692 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| C9E48_RS13125 () | 2547788..2547997 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C9E48_RS13130 () | 2548050..2551292 | + | 3243 | WP_064261924.1 | phage tail tape measure protein | - |
| C9E48_RS13135 () | 2551285..2551626 | + | 342 | WP_000807954.1 | phage tail protein | - |
| C9E48_RS13140 () | 2551626..2552324 | + | 699 | WP_001303038.1 | phage minor tail protein L | - |
| C9E48_RS13145 () | 2552335..2553078 | + | 744 | WP_046671488.1 | C40 family peptidase | - |
| C9E48_RS13150 () | 2553024..2553656 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| C9E48_RS13155 () | 2553999..2555174 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| C9E48_RS13160 () | 2555126..2557471 | + | 2346 | WP_129137390.1 | host specificity protein J | - |
| C9E48_RS13165 () | 2557539..2558138 | + | 600 | WP_001228304.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| C9E48_RS13170 () | 2558290..2559603 | + | 1314 | WP_024748516.1 | phage tail protein | - |
| C9E48_RS13175 () | 2559605..2559874 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E48_RS13180 () | 2559987..2560561 | + | 575 | Protein_2515 | DUF1076 domain-containing protein | - |
| C9E48_RS13185 () | 2560901..2562226 | - | 1326 | WP_001025672.1 | type III secretion system effector NleA | - |
| C9E48_RS13195 () | 2562887..2563801 | - | 915 | Protein_2517 | tyrosine-type recombinase/integrase | - |
| C9E48_RS13200 () | 2563815..2563925 | + | 111 | Protein_2518 | type III effector | - |
| C9E48_RS13205 () | 2563972..2564606 | - | 635 | Protein_2519 | transposase | - |
| C9E48_RS13210 () | 2564891..2566429 | - | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| C9E48_RS13215 () | 2566479..2566826 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C9E48_RS13220 () | 2566823..2567203 | - | 381 | WP_001171554.1 | IS66 family insertion sequence hypothetical protein | - |
| C9E48_RS13225 () | 2567543..2567821 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| C9E48_RS13230 () | 2568249..2568395 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| C9E48_RS13235 () | 2568532..2569179 | - | 648 | WP_001303944.1 | T3SS effector E3 ubiquitin-protein ligase NleG | - |
| C9E48_RS13240 () | 2569363..2569953 | + | 591 | WP_001144877.1 | T3SS effector guanine nucleotide exchange factor EspM1 | - |
| C9E48_RS13245 () | 2570172..2571228 | - | 1057 | Protein_2527 | IS630 family transposase | - |
| C9E48_RS13250 () | 2571460..2572110 | + | 651 | WP_001345079.1 | DUF1076 domain-containing protein | - |
| C9E48_RS13255 () | 2572269..2572504 | + | 236 | Protein_2529 | IS3 family transposase | - |
| C9E48_RS13265 () | 2573239..2573364 | + | 126 | Protein_2530 | outer membrane protein OmpW | - |
| C9E48_RS13270 () | 2573410..2574540 | - | 1131 | WP_001500821.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| C9E48_RS13275 () | 2574518..2574766 | - | 249 | WP_000113189.1 | excisionase | - |
| C9E48_RS13280 () | 2574831..2577275 | - | 2445 | WP_000102181.1 | exonuclease | - |
| C9E48_RS13285 () | 2577368..2577556 | - | 189 | WP_000092782.1 | DUF1482 family protein | - |
| C9E48_RS13290 () | 2577553..2577741 | - | 189 | WP_000450222.1 | cell division inhibitor | - |
| C9E48_RS13300 () | 2578306..2578515 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| C9E48_RS13305 () | 2578516..2579154 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| C9E48_RS13310 () | 2579166..2579318 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| C9E48_RS13315 () | 2579611..2579949 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| C9E48_RS13320 () | 2580341..2580583 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| C9E48_RS13325 () | 2580567..2580992 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| C9E48_RS13330 () | 2581061..2582104 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| C9E48_RS13335 () | 2582097..2582558 | + | 462 | WP_000139447.1 | replication protein | - |
| C9E48_RS13340 () | 2582592..2583308 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| C9E48_RS13345 () | 2583341..2583622 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| C9E48_RS13350 () | 2583619..2583846 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| C9E48_RS13355 () | 2583839..2584150 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| C9E48_RS13360 () | 2584278..2584496 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C9E48_RS13365 () | 2584498..2585055 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| - () | 2585276..2585334 | - | 59 | - | - | Antitoxin Detail |
| C9E48_RS13370 () | 2585346..2585501 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C9E48_RS13375 () | 2585621..2585965 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C9E48_RS13380 () | 2586087..2586359 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| C9E48_RS13385 () | 2586361..2587410 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| C9E48_RS13390 () | 2587423..2587728 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E48_RS13395 () | 2587791..2588345 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| C9E48_RS13400 () | 2588570..2588767 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| C9E48_RS13405 () | 2588903..2589616 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| C9E48_RS13420 () | 2590067..2590498 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| C9E48_RS13425 () | 2590495..2590750 | + | 256 | Protein_2559 | DUF3927 family protein | - |
| C9E48_RS13430 () | 2590976..2592826 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| C9E48_RS13435 () | 2593266..2593481 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E48_RS13440 () | 2593486..2593830 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E48_RS13445 () | 2593881..2594414 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E48_RS13450 () | 2594685..2595254 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E48_RS13455 () | 2595254..2595400 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| C9E48_RS13460 () | 2595623..2595808 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C9E48_RS13465 () | 2596334..2596648 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| C9E48_RS13470 () | 2596730..2596954 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| C9E48_RS13480 () | 2597341..2597886 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| C9E48_RS13485 () | 2597861..2599786 | + | 1926 | WP_024748469.1 | phage terminase large subunit family protein | - |
| C9E48_RS13490 () | 2599783..2599989 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C9E48_RS13495 () | 2599986..2601587 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| C9E48_RS13500 () | 2601568..2602887 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| C9E48_RS13505 () | 2602897..2603229 | + | 333 | WP_001295978.1 | head decoration protein | - |
| C9E48_RS13510 () | 2603285..2604310 | + | 1026 | WP_024748468.1 | major capsid protein | - |
| C9E48_RS13515 () | 2604352..2604750 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| C9E48_RS13520 () | 2604762..2605115 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| C9E48_RS13525 () | 2605130..2605663 | + | 534 | WP_000975020.1 | phage tail protein | - |
| C9E48_RS13530 () | 2605660..2606055 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| C9E48_RS13535 () | 2606063..2606815 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| C9E48_RS13540 () | 2606829..2607251 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| C9E48_RS13545 () | 2607278..2607691 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C9E48_RS13550 () | 2607672..2610284 | + | 2613 | WP_000081804.1 | phage tail tape measure protein | - |
| C9E48_RS13555 () | 2610281..2610610 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C9E48_RS13560 () | 2610610..2611308 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| C9E48_RS13565 () | 2611319..2612062 | + | 744 | WP_000194801.1 | C40 family peptidase | - |
| C9E48_RS13570 () | 2612008..2612640 | + | 633 | WP_129137391.1 | tail assembly protein | - |
| C9E48_RS13575 () | 2612887..2616366 | + | 3480 | WP_000514788.1 | host specificity protein J | - |
| C9E48_RS13580 () | 2616434..2617033 | + | 600 | WP_001230508.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| C9E48_RS13585 () | 2617098..2618411 | + | 1314 | WP_137049508.1 | phage tail protein | - |
| C9E48_RS13590 () | 2618413..2618682 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E48_RS13595 () | 2618796..2619371 | + | 576 | WP_001131658.1 | DUF1076 domain-containing protein | - |
| C9E48_RS13600 () | 2619444..2620073 | + | 630 | WP_001356599.1 | DUF1076 domain-containing protein | - |
| C9E48_RS13605 () | 2620155..2620796 | + | 642 | WP_001143804.1 | DUF1076 domain-containing protein | - |
| C9E48_RS13615 () | 2620958..2621200 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E48_RS13620 () | 2621332..2622615 | + | 1284 | Protein_2596 | MHS family MFS transporter YdfJ | - |
| C9E48_RS13625 () | 2622704..2624164 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| C9E48_RS13630 () | 2624200..2624403 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C9E48_RS13635 () | 2624580..2625266 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C9E48_RS13640 () | 2625355..2626101 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| C9E48_RS13645 () | 2626238..2628283 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| C9E48_RS13650 () | 2628328..2628846 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| C9E48_RS13655 () | 2629122..2629514 | + | 393 | WP_000671724.1 | YdeI family stress tolerance OB fold protein | - |
| C9E48_RS13660 () | 2629769..2630659 | + | 891 | WP_000592852.1 | diguanylate cyclase DgcZ | - |
| C9E48_RS28670 () | 2630774..2630878 | - | 105 | WP_211180496.1 | protein MgtT | - |
| C9E48_RS13665 () | 2630878..2630973 | - | 96 | WP_000901365.1 | protein MgtS | - |
| C9E48_RS13670 () | 2631081..2632052 | - | 972 | WP_001310251.1 | transcriptional regulator FtrA | - |
| C9E48_RS13675 () | 2632147..2632542 | + | 396 | WP_001271101.1 | rhodanese | - |
| C9E48_RS13680 () | 2632583..2633770 | - | 1188 | WP_001054199.1 | efflux MFS transporter YdeE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|