MGE detailed information
MGE type: Prophage MGE length: 116925 bp
Accession: NZ_CP028656 Location: 2507153..2624077 Organism: Escherichia coli strain 121 Replicon: chromosome
Accession: NZ_CP028656 Location: 2507153..2624077 Organism: Escherichia coli strain 121 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E50_RS12800 () | 2503053..2504273 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| C9E50_RS12805 () | 2504398..2505093 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| C9E50_RS12810 () | 2505046..2506338 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| C9E50_RS12815 () | 2506496..2507110 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| C9E50_RS12820 () | 2507153..2508007 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| C9E50_RS12825 () | 2508009..2508626 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| C9E50_RS12830 () | 2508637..2511060 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E50_RS12835 () | 2511121..2513547 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E50_RS12840 () | 2513746..2514051 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| C9E50_RS12845 () | 2514159..2514869 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| C9E50_RS12850 () | 2514872..2515432 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C9E50_RS12855 () | 2515467..2515808 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| C9E50_RS12860 () | 2515943..2516269 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| C9E50_RS12870 () | 2517039..2517223 | - | 185 | Protein_2460 | DUF3596 domain-containing protein | - |
| C9E50_RS12875 () | 2517258..2517509 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| C9E50_RS12880 () | 2517582..2520053 | - | 2472 | WP_000048458.1 | exonuclease | - |
| C9E50_RS12885 () | 2520146..2520337 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C9E50_RS12890 () | 2520334..2520522 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C9E50_RS12900 () | 2521091..2521309 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| C9E50_RS12905 () | 2521381..2521680 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| C9E50_RS12910 () | 2522033..2522311 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E50_RS12915 () | 2522313..2522504 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C9E50_RS12920 () | 2522525..2522896 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| C9E50_RS12925 () | 2522994..2523296 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| C9E50_RS12930 () | 2523293..2523718 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C9E50_RS12935 () | 2523741..2524703 | + | 963 | WP_000095670.1 | helix-turn-helix domain-containing protein | - |
| C9E50_RS12940 () | 2524710..2525450 | + | 741 | WP_000788936.1 | ATP-binding protein | - |
| C9E50_RS12945 () | 2525476..2526245 | + | 770 | Protein_2474 | DUF1627 domain-containing protein | - |
| C9E50_RS12950 () | 2526261..2526656 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| C9E50_RS12955 () | 2526713..2527297 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| C9E50_RS12960 () | 2527413..2527517 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| C9E50_RS12965 () | 2527763..2527918 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| C9E50_RS12970 () | 2528086..2528364 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| C9E50_RS12975 () | 2528366..2529415 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| C9E50_RS12980 () | 2529428..2529787 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E50_RS12985 () | 2529784..2530473 | + | 690 | WP_001059381.1 | antiterminator | - |
| C9E50_RS13010 () | 2531110..2531538 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| C9E50_RS13015 () | 2531535..2531790 | + | 256 | Protein_2484 | DUF3927 family protein | - |
| C9E50_RS13020 () | 2532017..2533867 | + | 1851 | WP_024748470.1 | SASA family carbohydrate esterase | - |
| C9E50_RS13025 () | 2534307..2534522 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E50_RS13030 () | 2534527..2534871 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E50_RS13035 () | 2534922..2535455 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E50_RS13040 () | 2535724..2536293 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E50_RS13045 () | 2536293..2536439 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C9E50_RS13055 () | 2536667..2536852 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C9E50_RS13060 () | 2537277..2537504 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| C9E50_RS13065 () | 2537546..2537911 | + | 366 | WP_015994246.1 | HNH endonuclease | - |
| C9E50_RS13075 () | 2538201..2538764 | + | 564 | WP_001303051.1 | terminase small subunit | - |
| C9E50_RS13080 () | 2538761..2540422 | + | 1662 | WP_024748457.1 | terminase large subunit | - |
| C9E50_RS13085 () | 2540486..2542423 | + | 1938 | WP_000172999.1 | phage major capsid protein | - |
| C9E50_RS13090 () | 2542468..2542689 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| C9E50_RS13095 () | 2542635..2545136 | + | 2502 | WP_000267292.1 | phage portal protein | - |
| C9E50_RS13100 () | 2545216..2545542 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| C9E50_RS13105 () | 2545552..2545902 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| C9E50_RS13110 () | 2545899..2546345 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| C9E50_RS13115 () | 2546342..2546686 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C9E50_RS13120 () | 2546745..2547461 | + | 717 | WP_001275508.1 | tail protein | - |
| C9E50_RS13125 () | 2547467..2547841 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| C9E50_RS13130 () | 2547937..2548146 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C9E50_RS13135 () | 2548199..2551441 | + | 3243 | WP_064261924.1 | phage tail tape measure protein | - |
| C9E50_RS13140 () | 2551434..2551775 | + | 342 | WP_000807954.1 | phage tail protein | - |
| C9E50_RS13145 () | 2551775..2552473 | + | 699 | WP_001303038.1 | phage minor tail protein L | - |
| C9E50_RS13150 () | 2552484..2553227 | + | 744 | WP_046671488.1 | C40 family peptidase | - |
| C9E50_RS13155 () | 2553173..2553805 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| C9E50_RS13160 () | 2554148..2555323 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| C9E50_RS13165 () | 2555275..2557620 | + | 2346 | WP_129137390.1 | host specificity protein J | - |
| C9E50_RS13170 () | 2557688..2558287 | + | 600 | WP_001228304.1 | Outer membrane protein X | VF |
| C9E50_RS13175 () | 2558439..2559752 | + | 1314 | WP_024748516.1 | ISNCY family transposase KIS | Transposase |
| C9E50_RS13180 () | 2559754..2560023 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E50_RS13185 () | 2560136..2560710 | + | 575 | Protein_2516 | hypothetical protein | VF |
| C9E50_RS13190 () | 2561050..2562375 | - | 1326 | WP_001025672.1 | hypothetical protein | VF |
| C9E50_RS13200 () | 2563036..2563950 | - | 915 | Protein_2518 | Tyrosine recombinase XerD ; Integrase | Integrase |
| C9E50_RS13205 () | 2563964..2564074 | + | 111 | Protein_2519 | type III effector | - |
| C9E50_RS13210 () | 2564121..2564755 | - | 635 | Protein_2520 | IS256 family transposase ISEic2 | Transposase |
| C9E50_RS13215 () | 2565040..2566578 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| C9E50_RS13220 () | 2566628..2566975 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C9E50_RS13225 () | 2566972..2567352 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| C9E50_RS13230 () | 2567692..2567970 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| C9E50_RS13235 () | 2568398..2568544 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| C9E50_RS13240 () | 2568681..2569328 | - | 648 | WP_001303944.1 | hypothetical protein | VF |
| C9E50_RS13245 () | 2569512..2570102 | + | 591 | WP_001144877.1 | hypothetical protein | VF |
| C9E50_RS13250 () | 2570321..2571377 | - | 1057 | Protein_2528 | IS630 family transposase | - |
| C9E50_RS13255 () | 2571609..2572259 | + | 651 | WP_001345079.1 | hypothetical protein | VF |
| C9E50_RS13260 () | 2572418..2572653 | + | 236 | Protein_2530 | IS3 family transposase | - |
| C9E50_RS13270 () | 2573388..2573513 | + | 126 | Protein_2531 | outer membrane protein OmpW | - |
| C9E50_RS13275 () | 2573559..2574689 | - | 1131 | WP_001500821.1 | hypothetical protein ; Integrase | Integrase |
| C9E50_RS13280 () | 2574667..2574915 | - | 249 | WP_000113189.1 | excisionase | - |
| C9E50_RS13285 () | 2574980..2575747 | - | 768 | WP_194165168.1 | exonuclease | - |
| C9E50_RS13290 () | 2575785..2576998 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| C9E50_RS13295 () | 2577037..2578737 | - | 1701 | Protein_2536 | exonuclease | - |
| C9E50_RS13300 () | 2578830..2579018 | - | 189 | WP_000092782.1 | DUF1482 family protein | - |
| C9E50_RS13305 () | 2579015..2579203 | - | 189 | WP_000450222.1 | cell division inhibitor | - |
| C9E50_RS13315 () | 2579768..2579977 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| C9E50_RS13320 () | 2579978..2580616 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| C9E50_RS13325 () | 2580628..2580780 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| C9E50_RS13330 () | 2581073..2581411 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| C9E50_RS13335 () | 2581803..2582045 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| C9E50_RS13340 () | 2582029..2582454 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| C9E50_RS13345 () | 2582523..2583566 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| C9E50_RS13350 () | 2583559..2584020 | + | 462 | WP_000139447.1 | replication protein | - |
| C9E50_RS13355 () | 2584054..2584770 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| C9E50_RS13360 () | 2584803..2585084 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| C9E50_RS13365 () | 2585081..2585308 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| C9E50_RS13370 () | 2585301..2585612 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| C9E50_RS13375 () | 2585740..2585958 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C9E50_RS13380 () | 2585960..2586517 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| - () | 2586738..2586796 | - | 59 | - | - | Antitoxin Detail |
| C9E50_RS13385 () | 2586808..2586963 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C9E50_RS13390 () | 2587083..2587427 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C9E50_RS13395 () | 2587549..2587821 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| C9E50_RS13400 () | 2587823..2588872 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| C9E50_RS13405 () | 2588885..2589190 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E50_RS13410 () | 2589253..2589807 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| C9E50_RS13415 () | 2590032..2590229 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| C9E50_RS13420 () | 2590365..2591078 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| C9E50_RS13435 () | 2591529..2591960 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| C9E50_RS13440 () | 2591957..2592212 | + | 256 | Protein_2562 | DUF3927 family protein | - |
| C9E50_RS13445 () | 2592438..2594288 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| C9E50_RS13450 () | 2594728..2594943 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E50_RS13455 () | 2594948..2595292 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E50_RS13460 () | 2595343..2595876 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E50_RS13465 () | 2596147..2596716 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E50_RS13470 () | 2596716..2596862 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| C9E50_RS13475 () | 2597085..2597270 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C9E50_RS13480 () | 2597796..2598110 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| C9E50_RS13485 () | 2598192..2598416 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| C9E50_RS13495 () | 2598803..2599348 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| C9E50_RS13500 () | 2599323..2601248 | + | 1926 | WP_024748469.1 | phage terminase large subunit family protein | - |
| C9E50_RS13505 () | 2601245..2601451 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C9E50_RS13510 () | 2601448..2603049 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| C9E50_RS13515 () | 2603030..2604349 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| C9E50_RS13520 () | 2604359..2604691 | + | 333 | WP_001295978.1 | head decoration protein | - |
| C9E50_RS13525 () | 2604747..2605772 | + | 1026 | WP_024748468.1 | major capsid protein | - |
| C9E50_RS13530 () | 2605814..2606212 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| C9E50_RS13535 () | 2606224..2606577 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| C9E50_RS13540 () | 2606592..2607125 | + | 534 | WP_000975020.1 | phage tail protein | - |
| C9E50_RS13545 () | 2607122..2607517 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| C9E50_RS13550 () | 2607525..2608277 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| C9E50_RS13555 () | 2608291..2608713 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| C9E50_RS13560 () | 2608740..2609153 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C9E50_RS13565 () | 2609134..2611746 | + | 2613 | WP_000081804.1 | phage tail tape measure protein | - |
| C9E50_RS13570 () | 2611743..2612072 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C9E50_RS13575 () | 2612072..2612770 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| C9E50_RS13580 () | 2612781..2613524 | + | 744 | WP_000194801.1 | C40 family peptidase | - |
| C9E50_RS13585 () | 2613470..2614102 | + | 633 | WP_129137391.1 | tail assembly protein | - |
| C9E50_RS13590 () | 2614349..2617828 | + | 3480 | WP_000514788.1 | host specificity protein J | - |
| C9E50_RS13595 () | 2617896..2618495 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| C9E50_RS13600 () | 2618560..2619873 | + | 1314 | WP_137049508.1 | ISNCY family transposase KIS | Transposase |
| C9E50_RS13605 () | 2619875..2620144 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E50_RS13610 () | 2620258..2620833 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| C9E50_RS13615 () | 2620906..2621535 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| C9E50_RS13620 () | 2621617..2622258 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| C9E50_RS13630 () | 2622420..2622662 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E50_RS13635 () | 2622794..2624077 | + | 1284 | Protein_2599 | MHS family MFS transporter YdfJ | - |
| C9E50_RS13640 () | 2624166..2625626 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| C9E50_RS13645 () | 2625662..2625865 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C9E50_RS13650 () | 2626042..2626728 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C9E50_RS13655 () | 2626817..2627563 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|