MGE detailed information
MGE type: Genomic_island MGE length: 21240 bp
Accession: NZ_CP028609 Location: 4740901..4762140 Organism: Escherichia coli strain 142 Replicon: chromosome
Accession: NZ_CP028609 Location: 4740901..4762140 Organism: Escherichia coli strain 142 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E66_RS24445 () | 4736627..4737169 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| C9E66_RS24450 () | 4737462..4739612 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| C9E66_RS24455 () | 4739662..4739865 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| C9E66_RS24460 () | 4739876..4740832 | + | 957 | WP_001297640.1 | GTPase | - |
| C9E66_RS24465 () | 4740901..4742259 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| C9E66_RS24470 () | 4742268..4742552 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| C9E66_RS24475 () | 4742830..4745262 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| C9E66_RS24480 () | 4745329..4746798 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| C9E66_RS24485 () | 4746798..4748552 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4748702..4748778 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4748702..4748778 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4748702..4748778 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4748702..4748778 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4748702..4748778 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4748702..4748778 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4748702..4748778 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4748702..4748778 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| C9E66_RS24490 () | 4748773..4749114 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| C9E66_RS24495 () | 4749161..4750324 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| C9E66_RS24500 () | 4750372..4751253 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| C9E66_RS24505 () | 4751350..4751514 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| C9E66_RS24510 () | 4751691..4753103 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| C9E66_RS29445 () | 4753346..4753546 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| C9E66_RS24515 () | 4753551..4754303 | - | 753 | Protein_4669 | Recombination-promoting nuclease RpnD | VF |
| C9E66_RS24520 () | 4754770..4756002 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| C9E66_RS24525 () | 4756043..4757314 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| C9E66_RS24530 () | 4757430..4758581 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| C9E66_RS24535 () | 4758591..4759358 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| C9E66_RS24540 () | 4759355..4759621 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| C9E66_RS24545 () | 4759933..4762140 | + | 2208 | WP_000535072.1 | hypothetical protein | VF |
| C9E66_RS24555 () | 4762406..4763248 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| C9E66_RS24560 () | 4763316..4764494 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |