MGE detailed information
MGE type: Prophage MGE length: 53628 bp
Accession: NZ_CP028609 Location: 2466465..2520092 Organism: Escherichia coli strain 142 Replicon: chromosome
Accession: NZ_CP028609 Location: 2466465..2520092 Organism: Escherichia coli strain 142 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E66_RS12460 () | 2463143..2463448 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| C9E66_RS12465 () | 2463556..2464266 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| C9E66_RS12470 () | 2464269..2464829 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C9E66_RS12475 () | 2464864..2465205 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| C9E66_RS12480 () | 2465340..2465666 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| C9E66_RS12490 () | 2465938..2466620 | - | 683 | Protein_2395 | DUF3596 domain-containing protein | - |
| C9E66_RS12495 () | 2466655..2466906 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| C9E66_RS12500 () | 2466979..2469450 | - | 2472 | WP_000048458.1 | exonuclease | - |
| C9E66_RS12505 () | 2469543..2469734 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C9E66_RS12510 () | 2469731..2469919 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C9E66_RS12520 () | 2470488..2470706 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| C9E66_RS12525 () | 2470778..2471077 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| C9E66_RS12530 () | 2471430..2471708 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E66_RS12535 () | 2471710..2471901 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C9E66_RS12540 () | 2471922..2472293 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| C9E66_RS12545 () | 2472391..2472693 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| C9E66_RS12550 () | 2472690..2473115 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C9E66_RS12555 () | 2473138..2474100 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| C9E66_RS12560 () | 2474107..2474847 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| C9E66_RS12565 () | 2474873..2475642 | + | 770 | Protein_2409 | DUF1627 domain-containing protein | - |
| C9E66_RS12570 () | 2475658..2476053 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| C9E66_RS12575 () | 2476110..2476694 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| C9E66_RS12580 () | 2476810..2476914 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| C9E66_RS12585 () | 2477160..2477315 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| C9E66_RS12590 () | 2477483..2477761 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| C9E66_RS12595 () | 2477763..2478812 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| C9E66_RS12600 () | 2478825..2479184 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E66_RS12605 () | 2479181..2479870 | + | 690 | WP_001059381.1 | antiterminator | - |
| C9E66_RS12630 () | 2480509..2480937 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| C9E66_RS12635 () | 2480934..2481189 | + | 256 | Protein_2419 | DUF3927 family protein | - |
| C9E66_RS12640 () | 2481416..2483266 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| C9E66_RS12645 () | 2483706..2483921 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E66_RS12650 () | 2483926..2484270 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E66_RS12655 () | 2484321..2484854 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E66_RS12660 () | 2485125..2485694 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E66_RS12665 () | 2485694..2485840 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C9E66_RS12675 () | 2486068..2486253 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C9E66_RS12680 () | 2486678..2486905 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| C9E66_RS12685 () | 2486947..2487312 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| C9E66_RS12695 () | 2487602..2488165 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| C9E66_RS12700 () | 2488162..2489823 | + | 1662 | WP_001301491.1 | terminase large subunit | - |
| C9E66_RS12705 () | 2489887..2491824 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| C9E66_RS12710 () | 2491869..2492090 | + | 222 | WP_001063094.1 | hypothetical protein | - |
| C9E66_RS12715 () | 2492036..2494615 | + | 2580 | WP_001304108.1 | phage portal protein | - |
| C9E66_RS12720 () | 2494618..2494944 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| C9E66_RS12725 () | 2494954..2495304 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| C9E66_RS12730 () | 2495301..2495747 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| C9E66_RS12735 () | 2495744..2496088 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C9E66_RS12740 () | 2496154..2496870 | + | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| C9E66_RS12745 () | 2496885..2497259 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| C9E66_RS12750 () | 2497355..2497564 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| C9E66_RS12755 () | 2497612..2500854 | + | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| C9E66_RS12760 () | 2500847..2501188 | + | 342 | WP_000807954.1 | phage tail protein | - |
| C9E66_RS12765 () | 2501188..2501886 | + | 699 | WP_001179481.1 | phage minor tail protein L | - |
| C9E66_RS12770 () | 2501897..2502640 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| C9E66_RS12775 () | 2502586..2503218 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| C9E66_RS12780 () | 2503560..2504764 | + | 1205 | Protein_2446 | phage tail protein | - |
| C9E66_RS29575 () | 2504855..2506351 | + | 1497 | Protein_2447 | DUF1983 domain-containing protein | - |
| C9E66_RS29580 () | 2506379..2507034 | + | 656 | Protein_2448 | DUF3672 domain-containing protein | - |
| C9E66_RS12790 () | 2507102..2507701 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| C9E66_RS12795 () | 2507766..2508989 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C9E66_RS12800 () | 2508991..2509260 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E66_RS12805 () | 2509374..2509949 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| C9E66_RS12810 () | 2510022..2510651 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| C9E66_RS12815 () | 2510733..2511374 | + | 642 | WP_001143808.1 | hypothetical protein | VF |
| C9E66_RS12825 () | 2511536..2511778 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E66_RS12830 () | 2511910..2513193 | + | 1284 | Protein_2456 | MHS family MFS transporter YdfJ | - |
| C9E66_RS12835 () | 2513282..2514742 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| C9E66_RS12840 () | 2514778..2514981 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C9E66_RS12845 () | 2515158..2515844 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C9E66_RS12850 () | 2515933..2516679 | - | 747 | WP_000636568.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| C9E66_RS12855 () | 2516816..2518861 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| C9E66_RS12860 () | 2518906..2519424 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| C9E66_RS12865 () | 2519700..2520092 | + | 393 | WP_000671724.1 | YdeI family stress tolerance OB fold protein | - |
| C9E66_RS12870 () | 2520347..2521237 | + | 891 | WP_000592852.1 | diguanylate cyclase DgcZ | - |
| C9E66_RS29585 () | 2521352..2521456 | - | 105 | WP_211180496.1 | protein MgtT | - |
| C9E66_RS12875 () | 2521456..2521551 | - | 96 | WP_000901365.1 | protein MgtS | - |
| C9E66_RS12880 () | 2521659..2522630 | - | 972 | WP_001310251.1 | transcriptional regulator FtrA | - |
| C9E66_RS12885 () | 2522725..2523120 | + | 396 | WP_001271101.1 | rhodanese | - |
| C9E66_RS12890 () | 2523161..2524348 | - | 1188 | WP_001054199.1 | efflux MFS transporter YdeE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | Prophage | TA20321 | NC_002655 | 2282958..2329636 | 0.009 |