MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92745 bp
Accession: NZ_CP028608 Location: 1..92745 Organism: Escherichia coli strain 143 Replicon: plasmid pTA143
Accession: NZ_CP028608 Location: 1..92745 Organism: Escherichia coli strain 143 Replicon: plasmid pTA143
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E67_RS28740 () | 1..978 | + | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| C9E67_RS28745 () | 1263..2003 | - | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| C9E67_RS28750 () | 2124..2354 | - | 231 | WP_010891288.1 | hypothetical protein | - |
| C9E67_RS29510 () | 2485..2977 | - | 493 | Protein_3 | hypothetical protein | VF |
| C9E67_RS28770 () | 3098..4537 | - | 1440 | WP_001213545.1 | hypothetical protein | VF |
| C9E67_RS28775 () | 4541..6661 | - | 2121 | WP_000987091.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| C9E67_RS28780 () | 6711..9707 | - | 2997 | WP_000217739.1 | hypothetical protein | VF |
| C9E67_RS28785 () | 9709..10224 | - | 516 | WP_000839950.1 | hypothetical protein | VF |
| C9E67_RS28795 () | 10765..11936 | - | 1172 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| C9E67_RS28800 () | 12115..12516 | - | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| C9E67_RS28805 () | 12608..13441 | - | 834 | WP_000096786.1 | hypothetical protein | VF |
| C9E67_RS28810 () | 13499..14011 | - | 513 | WP_001004187.1 | hypothetical protein | VF |
| C9E67_RS28815 () | 13998..15170 | - | 1173 | WP_071525076.1 | hypothetical protein | VF |
| C9E67_RS28820 () | 15209..16186 | - | 978 | WP_000776550.1 | hypothetical protein | VF |
| C9E67_RS28825 () | 16183..16782 | - | 600 | WP_000082782.1 | hypothetical protein | VF |
| C9E67_RS28830 () | 16779..17126 | - | 348 | WP_000173396.1 | hypothetical protein | VF |
| C9E67_RS28835 () | 17141..17695 | - | 555 | WP_000082929.1 | hypothetical protein | VF |
| C9E67_RS28840 () | 17692..18126 | - | 435 | WP_001231211.1 | hypothetical protein | VF |
| C9E67_RS28845 () | 18157..19380 | - | 1224 | WP_001173152.1 | hypothetical protein | VF |
| C9E67_RS28850 () | 19382..20887 | - | 1506 | WP_000092338.1 | hypothetical protein | VF |
| C9E67_RS28855 () | 20887..22854 | - | 1968 | WP_001302177.1 | hypothetical protein | VF |
| C9E67_RS28860 () | 22855..23730 | - | 876 | WP_001302175.1 | hypothetical protein | VF |
| C9E67_RS28865 () | 23817..26513 | - | 2697 | WP_001358886.1 | hypothetical protein | VF |
| C9E67_RS28875 () | 26966..27052 | + | 87 | Protein_23 | IS3 family transposase ISEhe3 | Transposase |
| C9E67_RS28880 () | 27156..27344 | - | 189 | Protein_24 | hypothetical protein | - |
| C9E67_RS28885 () | 27397..28395 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C9E67_RS28890 () | 28469..30190 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C9E67_RS28895 () | 30280..31386 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C9E67_RS28900 () | 31386..32207 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C9E67_RS28910 () | 33649..34130 | + | 482 | Protein_29 | IS1 family transposase IS1N | Transposase |
| C9E67_RS28915 () | 34386..38288 | - | 3903 | WP_001034100.1 | hypothetical protein | VF |
| C9E67_RS28925 () | 38469..39457 | - | 989 | Protein_31 | IS3 family transposase IS629 | Transposase |
| C9E67_RS28930 () | 39514..39903 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C9E67_RS28935 () | 39947..42157 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| C9E67_RS28940 () | 42334..42519 | + | 186 | WP_001302179.1 | hypothetical protein | - |
| C9E67_RS28945 () | 42519..42935 | + | 417 | Protein_35 | IS91 family transposase | - |
| C9E67_RS28950 () | 42935..43501 | + | 567 | Protein_36 | IS3 family transposase ISSd1 | Transposase |
| C9E67_RS28955 () | 43545..43760 | + | 216 | Protein_37 | transposase | - |
| C9E67_RS28960 () | 43860..44066 | - | 207 | WP_001105064.1 | hypothetical protein | - |
| C9E67_RS28965 () | 44161..44436 | - | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E67_RS28970 () | 44436..44720 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C9E67_RS28985 () | 45632..46489 | - | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| C9E67_RS28990 () | 46482..46556 | - | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| C9E67_RS29000 () | 46792..47046 | - | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| C9E67_RS29005 () | 47286..47624 | - | 339 | WP_000766796.1 | hypothetical protein | - |
| C9E67_RS29010 () | 47662..47871 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| C9E67_RS29015 () | 47917..48378 | - | 462 | WP_001233853.1 | thermonuclease family protein | - |
| C9E67_RS29020 () | 48623..48835 | - | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| C9E67_RS29025 () | 48968..49528 | - | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| C9E67_RS29030 () | 49631..50491 | - | 861 | WP_000704522.1 | hypothetical protein | VF |
| C9E67_RS29035 () | 50550..51296 | - | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| C9E67_RS29040 () | 51316..52704 | - | 1389 | Protein_51 | hypothetical protein | Relaxase |
| C9E67_RS29045 () | 52761..53012 | + | 252 | Protein_52 | IS3 family transposase IS1203 | Transposase |
| C9E67_RS29050 () | 53019..53189 | + | 171 | Protein_53 | IS3 family transposase IS1203 | Transposase |
| C9E67_RS29055 () | 53257..53481 | - | 225 | Protein_54 | IS3 family transposase IS3H | Transposase |
| C9E67_RS29060 () | 53555..63064 | - | 9510 | WP_000581721.1 | Toxin B | VF |
| C9E67_RS29065 () | 63171..63323 | - | 153 | Protein_56 | IS1 family transposase | - |
| C9E67_RS29070 () | 63320..63440 | - | 121 | Protein_57 | IS21 family transposase ISEc62 | Transposase |
| C9E67_RS29075 () | 63480..63743 | - | 264 | Protein_58 | IS21 family transposase ISEc62 | Transposase |
| C9E67_RS29080 () | 63837..64186 | + | 350 | Protein_59 | IS3 family transposase IS3H | Transposase |
| C9E67_RS29090 () | 64858..65289 | - | 432 | WP_001453090.1 | hypothetical protein | - |
| C9E67_RS29095 () | 65357..67378 | - | 2022 | Protein_61 | hypothetical protein | Relaxase |
| C9E67_RS29100 () | 67512..67670 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 67735..67933 | - | 199 | NuclAT_0 | - | - |
| - () | 67735..67933 | - | 199 | NuclAT_0 | - | - |
| - () | 67735..67933 | - | 199 | NuclAT_0 | - | - |
| - () | 67735..67933 | - | 199 | NuclAT_0 | - | - |
| C9E67_RS29105 () | 67902..68663 | - | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| C9E67_RS29110 () | 68660..69094 | - | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| C9E67_RS29115 () | 69149..71107 | - | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| C9E67_RS29120 () | 71173..71406 | - | 234 | WP_000005995.1 | DUF905 family protein | - |
| C9E67_RS29125 () | 71463..71915 | - | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| C9E67_RS29130 () | 71941..72147 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| C9E67_RS29135 () | 72217..72690 | + | 474 | WP_032338770.1 | hypothetical protein | - |
| C9E67_RS29140 () | 72776..73339 | - | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| C9E67_RS29145 () | 73386..74747 | - | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| C9E67_RS29150 () | 74799..75029 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| C9E67_RS29515 () | 75546..76055 | + | 510 | WP_032245379.1 | hypothetical protein | - |
| C9E67_RS29165 () | 76025..76216 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| C9E67_RS29170 () | 76213..76635 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| C9E67_RS29175 () | 76682..76984 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| C9E67_RS29520 () | 77525..78301 | - | 777 | WP_001005037.1 | hypothetical protein | - |
| C9E67_RS29190 () | 78347..78901 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| C9E67_RS29195 () | 78795..79016 | - | 222 | WP_001104869.1 | hypothetical protein | - |
| C9E67_RS29200 () | 79017..79700 | - | 684 | WP_000085945.1 | DNA methylase | - |
| C9E67_RS29210 () | 79777..80082 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| C9E67_RS29215 () | 80086..80988 | - | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| C9E67_RS29220 () | 81065..82789 | - | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| C9E67_RS29245 () | 84089..85060 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C9E67_RS29250 () | 85060..86226 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| C9E67_RS29255 () | 86814..87152 | - | 339 | WP_071525396.1 | RepB family plasmid replication initiator protein | - |
| C9E67_RS29260 () | 87114..88327 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| C9E67_RS29270 () | 89050..89856 | - | 807 | WP_000016989.1 | site-specific integrase | - |
| C9E67_RS29275 () | 89857..90162 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | - |
| C9E67_RS29280 () | 90164..90382 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| C9E67_RS29285 () | 90841..91524 | + | 684 | WP_010891291.1 | DNA-binding protein | - |
| C9E67_RS29290 () | 91521..92141 | + | 621 | WP_001248529.1 | hypothetical protein | - |
| C9E67_RS29295 () | 92138..92338 | + | 201 | WP_000708307.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|