MGE detailed information
MGE type: Genomic_island MGE length: 10758 bp
Accession: NZ_CP028589 Location: 3928320..3939077 Organism: Escherichia coli strain WCHEC4533 Replicon: chromosome
Accession: NZ_CP028589 Location: 3928320..3939077 Organism: Escherichia coli strain WCHEC4533 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBR03_RS21155 () | 3923666..3924448 | - | 783 | WP_001521911.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| DBR03_RS21160 () | 3924764..3927973 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| DBR03_RS21165 () | 3928134..3928274 | + | 141 | WP_001308408.1 | ash family protein | - |
| DBR03_RS21170 () | 3928320..3928790 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| DBR03_RS21175 () | 3928787..3928889 | + | 103 | Protein_3711 | helix-turn-helix domain-containing protein | - |
| DBR03_RS21180 () | 3928981..3929139 | + | 159 | Protein_3712 | integrase | - |
| DBR03_RS21190 () | 3929344..3930597 | - | 1254 | WP_001521908.1 | glutamate-5-semialdehyde dehydrogenase | - |
| DBR03_RS21195 () | 3930609..3931712 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| DBR03_RS21200 () | 3932000..3933055 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| DBR03_RS21205 () | 3933094..3933495 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| DBR03_RS21210 () | 3933553..3934797 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3934213..3934293 | - | 81 | NuclAT_10 | - | - |
| - () | 3934213..3934293 | - | 81 | NuclAT_10 | - | - |
| - () | 3934213..3934293 | - | 81 | NuclAT_10 | - | - |
| - () | 3934213..3934293 | - | 81 | NuclAT_10 | - | - |
| DBR03_RS21215 () | 3934889..3935347 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| DBR03_RS21220 () | 3935608..3937065 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| DBR03_RS27090 () | 3937122..3937262 | - | 141 | WP_166739706.1 | peptide chain release factor | - |
| DBR03_RS21230 () | 3937470..3937676 | - | 207 | Protein_3721 | RtcB family protein | - |
| DBR03_RS21235 () | 3937921..3938373 | - | 453 | WP_023144376.1 | GNAT family N-acetyltransferase | - |
| DBR03_RS21240 () | 3938383..3938781 | - | 399 | WP_001521903.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| DBR03_RS21245 () | 3938784..3939077 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| DBR03_RS21250 () | 3939129..3940184 | - | 1056 | WP_001226177.1 | DNA polymerase IV | - |
| DBR03_RS21255 () | 3940255..3941040 | - | 786 | WP_000207556.1 | putative lateral flagellar export/assembly protein LafU | - |
| DBR03_RS21260 () | 3940985..3942724 | + | 1740 | WP_021523009.1 | flagellar biosynthesis protein FlhA | - |
| DBR03_RS21265 () | 3942803..3943156 | + | 354 | WP_024166466.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| DBR03_RS21270 () | 3943213..3943962 | - | 750 | WP_016233951.1 | C40 family peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|