MGE detailed information
MGE type: Conjugative plasmid MGE length: 117244 bp
Accession: NZ_CP028553 Location: 1..117244 Organism: Klebsiella variicola strain WCHKP19 Replicon: plasmid pCTXM15_020019
Accession: NZ_CP028553 Location: 1..117244 Organism: Klebsiella variicola strain WCHKP19 Replicon: plasmid pCTXM15_020019
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAY66_RS02505 () | 19..894 | + | 876 | WP_004098982.1 | RepB family plasmid replication initiator protein | - |
| CAY66_RS02510 () | 1567..2193 | + | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| CAY66_RS02515 () | 2313..2492 | + | 180 | WP_006788217.1 | hypothetical protein | - |
| CAY66_RS02520 () | 2956..3750 | - | 795 | WP_004197635.1 | site-specific integrase | - |
| CAY66_RS02525 () | 3948..4964 | - | 1017 | WP_017899884.1 | hypothetical protein | - |
| CAY66_RS02530 () | 4975..5289 | - | 315 | WP_053389906.1 | hypothetical protein | - |
| CAY66_RS02535 () | 5316..5711 | - | 396 | WP_017899885.1 | hypothetical protein | - |
| CAY66_RS02540 () | 5880..6185 | - | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CAY66_RS02545 () | 6187..6405 | - | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CAY66_RS02565 () | 7223..7513 | - | 291 | WP_013023783.1 | hypothetical protein | - |
| CAY66_RS02570 () | 7510..8637 | - | 1128 | WP_013023782.1 | DUF4238 domain-containing protein | - |
| CAY66_RS02575 () | 8671..10263 | - | 1593 | WP_015344964.1 | hypothetical protein | - |
| CAY66_RS02580 () | 10470..11249 | - | 780 | WP_013023780.1 | hypothetical protein | - |
| CAY66_RS02585 () | 11262..11762 | - | 501 | WP_013023779.1 | hypothetical protein | - |
| CAY66_RS02590 () | 12037..12300 | + | 264 | WP_013023778.1 | hypothetical protein | - |
| CAY66_RS02595 () | 12297..12863 | + | 567 | WP_013023777.1 | hypothetical protein | - |
| CAY66_RS02600 () | 12894..13388 | + | 495 | WP_013023776.1 | hypothetical protein | - |
| CAY66_RS02605 () | 13432..13800 | + | 369 | WP_048337418.1 | hypothetical protein | - |
| CAY66_RS02610 () | 13834..14037 | + | 204 | WP_004098931.1 | hemolysin expression modulator Hha | - |
| CAY66_RS02615 () | 14086..14343 | + | 258 | WP_017899889.1 | hypothetical protein | - |
| CAY66_RS02620 () | 14419..14673 | + | 255 | WP_009653916.1 | hypothetical protein | - |
| CAY66_RS02625 () | 14809..15585 | - | 777 | WP_013609504.1 | DUF2971 domain-containing protein | - |
| CAY66_RS02630 () | 15826..16149 | - | 324 | WP_017899891.1 | hypothetical protein | - |
| CAY66_RS02635 () | 16328..16597 | - | 270 | Protein_23 | SOS response-associated peptidase family protein | - |
| CAY66_RS02645 () | 16733..16900 | + | 168 | Protein_24 | IS5/IS1182 family transposase | - |
| CAY66_RS02650 () | 16956..17105 | + | 150 | Protein_25 | IS110 family transposase | - |
| CAY66_RS02655 () | 17388..18569 | + | 1182 | WP_013023770.1 | DUF4268 domain-containing protein | - |
| CAY66_RS02670 () | 19761..20618 | - | 858 | WP_013023768.1 | incFII family plasmid replication initiator RepA | - |
| CAY66_RS02675 () | 20611..20688 | - | 78 | WP_004171457.1 | RepA leader peptide Tap | - |
| CAY66_RS02680 () | 20920..21189 | - | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| CAY66_RS02685 () | 21307..21786 | - | 480 | WP_014343478.1 | Phospholipase D | VF |
| CAY66_RS02690 () | 21990..23567 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| CAY66_RS02695 () | 23891..24595 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CAY66_RS02705 () | 24717..25622 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| CAY66_RS02710 () | 25619..26857 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| CAY66_RS02715 () | 26857..27441 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| CAY66_RS02730 () | 27934..28698 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| CAY66_RS31030 () | 28816..28884 | - | 69 | Protein_37 | EAL domain-containing protein | - |
| CAY66_RS02740 () | 29205..29705 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| CAY66_RS02750 () | 29833..30672 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| CAY66_RS02755 () | 30666..31013 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| CAY66_RS02760 () | 31130..31975 | - | 846 | WP_001749984.1 | Streptomycin 3''-adenylyltransferase | ARG |
| CAY66_RS02765 () | 32156..32629 | - | 474 | WP_001749985.1 | Dihydrofolate reductase type 1 | ARG |
| CAY66_RS02770 () | 32762..33214 | - | 453 | WP_001749986.1 | hypothetical protein | ARG |
| CAY66_RS02775 () | 33311..33865 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| CAY66_RS02780 () | 34157..35170 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| CAY66_RS02790 () | 35641..36345 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CAY66_RS02795 () | 36407..37363 | - | 957 | Protein_47 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CAY66_RS02800 () | 37527..38084 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CAY66_RS02805 () | 38267..39127 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| CAY66_RS02810 () | 39386..39862 | + | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| CAY66_RS02815 () | 39909..40784 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| CAY66_RS02820 () | 41119..41313 | - | 195 | Protein_52 | transposase | - |
| CAY66_RS02825 () | 41370..42067 | + | 698 | Protein_53 | IS1 family transposase IS1G | Transposase |
| CAY66_RS02830 () | 42084..42356 | - | 273 | Protein_54 | IS1380 family transposase ISEcp1 | Transposase |
| CAY66_RS02835 () | 42595..43337 | + | 743 | Protein_55 | ISKra4 family transposase ISKpn19 | Transposase |
| CAY66_RS02840 () | 43370..43798 | + | 429 | Protein_56 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| CAY66_RS02845 () | 44117..44773 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| CAY66_RS02850 () | 45055..46446 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| CAY66_RS02855 () | 46483..47055 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| CAY66_RS02860 () | 47192..47782 | - | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| CAY66_RS02865 () | 47833..48408 | + | 576 | WP_077256884.1 | DUF4113 domain-containing protein | - |
| CAY66_RS02870 () | 48555..48836 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| CAY66_RS02875 () | 48817..49146 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CAY66_RS02880 () | 49382..49639 | + | 258 | WP_048337415.1 | hypothetical protein | - |
| CAY66_RS02885 () | 49673..50377 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CAY66_RS02890 () | 50565..50873 | - | 309 | WP_004152383.1 | hypothetical protein | - |
| CAY66_RS02895 () | 50870..51520 | - | 651 | WP_014343480.1 | DUF2726 domain-containing protein | - |
| CAY66_RS02900 () | 51576..52220 | - | 645 | WP_014343481.1 | hypothetical protein | - |
| CAY66_RS02905 () | 52270..52872 | - | 603 | WP_187358056.1 | hypothetical protein | - |
| CAY66_RS02910 () | 53033..53626 | - | 594 | WP_013609537.1 | fertility inhibition protein FinO | - |
| CAY66_RS02915 () | 53698..54423 | - | 726 | WP_013023834.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| CAY66_RS02920 () | 54504..59765 | - | 5262 | WP_047665818.1 | Multifunctional conjugation protein TraI | Relaxase |
| CAY66_RS02925 () | 59765..62077 | - | 2313 | Protein_73 | type IV conjugative transfer system coupling protein TraD | - |
| CAY66_RS31035 () | 62204..62893 | - | 690 | WP_013023831.1 | hypothetical protein | - |
| CAY66_RS02935 () | 63086..63817 | - | 732 | WP_013023830.1 | complement resistance protein TraT | - |
| CAY66_RS02940 () | 64003..64536 | - | 534 | WP_014343486.1 | conjugal transfer protein TraS | - |
| CAY66_RS02945 () | 64539..67388 | - | 2850 | WP_013609534.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CAY66_RS02950 () | 67388..68767 | - | 1380 | WP_014343487.1 | conjugal transfer protein TraH | - |
| CAY66_RS02955 () | 68745..69188 | - | 444 | WP_013023828.1 | F-type conjugal transfer protein TrbF | - |
| CAY66_RS02960 () | 69234..69791 | - | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CAY66_RS02965 () | 69763..70002 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CAY66_RS02970 () | 70013..70765 | - | 753 | WP_048337413.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CAY66_RS02975 () | 70786..71112 | - | 327 | WP_004152676.1 | hypothetical protein | - |
| CAY66_RS02980 () | 71125..71373 | - | 249 | WP_004152675.1 | hypothetical protein | - |
| CAY66_RS02985 () | 71351..71605 | - | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| CAY66_RS02990 () | 71637..73592 | - | 1956 | WP_013023827.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CAY66_RS02995 () | 73651..74289 | - | 639 | WP_011977786.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CAY66_RS03000 () | 74302..75291 | - | 990 | WP_009309872.1 | conjugal transfer pilus assembly protein TraU | - |
| CAY66_RS03005 () | 75288..75677 | - | 390 | WP_004194992.1 | hypothetical protein | - |
| CAY66_RS03010 () | 75719..76345 | - | 627 | WP_009309871.1 | type-F conjugative transfer system protein TraW | - |
| CAY66_RS03015 () | 76345..76734 | - | 390 | WP_004197815.1 | type-F conjugative transfer system protein TrbI | - |
| CAY66_RS03020 () | 76734..79373 | - | 2640 | WP_013023824.1 | type IV secretion system protein TraC | - |
| CAY66_RS03025 () | 79445..79843 | - | 399 | WP_013609531.1 | hypothetical protein | - |
| CAY66_RS03035 () | 80219..80623 | - | 405 | WP_004197817.1 | hypothetical protein | - |
| CAY66_RS03040 () | 80690..81001 | - | 312 | WP_015344986.1 | hypothetical protein | - |
| CAY66_RS03045 () | 81002..81220 | - | 219 | WP_015344987.1 | hypothetical protein | - |
| CAY66_RS03050 () | 81326..81736 | - | 411 | WP_009309869.1 | hypothetical protein | - |
| CAY66_RS03055 () | 81868..82452 | - | 585 | WP_013023822.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CAY66_RS03060 () | 82566..83990 | - | 1425 | WP_004194260.1 | conjugal transfer protein TraB | - |
| CAY66_RS03065 () | 83990..84730 | - | 741 | WP_013023821.1 | type-F conjugative transfer system secretin TraK | - |
| CAY66_RS03070 () | 84717..85283 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| CAY66_RS03075 () | 85303..85608 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| CAY66_RS03080 () | 85622..85990 | - | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| CAY66_RS03085 () | 86059..86259 | - | 201 | WP_004194116.1 | TraY domain-containing protein | - |
| CAY66_RS03090 () | 86345..87046 | - | 702 | WP_004194113.1 | hypothetical protein | - |
| CAY66_RS03095 () | 87276..87668 | - | 393 | WP_004194114.1 | relaxosome protein TraM | - |
| CAY66_RS03100 () | 88100..88585 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
| CAY66_RS03105 () | 88618..88947 | - | 330 | WP_011977736.1 | hypothetical protein | - |
| CAY66_RS03110 () | 88980..89801 | - | 822 | WP_004152492.1 | DUF945 domain-containing protein | - |
| CAY66_RS03120 () | 90609..91817 | + | 1209 | WP_015344990.1 | IS256 family transposase ISEic2 | Transposase |
| CAY66_RS03125 () | 91953..92366 | - | 414 | WP_013023817.1 | helix-turn-helix domain-containing protein | - |
| CAY66_RS03130 () | 92367..92645 | - | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| CAY66_RS03135 () | 92635..92955 | - | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CAY66_RS03140 () | 93036..93260 | - | 225 | WP_004152719.1 | hypothetical protein | - |
| CAY66_RS03145 () | 93271..93483 | - | 213 | WP_013023815.1 | hypothetical protein | - |
| CAY66_RS03150 () | 93544..93900 | - | 357 | WP_013023814.1 | hypothetical protein | - |
| CAY66_RS03160 () | 94742..95059 | - | 318 | WP_013023810.1 | hypothetical protein | - |
| CAY66_RS03165 () | 95074..95424 | - | 351 | WP_013023809.1 | hypothetical protein | - |
| CAY66_RS03170 () | 95421..95693 | - | 273 | WP_014343506.1 | hypothetical protein | - |
| CAY66_RS03180 () | 96386..96544 | - | 159 | WP_014343509.1 | type I toxin-antitoxin system Hok family toxin | - |
| CAY66_RS03190 () | 96772..97146 | - | 375 | WP_047665807.1 | hypothetical protein | - |
| CAY66_RS03195 () | 97202..97528 | - | 327 | WP_013023807.1 | hypothetical protein | - |
| CAY66_RS03200 () | 97525..98253 | - | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| CAY66_RS03205 () | 98250..98681 | - | 432 | WP_013023806.1 | conjugation system SOS inhibitor PsiB | - |
| CAY66_RS03210 () | 98726..100783 | - | 2058 | WP_013023805.1 | ParB/RepB/Spo0J family partition protein | - |
| CAY66_RS03215 () | 100853..101101 | - | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| CAY66_RS03220 () | 101150..101692 | - | 543 | WP_015344994.1 | single-stranded DNA-binding protein | - |
| CAY66_RS03235 () | 102522..103085 | - | 564 | WP_004152756.1 | methyltransferase | - |
| CAY66_RS03240 () | 103133..104488 | - | 1356 | WP_015344996.1 | DUF3560 domain-containing protein | - |
| CAY66_RS03245 () | 104540..104770 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| CAY66_RS03250 () | 104862..105089 | - | 228 | WP_001568050.1 | hypothetical protein | - |
| CAY66_RS03265 () | 105769..106089 | - | 321 | WP_001568049.1 | hypothetical protein | - |
| CAY66_RS03270 () | 106124..106378 | - | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| CAY66_RS03275 () | 106566..106757 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| CAY66_RS03280 () | 106800..107306 | - | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| CAY66_RS03285 () | 107349..107777 | - | 429 | WP_004152356.1 | antirestriction protein | - |
| CAY66_RS03290 () | 108458..109225 | - | 768 | WP_013214013.1 | hypothetical protein | - |
| CAY66_RS03295 () | 109279..109698 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| CAY66_RS03300 () | 109708..109929 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| CAY66_RS03305 () | 109929..110630 | - | 702 | WP_001568041.1 | DNA methylase | - |
| CAY66_RS03310 () | 111067..111297 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| CAY66_RS03315 () | 111361..112032 | - | 672 | WP_015345000.1 | plasmid partitioning/stability family protein | - |
| CAY66_RS03320 () | 112035..113006 | - | 972 | WP_001568038.1 | hypothetical protein | - |
| CAY66_RS03325 () | 113255..114742 | - | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| CAY66_RS03335 () | 115149..115580 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CAY66_RS03340 () | 115580..116851 | + | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|