MGE detailed information
MGE type: Prophage MGE length: 47995 bp
Accession: NZ_CP028487 Location: 2963110..3011104 Organism: Yersinia massiliensis strain GTA Replicon: chromosome
Accession: NZ_CP028487 Location: 2963110..3011104 Organism: Yersinia massiliensis strain GTA Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DA391_RS13850 () | 2958226..2959557 | - | 1332 | WP_049605304.1 | L-fucose:H+ symporter permease | - |
| DA391_RS13855 () | 2959554..2961083 | - | 1530 | WP_057649939.1 | pentose kinase | - |
| DA391_RS13860 () | 2961164..2961913 | - | 750 | WP_108087860.1 | deoxyribose-phosphate aldolase | - |
| DA391_RS13865 () | 2962021..2962261 | + | 241 | Protein_2664 | YhcH/YjgK/YiaL family protein | - |
| DA391_RS13870 () | 2963110..2963352 | + | 243 | WP_049600571.1 | DinI family protein | - |
| DA391_RS13875 () | 2963370..2963612 | + | 243 | WP_167398232.1 | DinI-like family protein | - |
| DA391_RS13880 () | 2963979..2967065 | + | 3087 | WP_108087862.1 | hypothetical protein | VF |
| DA391_RS13885 () | 2967119..2967742 | - | 624 | WP_108087863.1 | tail fiber assembly protein | - |
| DA391_RS13890 () | 2967742..2969004 | - | 1263 | WP_108087864.1 | phage tail protein | - |
| DA391_RS13895 () | 2969055..2969651 | - | 597 | WP_108087865.1 | YmfQ family protein | - |
| DA391_RS13900 () | 2969648..2970784 | - | 1137 | WP_108087866.1 | baseplate J/gp47 family protein | - |
| DA391_RS13905 () | 2970788..2971225 | - | 438 | WP_108087867.1 | phage GP46 family protein | - |
| DA391_RS13910 () | 2971222..2971815 | - | 594 | WP_108087868.1 | phage baseplate assembly protein | - |
| DA391_RS13915 () | 2971812..2972885 | - | 1074 | WP_108087869.1 | phage tail protein | - |
| DA391_RS13920 () | 2972882..2974288 | - | 1407 | WP_108087870.1 | DNA circularization protein | - |
| DA391_RS13925 () | 2974346..2976148 | - | 1803 | WP_108087871.1 | transglycosylase SLT domain-containing protein | - |
| DA391_RS13930 () | 2976266..2976568 | - | 303 | WP_083159844.1 | phage tail assembly protein | - |
| DA391_RS13935 () | 2976570..2976944 | - | 375 | WP_049615551.1 | phage tail tube protein | - |
| DA391_RS13940 () | 2976957..2978447 | - | 1491 | WP_108087872.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| DA391_RS13945 () | 2978447..2978638 | - | 192 | WP_108087873.1 | DUF2635 domain-containing protein | - |
| DA391_RS13950 () | 2978644..2979189 | - | 546 | WP_108087874.1 | ATP-binding protein | - |
| DA391_RS13955 () | 2979186..2979530 | - | 345 | WP_108087875.1 | hypothetical protein | - |
| DA391_RS13960 () | 2979530..2980024 | - | 495 | WP_108087876.1 | hypothetical protein | - |
| DA391_RS13965 () | 2980026..2981072 | - | 1047 | WP_108087806.1 | major capsid protein | - |
| DA391_RS13970 () | 2981181..2981582 | - | 402 | WP_108087807.1 | head decoration protein | - |
| DA391_RS13975 () | 2981582..2982166 | - | 585 | WP_108087877.1 | DNA primase | - |
| DA391_RS13980 () | 2982166..2983023 | - | 858 | WP_108087878.1 | S49 family peptidase | - |
| DA391_RS13985 () | 2983020..2984588 | - | 1569 | WP_108088282.1 | phage portal protein | - |
| DA391_RS13990 () | 2984657..2984920 | - | 264 | WP_108087879.1 | phage head-tail adapter protein | - |
| DA391_RS13995 () | 2984929..2986800 | - | 1872 | WP_206186975.1 | phage terminase large subunit family protein | - |
| DA391_RS14000 () | 2986877..2987476 | - | 600 | WP_108087880.1 | RNA polymerase subunit sigma-70 | - |
| DA391_RS14005 () | 2987587..2988111 | - | 525 | WP_108087881.1 | HNH endonuclease | - |
| DA391_RS14010 () | 2988188..2988832 | - | 645 | WP_108087882.1 | hypothetical protein | - |
| DA391_RS14015 () | 2989065..2989343 | - | 279 | WP_145566229.1 | hypothetical protein | - |
| DA391_RS14020 () | 2989362..2989772 | - | 411 | WP_145566227.1 | hypothetical protein | - |
| DA391_RS14025 () | 2989783..2990304 | - | 522 | WP_108087885.1 | DUF2514 family protein | - |
| DA391_RS14030 () | 2990297..2990827 | - | 531 | WP_108087886.1 | lysozyme | - |
| DA391_RS14035 () | 2990855..2991070 | - | 216 | WP_050081311.1 | phage holin family protein | - |
| DA391_RS14040 () | 2991258..2991665 | - | 408 | WP_050879014.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| DA391_RS14045 () | 2991716..2991892 | - | 177 | WP_050879015.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| DA391_RS14050 () | 2992577..2992777 | - | 201 | WP_019210745.1 | hypothetical protein | - |
| DA391_RS14055 () | 2993110..2993511 | - | 402 | WP_108087887.1 | antitermination protein | - |
| DA391_RS14060 () | 2993699..2994715 | - | 1017 | WP_108087888.1 | hypothetical protein | - |
| DA391_RS14065 () | 2994815..2997484 | - | 2670 | WP_108087889.1 | TOPRIM and DUF927 domain-containing protein | - |
| DA391_RS14070 () | 2997481..2997876 | - | 396 | WP_032898470.1 | hypothetical protein | - |
| DA391_RS14075 () | 2997990..2998193 | - | 204 | WP_108087890.1 | hypothetical protein | - |
| DA391_RS14080 () | 2998196..2998366 | - | 171 | WP_049602772.1 | DUF4222 domain-containing protein | - |
| DA391_RS14085 () | 2998344..2998541 | - | 198 | WP_049602771.1 | hypothetical protein | - |
| DA391_RS14090 () | 2998534..2999328 | - | 795 | WP_049602770.1 | ORF6N domain-containing protein | - |
| DA391_RS14095 () | 2999321..2999617 | - | 297 | WP_049602802.1 | hypothetical protein | - |
| DA391_RS14100 () | 2999772..3001079 | - | 1308 | WP_108087891.1 | host cell division inhibitor Icd-like protein | - |
| DA391_RS14105 () | 3001076..3001588 | - | 513 | WP_108087892.1 | hypothetical protein | - |
| DA391_RS14110 () | 3001697..3001903 | - | 207 | WP_108087893.1 | AlpA family transcriptional regulator | - |
| DA391_RS14115 () | 3002071..3002988 | - | 918 | WP_108087894.1 | hypothetical protein | - |
| DA391_RS14120 () | 3003402..3004592 | - | 1191 | WP_108087895.1 | hypothetical protein ; Integrase | Integrase |
| DA391_RS14130 () | 3005112..3005441 | + | 330 | WP_049605313.1 | sulfurtransferase TusE | - |
| DA391_RS14135 () | 3005518..3005796 | - | 279 | WP_050286051.1 | acylphosphatase | - |
| DA391_RS14140 () | 3005938..3007199 | - | 1262 | Protein_2718 | Y-family DNA polymerase | - |
| DA391_RS14145 () | 3007183..3007620 | - | 438 | WP_050081473.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DA391_RS14155 () | 3008008..3009198 | + | 1191 | WP_172440364.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| DA391_RS14160 () | 3009260..3009577 | + | 318 | WP_050081471.1 | heat shock protein HspQ | - |
| DA391_RS14165 () | 3009691..3010104 | - | 414 | WP_019209546.1 | CoA-binding protein | - |
| DA391_RS14170 () | 3010421..3011104 | + | 684 | WP_167398177.1 | DUF2057 family protein | - |
| DA391_RS14175 () | 3011239..3011697 | + | 459 | WP_108087896.1 | methylglyoxal synthase | - |
| DA391_RS14180 () | 3011737..3013791 | - | 2055 | WP_108087897.1 | DNA helicase IV | - |
| DA391_RS14185 () | 3013986..3014438 | + | 453 | WP_042806371.1 | YccF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|