MGE detailed information
MGE type: Conjugative plasmid MGE length: 86657 bp
Accession: NZ_CP028485 Location: 1..86657 Organism: Escherichia coli strain E41-1 Replicon: plasmid p2
Accession: NZ_CP028485 Location: 1..86657 Organism: Escherichia coli strain E41-1 Replicon: plasmid p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U19_RS26980 () | 888..2441 | - | 1554 | WP_001492932.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| C2U19_RS26985 () | 2452..2904 | - | 453 | WP_032310255.1 | hypothetical protein | VF |
| C2U19_RS26990 () | 2891..4186 | - | 1296 | WP_110204519.1 | hypothetical protein | VF |
| C2U19_RS26995 () | 4179..5861 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| C2U19_RS27000 () | 5875..6312 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| C2U19_RS27005 () | 6312..7379 | - | 1068 | WP_012783947.1 | hypothetical protein | VF |
| C2U19_RS27015 () | 8003..8299 | - | 297 | WP_050571830.1 | hypothetical protein | - |
| C2U19_RS27020 () | 8466..8720 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| C2U19_RS27025 () | 8882..9433 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| C2U19_RS27035 () | 9606..10289 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| C2U19_RS27045 () | 10543..11076 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| C2U19_RS27055 () | 11518..11805 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| C2U19_RS27060 () | 11723..11986 | - | 264 | WP_001749178.1 | ash family protein | - |
| C2U19_RS27075 () | 12959..13990 | + | 1032 | WP_048257187.1 | replication initiation protein | - |
| C2U19_RS27090 () | 15059..15568 | - | 510 | WP_000045394.1 | hypothetical protein | - |
| C2U19_RS27095 () | 15624..16226 | - | 603 | WP_048257190.1 | proQ/FINO family protein | - |
| C2U19_RS27105 () | 16580..17926 | + | 1347 | WP_001132033.1 | hypothetical protein | - |
| C2U19_RS27115 () | 18205..20085 | + | 1881 | WP_001283344.1 | colicin 1A | - |
| C2U19_RS27120 () | 20107..20385 | - | 279 | WP_000966596.1 | Colicin-Ia immunity protein | - |
| C2U19_RS27130 () | 20570..20917 | + | 348 | WP_016231295.1 | hypothetical protein | - |
| C2U19_RS27135 () | 20937..21527 | - | 591 | WP_024227072.1 | hypothetical protein | - |
| C2U19_RS27140 () | 21527..21784 | - | 258 | WP_000371885.1 | hypothetical protein | - |
| C2U19_RS27150 () | 22353..22766 | + | 414 | WP_000465036.1 | hypothetical protein | - |
| C2U19_RS27155 () | 22768..23547 | + | 780 | WP_024227071.1 | site-specific integrase | - |
| C2U19_RS27160 () | 23727..24371 | + | 645 | WP_001144036.1 | ParA family protein | - |
| C2U19_RS27165 () | 24458..24766 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| C2U19_RS27170 () | 25180..26160 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| C2U19_RS27175 () | 26153..26569 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| C2U19_RS27180 () | 26571..27845 | - | 1275 | WP_110204520.1 | Y-family DNA polymerase | - |
| C2U19_RS27185 () | 27845..28282 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C2U19_RS27190 () | 28279..28527 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| C2U19_RS27200 () | 28945..29847 | + | 903 | WP_126122062.1 | DUF1281 domain-containing protein | - |
| C2U19_RS27205 () | 29844..30155 | + | 312 | WP_032143956.1 | hypothetical protein | - |
| C2U19_RS27210 () | 30231..30914 | + | 684 | WP_001474699.1 | DNA methylase | - |
| C2U19_RS27215 () | 30915..31136 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| C2U19_RS27220 () | 31150..31584 | + | 435 | WP_053007830.1 | DUF1380 family protein | - |
| C2U19_RS28335 () | 31629..32398 | + | 770 | Protein_37 | hypothetical protein | - |
| C2U19_RS27240 () | 32939..33241 | + | 303 | WP_001436678.1 | antirestriction protein | - |
| C2U19_RS27245 () | 33288..33710 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| C2U19_RS27250 () | 33707..33898 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| C2U19_RS27270 () | 34669..35196 | + | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| C2U19_RS27275 () | 35254..35487 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| C2U19_RS27280 () | 35546..37504 | + | 1959 | WP_058649951.1 | ParB/RepB/Spo0J family partition protein | - |
| C2U19_RS27285 () | 37559..37993 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| C2U19_RS27290 () | 37990..38709 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| C2U19_RS27295 () | 38706..39302 | + | 597 | WP_000978005.1 | hypothetical protein | - |
| C2U19_RS27305 () | 39765..40265 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| C2U19_RS27320 () | 40991..41425 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| C2U19_RS27325 () | 41518..41784 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| C2U19_RS27330 () | 41849..42763 | + | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| C2U19_RS27335 () | 42763..43008 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| C2U19_RS27340 () | 43039..43290 | - | 252 | WP_000148280.1 | helix-turn-helix domain-containing protein | - |
| C2U19_RS28340 () | 43324..43521 | - | 198 | WP_001161112.1 | hypothetical protein | - |
| C2U19_RS27355 () | 43869..44717 | + | 849 | WP_058649950.1 | DUF4942 domain-containing protein | - |
| C2U19_RS27360 () | 44803..45138 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| C2U19_RS27365 () | 45372..45704 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| C2U19_RS27370 () | 45715..48414 | + | 2700 | WP_006855641.1 | Protein TraI | Relaxase |
| C2U19_RS27375 () | 48451..50742 | - | 2292 | WP_001289275.1 | hypothetical protein | - |
| C2U19_RS27380 () | 50735..51805 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| C2U19_RS27385 () | 51824..53032 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| C2U19_RS27390 () | 53339..54430 | - | 1092 | WP_000426061.1 | hypothetical protein | - |
| - () | 54633..54693 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 54633..54693 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 54633..54693 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 54633..54693 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| C2U19_RS27395 () | 54745..54897 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| C2U19_RS27400 () | 54969..55220 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| C2U19_RS27405 () | 55520..55816 | + | 297 | WP_011264046.1 | hypothetical protein | - |
| C2U19_RS28345 () | 55881..56057 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| C2U19_RS27410 () | 56449..56658 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| C2U19_RS27415 () | 56730..57392 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C2U19_RS27420 () | 57463..59631 | - | 2169 | WP_058649949.1 | DotA/TraY family protein | - |
| C2U19_RS27425 () | 59728..60312 | - | 585 | WP_001037996.1 | IncI1-type conjugal transfer protein TraX | - |
| C2U19_RS27430 () | 60341..61543 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| C2U19_RS27435 () | 61510..62124 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| C2U19_RS27440 () | 62124..65168 | - | 3045 | WP_001024789.1 | IncI1-type conjugal transfer protein TraU | - |
| C2U19_RS27445 () | 65258..66058 | - | 801 | WP_001164784.1 | IncI1-type conjugal transfer protein TraT | - |
| C2U19_RS27450 () | 66042..66230 | - | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| C2U19_RS27455 () | 66294..66698 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| C2U19_RS27460 () | 66749..67276 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| C2U19_RS27465 () | 67276..67980 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| C2U19_RS27470 () | 67980..69269 | - | 1290 | WP_042004726.1 | conjugal transfer protein TraO | - |
| C2U19_RS27475 () | 69272..70255 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| C2U19_RS27480 () | 70266..70958 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| C2U19_RS27485 () | 70955..71302 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| C2U19_RS27490 () | 71320..75087 | - | 3768 | WP_001141527.1 | DNA primase | - |
| C2U19_RS27495 () | 75177..75728 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| C2U19_RS27500 () | 75743..76033 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| C2U19_RS27505 () | 76030..77178 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| C2U19_RS27510 () | 77175..77993 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| C2U19_RS27515 () | 77990..78448 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| C2U19_RS27520 () | 78842..79426 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| C2U19_RS27525 () | 79486..80688 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| C2U19_RS27530 () | 80774..81598 | - | 825 | WP_110204523.1 | conjugal transfer protein TraE | - |
| C2U19_RS27535 () | 81749..82903 | - | 1155 | WP_001139955.1 | integrase | - |
| C2U19_RS27540 () | 83158..83305 | + | 148 | Protein_92 | shufflon protein A | - |
| C2U19_RS27545 () | 83302..84591 | - | 1290 | Protein_93 | hypothetical protein | VF |
| C2U19_RS27550 () | 84591..85247 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| C2U19_RS27555 () | 85232..85792 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| C2U19_RS27560 () | 85802..86416 | - | 615 | WP_001542527.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|