MGE detailed information
MGE type: Genomic_island MGE length: 31747 bp
Accession: NZ_CP028481 Location: 2665149..2696895 Organism: Vibrio parahaemolyticus strain S107-1 Replicon: chromosome
Accession: NZ_CP028481 Location: 2665149..2696895 Organism: Vibrio parahaemolyticus strain S107-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DA442_RS13580 () | 2660350..2662749 | - | 2400 | WP_134990652.1 | type IV secretion system protein TraC | - |
| DA442_RS13585 () | 2662749..2663441 | - | 693 | WP_134990653.1 | DsbC family protein | - |
| DA442_RS13590 () | 2663783..2664721 | + | 939 | WP_167733321.1 | Abi family protein | - |
| DA442_RS13595 () | 2665149..2665685 | + | 537 | WP_134990655.1 | hypothetical protein | - |
| DA442_RS13600 () | 2665840..2666106 | + | 267 | WP_000212004.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DA442_RS13605 () | 2666097..2666603 | + | 507 | WP_045595200.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DA442_RS13610 () | 2666644..2667030 | - | 387 | WP_004249359.1 | hypothetical protein | - |
| DA442_RS13615 () | 2667027..2667599 | - | 573 | WP_167733322.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DA442_RS13620 () | 2667674..2668963 | - | 1290 | WP_134990657.1 | TraB/VirB10 family protein | - |
| DA442_RS13625 () | 2668966..2669862 | - | 897 | WP_134990708.1 | type-F conjugative transfer system secretin TraK | - |
| DA442_RS13630 () | 2669846..2670472 | - | 627 | WP_134990658.1 | pilus assembly protein | - |
| DA442_RS13635 () | 2670469..2670750 | - | 282 | WP_000433891.1 | type IV conjugative transfer system protein TraL | - |
| DA442_RS13640 () | 2670984..2671274 | + | 291 | WP_134990659.1 | HigA family addiction module antidote protein | - |
| DA442_RS13645 () | 2671476..2672582 | - | 1107 | WP_134990709.1 | Fic family protein | - |
| DA442_RS13650 () | 2672736..2673371 | - | 636 | WP_134990660.1 | DUF4400 domain-containing protein | - |
| DA442_RS13655 () | 2673358..2673918 | - | 561 | WP_134990661.1 | conjugative transfer protein | - |
| DA442_RS13660 () | 2673928..2675748 | - | 1821 | WP_134990662.1 | conjugative transfer system coupling protein TraD | - |
| DA442_RS13665 () | 2675796..2677946 | - | 2151 | WP_134990663.1 | TraI domain-containing protein | - |
| DA442_RS13670 () | 2678101..2680752 | - | 2652 | WP_134990664.1 | AAA family ATPase | - |
| DA442_RS13675 () | 2680796..2682826 | - | 2031 | WP_209019890.1 | protease Lon-related BREX system protein BrxL | - |
| DA442_RS13680 () | 2682888..2685545 | - | 2658 | WP_134990666.1 | BREX-1 system phosphatase PglZ type A | - |
| DA442_RS13685 () | 2685545..2689183 | - | 3639 | WP_134990667.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| DA442_RS13690 () | 2689187..2689945 | - | 759 | WP_134990668.1 | hypothetical protein | - |
| DA442_RS13695 () | 2689942..2691111 | - | 1170 | WP_134990669.1 | AAA family ATPase | - |
| DA442_RS13700 () | 2691122..2694799 | - | 3678 | WP_103201396.1 | BREX system P-loop protein BrxC | - |
| DA442_RS13705 () | 2694818..2695402 | - | 585 | WP_134990670.1 | DUF1788 domain-containing protein | - |
| DA442_RS13710 () | 2695399..2695998 | - | 600 | WP_001963840.1 | DUF1819 family protein | - |
| DA442_RS13715 () | 2696008..2696934 | - | 927 | WP_209019886.1 | WYL domain-containing protein | - |
| DA442_RS13720 () | 2697003..2697317 | - | 315 | WP_052921407.1 | hypothetical protein | - |
| DA442_RS13725 () | 2697391..2698299 | - | 909 | WP_134990672.1 | DNA polymerase III subunit epsilon | - |
| DA442_RS13730 () | 2698682..2698939 | - | 258 | WP_134990673.1 | hypothetical protein | - |
| DA442_RS13735 () | 2698938..2699387 | + | 450 | WP_134990674.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DA442_RS13740 () | 2699395..2700663 | + | 1269 | WP_134990675.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| DA442_RS13745 () | 2700674..2701117 | - | 444 | WP_024024504.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|