MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 120253 bp
Accession: NZ_CP028433 Location: 1..120253 Organism: Escherichia coli strain RM9975 Replicon: plasmid pRM9975-1
Accession: NZ_CP028433 Location: 1..120253 Organism: Escherichia coli strain RM9975 Replicon: plasmid pRM9975-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRM9975_RS27745 () | 1..1056 | + | 1056 | WP_001293471.1 | replication protein RepA | - |
| ECRM9975_RS27750 () | 1156..2369 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| ECRM9975_RS27755 () | 2716..3929 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| ECRM9975_RS27760 () | 4172..4384 | - | 213 | WP_001229345.1 | hypothetical protein | - |
| ECRM9975_RS27765 () | 4384..4719 | - | 336 | WP_000644408.1 | hypothetical protein | - |
| ECRM9975_RS27775 () | 4935..5210 | - | 276 | WP_001755515.1 | hypothetical protein | - |
| ECRM9975_RS27780 () | 5266..5691 | - | 426 | WP_033803584.1 | hypothetical protein | - |
| ECRM9975_RS27785 () | 5783..6613 | - | 831 | WP_000715581.1 | SPFH/Band 7/PHB domain protein | - |
| ECRM9975_RS27790 () | 6617..6817 | - | 201 | WP_021520138.1 | hypothetical protein | - |
| ECRM9975_RS27795 () | 6910..7623 | - | 714 | Protein_9 | recombinase RecA | - |
| ECRM9975_RS27800 () | 7675..8888 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| ECRM9975_RS27805 () | 8872..12441 | + | 3570 | WP_112033862.1 | DNA polymerase III subunit alpha | - |
| ECRM9975_RS27810 () | 12745..12960 | - | 216 | WP_000066497.1 | cold shock protein CspG | - |
| ECRM9975_RS27815 () | 13290..13853 | - | 564 | WP_001240351.1 | hypothetical protein | - |
| ECRM9975_RS27825 () | 14393..14824 | + | 432 | WP_001090697.1 | hypothetical protein | - |
| ECRM9975_RS27830 () | 14942..15982 | + | 1041 | WP_112033863.1 | regulator | - |
| ECRM9975_RS27835 () | 16043..16987 | + | 945 | WP_001755518.1 | 5'-3' exonuclease SAM fold family protein | - |
| ECRM9975_RS27840 () | 16987..17253 | + | 267 | WP_000920224.1 | hypothetical protein | - |
| ECRM9975_RS29570 () | 17256..17447 | + | 192 | Protein_18 | hypothetical protein | - |
| ECRM9975_RS29340 () | 17361..17699 | - | 339 | WP_162630519.1 | hypothetical protein | - |
| ECRM9975_RS27860 () | 19123..20358 | - | 1236 | WP_112033864.1 | AAA family ATPase | - |
| ECRM9975_RS27865 () | 20454..22562 | - | 2109 | WP_112033865.1 | cobalamin biosynthesis protein CobT | - |
| ECRM9975_RS27870 () | 22661..22873 | - | 213 | WP_001098353.1 | hypothetical protein | - |
| ECRM9975_RS27875 () | 23125..23511 | + | 387 | WP_001282576.1 | transcriptional regulator | - |
| ECRM9975_RS27880 () | 23506..24609 | - | 1104 | WP_000797845.1 | site-specific integrase | - |
| ECRM9975_RS27885 () | 24783..25193 | - | 411 | WP_072328047.1 | type II toxin-antitoxin system YafO family toxin | - |
| ECRM9975_RS27890 () | 25203..25811 | - | 609 | WP_169017105.1 | hypothetical protein | - |
| ECRM9975_RS27895 () | 25907..26152 | - | 246 | WP_072328049.1 | GrxA family glutaredoxin | - |
| ECRM9975_RS27900 () | 26326..27234 | + | 909 | WP_001755525.1 | hypothetical protein | - |
| ECRM9975_RS27920 () | 28747..29037 | - | 291 | WP_000067985.1 | hypothetical protein | - |
| ECRM9975_RS29575 () | 29034..29186 | - | 153 | WP_000613554.1 | hypothetical protein | - |
| ECRM9975_RS27925 () | 29183..29398 | - | 216 | WP_000636536.1 | hypothetical protein | - |
| ECRM9975_RS27930 () | 29395..30717 | - | 1323 | WP_104772314.1 | DNA ligase | - |
| ECRM9975_RS27935 () | 30714..30971 | - | 258 | WP_112033866.1 | hypothetical protein | - |
| ECRM9975_RS27940 () | 31252..32034 | - | 783 | WP_104772315.1 | hypothetical protein | - |
| ECRM9975_RS27945 () | 32160..32573 | - | 414 | WP_000038288.1 | hypothetical protein | - |
| ECRM9975_RS27950 () | 32804..33949 | + | 1146 | WP_059244885.1 | Secretory immunoglobulin A-binding protein EsiB | VF |
| ECRM9975_RS27955 () | 33941..35056 | - | 1116 | WP_162630520.1 | DNA primase | - |
| ECRM9975_RS27960 () | 35204..36544 | - | 1341 | WP_032203361.1 | AAA family ATPase | - |
| ECRM9975_RS27965 () | 36588..37328 | - | 741 | WP_001717320.1 | hypothetical protein | - |
| ECRM9975_RS27970 () | 37611..38378 | + | 768 | WP_000342417.1 | hypothetical protein | - |
| ECRM9975_RS27975 () | 38431..38784 | - | 354 | WP_160378290.1 | hypothetical protein | - |
| ECRM9975_RS27980 () | 38790..39458 | - | 669 | WP_000161228.1 | AAA family ATPase | - |
| ECRM9975_RS27985 () | 39634..40847 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| ECRM9975_RS27990 () | 41090..41359 | + | 270 | WP_001351987.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| ECRM9975_RS27995 () | 41367..41888 | + | 522 | WP_112033868.1 | GNAT family N-acetyltransferase | Toxin Detail |
| ECRM9975_RS28005 () | 42057..42308 | - | 252 | WP_000901559.1 | hypothetical protein | - |
| ECRM9975_RS28010 () | 42310..43002 | - | 693 | WP_012640731.1 | hypothetical protein | - |
| ECRM9975_RS28015 () | 43016..43339 | - | 324 | WP_000064175.1 | hypothetical protein | - |
| ECRM9975_RS28020 () | 43542..46205 | - | 2664 | WP_112033869.1 | tail fiber protein | - |
| ECRM9975_RS28035 () | 47661..51530 | - | 3870 | Protein_51 | DUF1983 domain-containing protein | - |
| ECRM9975_RS28045 () | 52841..53701 | - | 861 | Protein_53 | host specificity protein J | - |
| ECRM9975_RS28050 () | 53719..54312 | - | 594 | WP_024171470.1 | tail assembly protein | - |
| ECRM9975_RS28055 () | 54300..55097 | - | 798 | WP_089568137.1 | C40 family peptidase | - |
| ECRM9975_RS28060 () | 55090..55787 | - | 698 | Protein_56 | phage minor tail protein L | - |
| ECRM9975_RS28065 () | 55870..56205 | - | 336 | WP_053900116.1 | phage tail protein | - |
| ECRM9975_RS28070 () | 56248..60807 | - | 4560 | WP_089568136.1 | tape measure protein | - |
| ECRM9975_RS28075 () | 60815..61039 | - | 225 | WP_000952686.1 | hypothetical protein | - |
| ECRM9975_RS28080 () | 61165..61482 | - | 318 | WP_000163861.1 | hypothetical protein | - |
| ECRM9975_RS28085 () | 61538..62284 | - | 747 | WP_048958837.1 | Ig domain-containing protein | - |
| ECRM9975_RS28090 () | 62359..62742 | - | 384 | WP_061158047.1 | minor capsid protein | - |
| ECRM9975_RS28095 () | 62744..63217 | - | 474 | WP_000523628.1 | hypothetical protein | - |
| ECRM9975_RS28100 () | 63208..63552 | - | 345 | WP_001027663.1 | hypothetical protein | - |
| ECRM9975_RS28105 () | 63632..64465 | - | 834 | WP_061158048.1 | hypothetical protein | - |
| ECRM9975_RS28110 () | 64465..64899 | - | 435 | WP_061158049.1 | hypothetical protein | - |
| ECRM9975_RS28115 () | 64944..65864 | - | 921 | WP_061158050.1 | Ig domain-containing protein | - |
| ECRM9975_RS28120 () | 65938..66813 | - | 876 | WP_061158051.1 | hypothetical protein | - |
| ECRM9975_RS28125 () | 66839..67726 | - | 888 | WP_061158052.1 | hypothetical protein | - |
| ECRM9975_RS28130 () | 67748..69322 | - | 1575 | WP_000422361.1 | phage portal protein | - |
| ECRM9975_RS28135 () | 69349..70605 | - | 1257 | WP_001007299.1 | phage terminase large subunit | - |
| ECRM9975_RS28140 () | 70605..71237 | - | 633 | WP_048958825.1 | hypothetical protein | - |
| ECRM9975_RS28145 () | 71436..71702 | - | 267 | WP_000176292.1 | hypothetical protein | - |
| ECRM9975_RS28150 () | 71712..72602 | - | 891 | WP_000129633.1 | hypothetical protein | - |
| ECRM9975_RS28155 () | 72599..73264 | - | 666 | WP_061158053.1 | ATP-binding cassette domain-containing protein | - |
| ECRM9975_RS28160 () | 73261..73929 | - | 669 | WP_000161986.1 | ParB/Srx family N-terminal domain-containing protein | - |
| ECRM9975_RS28165 () | 73929..74609 | - | 681 | WP_000382660.1 | ParB N-terminal domain-containing protein | - |
| ECRM9975_RS28170 () | 74692..76251 | + | 1560 | WP_061158054.1 | DEAD/DEAH box helicase | - |
| ECRM9975_RS28175 () | 76254..76532 | + | 279 | WP_001291061.1 | hypothetical protein | - |
| ECRM9975_RS28180 () | 76565..77164 | + | 600 | WP_061158055.1 | hypothetical protein | - |
| ECRM9975_RS28185 () | 77550..78350 | - | 801 | WP_061158056.1 | hypothetical protein | - |
| ECRM9975_RS28190 () | 78453..78974 | + | 522 | WP_023145147.1 | repressor of phase-1 flagellin | - |
| ECRM9975_RS28195 () | 79270..79920 | + | 651 | WP_029305755.1 | hypothetical protein | - |
| ECRM9975_RS28200 () | 79970..80173 | + | 204 | WP_000255469.1 | hypothetical protein | - |
| ECRM9975_RS28205 () | 80194..80421 | + | 228 | WP_059277742.1 | hypothetical protein | - |
| ECRM9975_RS28210 () | 80796..81001 | + | 206 | Protein_86 | hypothetical protein | - |
| ECRM9975_RS28215 () | 81031..81513 | - | 483 | WP_001009193.1 | hypothetical protein | - |
| ECRM9975_RS28220 () | 81718..81999 | - | 282 | WP_086118731.1 | ABC transporter | - |
| ECRM9975_RS28225 () | 82476..82541 | - | 66 | Protein_89 | ABC transporter | - |
| ECRM9975_RS28230 () | 82844..83239 | - | 396 | WP_047659410.1 | hypothetical protein | - |
| ECRM9975_RS28235 () | 83366..83677 | - | 312 | WP_000749407.1 | hypothetical protein | - |
| ECRM9975_RS28240 () | 83831..84160 | - | 330 | WP_089568284.1 | hypothetical protein | - |
| ECRM9975_RS29350 () | 85691..86251 | - | 561 | WP_021520100.1 | hypothetical protein | - |
| ECRM9975_RS28250 () | 86414..86599 | - | 186 | WP_000910476.1 | hypothetical protein | - |
| ECRM9975_RS28255 () | 86636..86935 | - | 300 | WP_021520099.1 | hypothetical protein | - |
| ECRM9975_RS28260 () | 87097..89130 | - | 2034 | WP_021547919.1 | methionine--tRNA ligase | - |
| ECRM9975_RS28265 () | 89288..90388 | + | 1101 | WP_000004356.1 | iron-sulfur cluster carrier protein ApbC | - |
| ECRM9975_RS28270 () | 90426..90815 | - | 390 | WP_000506720.1 | DNA repair protein | - |
| ECRM9975_RS28280 () | 91617..92243 | - | 627 | WP_000108705.1 | hypothetical protein | - |
| ECRM9975_RS29580 () | 92240..92623 | - | 384 | WP_001355893.1 | hypothetical protein | - |
| ECRM9975_RS29585 () | 92620..92841 | - | 222 | WP_001718095.1 | hypothetical protein | - |
| ECRM9975_RS29590 () | 92860..93108 | - | 249 | Protein_102 | DUF551 domain-containing protein | - |
| ECRM9975_RS29595 () | 93133..93537 | - | 405 | Protein_103 | DUF551 domain-containing protein | - |
| ECRM9975_RS28295 () | 93537..93722 | - | 186 | WP_053272001.1 | hypothetical protein | - |
| ECRM9975_RS28300 () | 93697..94263 | - | 567 | WP_053272000.1 | ead/Ea22-like family protein | - |
| ECRM9975_RS28305 () | 94260..94715 | - | 456 | WP_053271999.1 | hypothetical protein | - |
| ECRM9975_RS28310 () | 94854..95234 | - | 381 | WP_053271998.1 | hypothetical protein | - |
| ECRM9975_RS28315 () | 95234..95938 | - | 705 | WP_052988679.1 | hypothetical protein | - |
| ECRM9975_RS28320 () | 96000..97685 | - | 1686 | WP_001090447.1 | DUF4942 domain-containing protein | - |
| ECRM9975_RS28325 () | 97789..98403 | - | 615 | WP_000467662.1 | hypothetical protein | - |
| ECRM9975_RS28330 () | 98406..98687 | - | 282 | WP_021533177.1 | hypothetical protein | - |
| ECRM9975_RS28335 () | 98743..99312 | - | 570 | WP_001718087.1 | hypothetical protein | - |
| ECRM9975_RS28340 () | 99452..99610 | - | 159 | WP_014962273.1 | DUF3927 family protein | - |
| ECRM9975_RS28345 () | 99610..100035 | - | 426 | WP_021533179.1 | tellurite resistance TerB family protein | - |
| ECRM9975_RS28350 () | 100129..100326 | - | 198 | WP_021533180.1 | hypothetical protein | - |
| ECRM9975_RS29355 () | 100336..100830 | - | 495 | WP_021533181.1 | hypothetical protein | - |
| ECRM9975_RS28360 () | 100976..101623 | - | 648 | WP_162630521.1 | ribonuclease HI | - |
| ECRM9975_RS28365 () | 102154..102384 | - | 231 | WP_032203380.1 | hypothetical protein | - |
| ECRM9975_RS28370 () | 102570..103163 | - | 594 | WP_000559568.1 | phage N-6-adenine-methyltransferase | - |
| ECRM9975_RS28375 () | 103347..104156 | - | 810 | WP_053902537.1 | hypothetical protein | - |
| ECRM9975_RS28380 () | 104315..104830 | - | 516 | WP_112033873.1 | 3'-5' exonuclease | - |
| ECRM9975_RS28390 () | 106195..106614 | - | 420 | WP_001718079.1 | hypothetical protein | - |
| ECRM9975_RS28395 () | 106676..107320 | - | 645 | WP_000386469.1 | AAA family ATPase | - |
| ECRM9975_RS28400 () | 107320..107796 | - | 477 | WP_000781810.1 | dihydrofolate reductase | - |
| ECRM9975_RS28405 () | 107793..108194 | - | 402 | WP_000289391.1 | hypothetical protein | - |
| ECRM9975_RS28410 () | 108208..109311 | - | 1104 | WP_162630522.1 | thymidylate synthase | - |
| ECRM9975_RS28415 () | 109483..110352 | - | 870 | WP_001011861.1 | hypothetical protein | - |
| ECRM9975_RS28420 () | 110430..111572 | - | 1143 | WP_000122502.1 | ribonucleotide-diphosphate reductase subunit beta | - |
| ECRM9975_RS28425 () | 111679..113994 | - | 2316 | WP_000623683.1 | ribonucleoside-diphosphate reductase subunit alpha | - |
| ECRM9975_RS28430 () | 114068..114637 | - | 570 | WP_000037962.1 | hypothetical protein | - |
| ECRM9975_RS28435 () | 114647..115390 | - | 744 | WP_112033874.1 | hypothetical protein | - |
| ECRM9975_RS28440 () | 115380..117296 | - | 1917 | WP_021520140.1 | AAA family ATPase | - |
| ECRM9975_RS28450 () | 117526..118611 | - | 1086 | WP_000174803.1 | metallophosphoesterase | - |
| ECRM9975_RS28455 () | 118866..119510 | - | 645 | WP_000364573.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|