MGE detailed information
MGE type: Prophage MGE length: 44832 bp
Accession: NZ_CP028432 Location: 1345863..1390694 Organism: Escherichia coli strain RM9975 Replicon: chromosome
Accession: NZ_CP028432 Location: 1345863..1390694 Organism: Escherichia coli strain RM9975 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRM9975_RS07045 () | 1341595..1342416 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| ECRM9975_RS07050 () | 1342555..1343343 | - | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| ECRM9975_RS07055 () | 1343340..1343801 | - | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| ECRM9975_RS07060 () | 1343859..1344905 | - | 1047 | WP_000759338.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| ECRM9975_RS07065 () | 1344902..1345696 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| ECRM9975_RS07070 () | 1345863..1346981 | - | 1119 | WP_000074981.1 | PTS system glucitol/sorbitol-specific EIIA component ; Integrase | Integrase |
| ECRM9975_RS07075 () | 1346950..1347219 | - | 270 | WP_000003742.1 | excisionase | - |
| ECRM9975_RS07080 () | 1347281..1349746 | - | 2466 | WP_000048442.1 | exonuclease | - |
| ECRM9975_RS07085 () | 1349839..1350030 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| ECRM9975_RS07090 () | 1350027..1350215 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| ECRM9975_RS07100 () | 1350699..1350917 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| ECRM9975_RS07105 () | 1350958..1351347 | - | 390 | WP_001447517.1 | hypothetical protein | - |
| ECRM9975_RS07115 () | 1351643..1351921 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ECRM9975_RS07120 () | 1351923..1352114 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| ECRM9975_RS07125 () | 1352135..1352506 | - | 372 | WP_001169687.1 | hypothetical protein | - |
| ECRM9975_RS07130 () | 1352604..1352906 | + | 303 | WP_001444689.1 | transcriptional regulator | - |
| ECRM9975_RS07135 () | 1352903..1353328 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| ECRM9975_RS07140 () | 1353351..1354313 | + | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| ECRM9975_RS07145 () | 1354354..1354764 | + | 411 | Protein_1289 | DUF977 family protein | - |
| ECRM9975_RS07155 () | 1356059..1356199 | + | 141 | WP_072058819.1 | type I toxin-antitoxin system Hok family toxin | - |
| ECRM9975_RS07165 () | 1356367..1356639 | + | 273 | WP_012817871.1 | hypothetical protein | - |
| ECRM9975_RS07170 () | 1356641..1357696 | + | 1056 | WP_001369253.1 | DUF968 domain-containing protein | - |
| ECRM9975_RS07175 () | 1357697..1358062 | + | 366 | WP_000140024.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ECRM9975_RS07180 () | 1358071..1358601 | + | 531 | WP_000640048.1 | DUF1133 family protein | - |
| ECRM9975_RS29045 () | 1358843..1359040 | + | 198 | WP_000917750.1 | hypothetical protein | - |
| ECRM9975_RS07190 () | 1359191..1360249 | + | 1059 | WP_000935544.1 | site-specific DNA-methyltransferase | - |
| ECRM9975_RS07210 () | 1361046..1362896 | + | 1851 | WP_000874287.1 | DUF1737 domain-containing protein | - |
| ECRM9975_RS07220 () | 1363335..1363550 | + | 216 | WP_024164617.1 | class II holin family protein | - |
| ECRM9975_RS07225 () | 1363555..1363899 | + | 345 | WP_000731236.1 | YdfR family protein | - |
| ECRM9975_RS07230 () | 1363950..1364483 | + | 534 | WP_000992167.1 | lysozyme | - |
| ECRM9975_RS07235 () | 1364754..1365323 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| ECRM9975_RS29050 () | 1365323..1365469 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| ECRM9975_RS29060 () | 1365697..1365882 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| ECRM9975_RS07245 () | 1366307..1366534 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| ECRM9975_RS07250 () | 1366576..1366941 | + | 366 | WP_000279788.1 | HNH endonuclease | - |
| ECRM9975_RS07260 () | 1367232..1367795 | + | 564 | WP_000958415.1 | terminase small subunit | - |
| ECRM9975_RS07265 () | 1367792..1369453 | + | 1662 | WP_001369319.1 | terminase large subunit | - |
| ECRM9975_RS07270 () | 1369517..1371454 | + | 1938 | WP_000172984.1 | phage major capsid protein | - |
| ECRM9975_RS07275 () | 1371499..1371720 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| ECRM9975_RS07280 () | 1371666..1374412 | + | 2747 | Protein_1311 | phage portal protein | - |
| ECRM9975_RS07285 () | 1374409..1374735 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| ECRM9975_RS07290 () | 1374745..1375095 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| ECRM9975_RS07295 () | 1375092..1375538 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| ECRM9975_RS07300 () | 1375535..1375879 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| ECRM9975_RS07305 () | 1375946..1376662 | + | 717 | WP_001275472.1 | tail protein | - |
| ECRM9975_RS07310 () | 1376668..1377042 | + | 375 | WP_001030042.1 | phage tail assembly chaperone | - |
| ECRM9975_RS07315 () | 1377138..1377347 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| ECRM9975_RS07320 () | 1377399..1380641 | + | 3243 | WP_000212932.1 | phage tail tape measure protein | - |
| ECRM9975_RS07325 () | 1380634..1380975 | + | 342 | WP_000807928.1 | phage tail protein | - |
| ECRM9975_RS07330 () | 1380975..1381673 | + | 699 | WP_001447444.1 | phage minor tail protein L | - |
| ECRM9975_RS07335 () | 1381690..1382010 | - | 321 | WP_001302649.1 | Arc family DNA-binding protein | - |
| ECRM9975_RS07340 () | 1382118..1382291 | + | 174 | WP_001154345.1 | Arc family DNA-binding protein | - |
| ECRM9975_RS07345 () | 1382362..1383284 | + | 923 | Protein_1324 | phage antirepressor Ant | - |
| ECRM9975_RS07350 () | 1383339..1384076 | + | 738 | WP_000967279.1 | C40 family peptidase | - |
| ECRM9975_RS07355 () | 1384022..1384654 | + | 633 | WP_122996286.1 | tail assembly protein | - |
| ECRM9975_RS07360 () | 1384891..1388370 | + | 3480 | WP_000514853.1 | host specificity protein J | - |
| ECRM9975_RS07365 () | 1388437..1389036 | + | 600 | WP_001230459.1 | hypothetical protein | VF |
| ECRM9975_RS07370 () | 1389101..1390423 | + | 1323 | WP_000268887.1 | ISNCY family transposase KIS | Transposase |
| ECRM9975_RS07375 () | 1390425..1390694 | + | 270 | WP_001023356.1 | phage tail fiber C-terminal domain-containing protein | - |
| ECRM9975_RS29065 () | 1390696..1390788 | + | 93 | Protein_1331 | tail assembly protein | - |
| ECRM9975_RS29070 () | 1390801..1390890 | + | 90 | WP_115801847.1 | hypothetical protein | - |
| ECRM9975_RS07380 () | 1390910..1393258 | + | 2349 | WP_001301673.1 | type III secretion system effector E3 ubiquitin ligase NleL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|