MGE detailed information
MGE type: Prophage MGE length: 102332 bp
Accession: NZ_CP028429 Location: 1654600..1756931 Organism: Escherichia coli strain RM9131 Replicon: chromosome
Accession: NZ_CP028429 Location: 1654600..1756931 Organism: Escherichia coli strain RM9131 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRM9131_RS29615 () | 1650589..1650636 | + | 48 | WP_211180494.1 | protein YnaN | - |
| ECRM9131_RS08810 () | 1650650..1651633 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| ECRM9131_RS08815 () | 1651908..1652081 | + | 174 | WP_001296046.1 | hypothetical protein | - |
| ECRM9131_RS08820 () | 1652111..1653484 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| ECRM9131_RS08825 () | 1653613..1654548 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| ECRM9131_RS08830 () | 1654600..1655835 | - | 1236 | WP_000040839.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| ECRM9131_RS08835 () | 1655837..1656052 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| ECRM9131_RS08840 () | 1656152..1656340 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 1656156..1656334 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1656156..1656334 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1656156..1656334 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1656156..1656334 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| ECRM9131_RS08845 () | 1656378..1656527 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| ECRM9131_RS08850 () | 1656583..1657392 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| ECRM9131_RS08855 () | 1657385..1659985 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| ECRM9131_RS08860 () | 1660087..1660362 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| ECRM9131_RS08865 () | 1660437..1660607 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| ECRM9131_RS08870 () | 1660607..1660828 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| ECRM9131_RS08880 () | 1661270..1661758 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| ECRM9131_RS08885 () | 1661755..1661910 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| ECRM9131_RS08890 () | 1661921..1662100 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| ECRM9131_RS08900 () | 1662343..1662762 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| ECRM9131_RS08905 () | 1662842..1663096 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| ECRM9131_RS08910 () | 1663093..1663515 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| ECRM9131_RS08915 () | 1663593..1664381 | + | 789 | WP_001304174.1 | hypothetical protein | - |
| ECRM9131_RS08920 () | 1664388..1665134 | + | 747 | WP_000788980.1 | ATP-binding protein | - |
| ECRM9131_RS08925 () | 1665157..1665918 | + | 762 | WP_000450712.1 | DUF1627 domain-containing protein | - |
| ECRM9131_RS08930 () | 1665934..1666356 | + | 423 | WP_001141110.1 | DUF977 family protein | - |
| ECRM9131_RS08935 () | 1666462..1666674 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| ECRM9131_RS08940 () | 1666707..1666924 | + | 218 | Protein_1624 | DUF4014 family protein | - |
| ECRM9131_RS08945 () | 1666926..1667189 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| ECRM9131_RS08950 () | 1667200..1667361 | + | 162 | WP_000208018.1 | hypothetical protein | - |
| ECRM9131_RS08955 () | 1667440..1667685 | + | 246 | WP_000365100.1 | hypothetical protein | - |
| ECRM9131_RS08960 () | 1668117..1669268 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| ECRM9131_RS08965 () | 1669236..1670225 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| ECRM9131_RS08970 () | 1670225..1671616 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| ECRM9131_RS08975 () | 1672116..1672715 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| ECRM9131_RS08980 () | 1672715..1673005 | + | 291 | WP_000247761.1 | DUF1364 domain-containing protein | - |
| ECRM9131_RS08985 () | 1673002..1673556 | + | 555 | WP_000640158.1 | DUF1133 family protein | - |
| ECRM9131_RS09000 () | 1674118..1674549 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| ECRM9131_RS09005 () | 1674546..1674801 | + | 256 | Protein_1635 | DUF3927 family protein | - |
| ECRM9131_RS09010 () | 1675120..1676973 | + | 1854 | WP_000143077.1 | SASA family carbohydrate esterase | - |
| ECRM9131_RS09015 () | 1677123..1677338 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| ECRM9131_RS09020 () | 1677343..1677687 | + | 345 | WP_000731221.1 | YdfR family protein | - |
| ECRM9131_RS09025 () | 1677738..1678271 | + | 534 | WP_000992086.1 | lysozyme | - |
| ECRM9131_RS09030 () | 1678545..1679084 | + | 540 | WP_001344811.1 | phage antirepressor KilAC domain-containing protein | - |
| ECRM9131_RS09040 () | 1680377..1680553 | + | 177 | WP_000285960.1 | phage antirepressor KilAC domain-containing protein | - |
| ECRM9131_RS29100 () | 1680648..1680779 | + | 132 | WP_001280923.1 | hypothetical protein | - |
| ECRM9131_RS29110 () | 1681002..1681187 | + | 186 | WP_012817877.1 | Rz1 family lipoprotein | - |
| ECRM9131_RS09060 () | 1681588..1681914 | + | 327 | WP_000828070.1 | TonB family protein | - |
| ECRM9131_RS09065 () | 1682046..1682246 | - | 201 | WP_000095744.1 | YlcI/YnfO family protein | - |
| ECRM9131_RS09070 () | 1682288..1682653 | + | 366 | WP_000829192.1 | HNH endonuclease | - |
| ECRM9131_RS09080 () | 1682942..1683505 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| ECRM9131_RS09085 () | 1683502..1685163 | + | 1662 | WP_001411753.1 | terminase large subunit | - |
| ECRM9131_RS09090 () | 1685227..1687164 | + | 1938 | WP_000173011.1 | phage major capsid protein | - |
| ECRM9131_RS09095 () | 1687209..1687430 | + | 222 | WP_001063025.1 | hypothetical protein | - |
| ECRM9131_RS09100 () | 1687376..1689798 | + | 2423 | Protein_1652 | phage portal protein | - |
| ECRM9131_RS09105 () | 1689795..1690121 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| ECRM9131_RS09110 () | 1690131..1690481 | + | 351 | WP_001007911.1 | phage head closure protein | - |
| ECRM9131_RS09115 () | 1690478..1690924 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| ECRM9131_RS09120 () | 1690921..1691265 | + | 345 | WP_000133393.1 | DUF3168 domain-containing protein | - |
| ECRM9131_RS09125 () | 1691334..1692050 | + | 717 | WP_001275480.1 | immunoglobulin domain-containing protein | - |
| ECRM9131_RS09130 () | 1692056..1692430 | + | 375 | WP_001030060.1 | phage tail assembly chaperone | - |
| ECRM9131_RS09135 () | 1692526..1692735 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| ECRM9131_RS09140 () | 1692787..1696029 | + | 3243 | WP_000212770.1 | phage tail tape measure protein | - |
| ECRM9131_RS09145 () | 1696022..1696363 | + | 342 | WP_000807964.1 | phage tail protein | - |
| ECRM9131_RS09150 () | 1696363..1697061 | + | 699 | WP_001152159.1 | phage minor tail protein L | - |
| ECRM9131_RS09155 () | 1697072..1697815 | + | 744 | WP_000194763.1 | C40 family peptidase | - |
| ECRM9131_RS09160 () | 1697761..1698393 | + | 633 | WP_064732755.1 | tail assembly protein | - |
| ECRM9131_RS09170 () | 1698584..1699111 | - | 528 | WP_000649829.1 | hypothetical protein | VF |
| ECRM9131_RS09175 () | 1699245..1702718 | + | 3474 | WP_112033817.1 | host specificity protein J | - |
| ECRM9131_RS09180 () | 1702786..1703385 | + | 600 | WP_001228290.1 | hypothetical protein | VF |
| ECRM9131_RS09185 () | 1703537..1704841 | + | 1305 | WP_000216548.1 | ISNCY family transposase KIS | Transposase |
| ECRM9131_RS09190 () | 1704843..1705112 | + | 270 | WP_001023476.1 | phage tail fiber C-terminal domain-containing protein | - |
| ECRM9131_RS09195 () | 1705225..1705625 | + | 401 | Protein_1670 | DUF1076 domain-containing protein | - |
| ECRM9131_RS09200 () | 1705605..1706204 | - | 600 | Protein_1671 | hypothetical protein ; Integrase | Integrase |
| ECRM9131_RS09205 () | 1706227..1706349 | + | 123 | WP_106409364.1 | phage tail fiber C-terminal domain-containing protein | - |
| ECRM9131_RS09210 () | 1706456..1707367 | + | 912 | WP_000950979.1 | hypothetical protein | VF |
| ECRM9131_RS09215 () | 1707433..1707872 | + | 440 | Protein_1674 | hypothetical protein | VF |
| ECRM9131_RS09230 () | 1709180..1709667 | - | 488 | Protein_1676 | IS256 family transposase ISEic2 | Transposase |
| ECRM9131_RS09235 () | 1710154..1710432 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| ECRM9131_RS09240 () | 1710860..1711006 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| ECRM9131_RS09245 () | 1711143..1711790 | - | 648 | WP_001303944.1 | hypothetical protein | VF |
| ECRM9131_RS09250 () | 1711974..1712564 | + | 591 | WP_001144879.1 | hypothetical protein | VF |
| ECRM9131_RS09255 () | 1712783..1713839 | - | 1057 | Protein_1681 | IS630 family transposase | - |
| ECRM9131_RS29410 () | 1714071..1714721 | + | 651 | WP_001345079.1 | hypothetical protein | VF |
| ECRM9131_RS09265 () | 1714892..1715127 | + | 236 | Protein_1683 | IS3 family transposase | - |
| ECRM9131_RS09270 () | 1715070..1715423 | - | 354 | WP_001261191.1 | recombinase family protein | - |
| ECRM9131_RS09275 () | 1715514..1716233 | + | 720 | WP_000171274.1 | TonB system transport protein TonB | - |
| ECRM9131_RS09280 () | 1716273..1716671 | - | 399 | WP_112033818.1 | acyl-CoA thioester hydrolase YciA | - |
| ECRM9131_RS09285 () | 1716776..1717315 | - | 540 | WP_000808667.1 | septation protein A | - |
| ECRM9131_RS09290 () | 1717345..1718088 | - | 744 | WP_000028550.1 | envelope biogenesis factor ElyC | - |
| ECRM9131_RS09295 () | 1718116..1718205 | - | 90 | Protein_1689 | YkgJ family cysteine cluster protein | - |
| ECRM9131_RS09300 () | 1718445..1719083 | + | 639 | WP_000737224.1 | outer membrane protein OmpW | - |
| ECRM9131_RS09305 () | 1719129..1720259 | - | 1131 | WP_000113674.1 | hypothetical protein ; Integrase | Integrase |
| ECRM9131_RS09310 () | 1720237..1720485 | - | 249 | WP_000113189.1 | excisionase | - |
| ECRM9131_RS09315 () | 1720550..1723021 | - | 2472 | WP_112033819.1 | exonuclease | - |
| ECRM9131_RS09320 () | 1723117..1723305 | - | 189 | WP_000199480.1 | DUF1482 family protein | - |
| ECRM9131_RS09325 () | 1723302..1723490 | - | 189 | WP_000449172.1 | cell division inhibitor | - |
| ECRM9131_RS09335 () | 1724051..1724284 | + | 234 | WP_000920491.1 | hypothetical protein | - |
| ECRM9131_RS09340 () | 1724262..1724669 | - | 408 | WP_000394552.1 | hypothetical protein | - |
| ECRM9131_RS09345 () | 1724692..1724910 | - | 219 | WP_001171894.1 | hypothetical protein | - |
| ECRM9131_RS09350 () | 1724983..1725282 | - | 300 | WP_001240336.1 | hypothetical protein | - |
| ECRM9131_RS09355 () | 1725547..1725954 | - | 408 | WP_000787428.1 | helix-turn-helix domain-containing protein | - |
| ECRM9131_RS09360 () | 1726031..1726257 | + | 227 | Protein_1701 | transcriptional regulator | - |
| ECRM9131_RS09365 () | 1726241..1726792 | + | 552 | WP_000705622.1 | hypothetical protein | - |
| ECRM9131_RS29120 () | 1726764..1727804 | + | 1041 | WP_000020556.1 | DNA-binding protein | - |
| ECRM9131_RS09370 () | 1727716..1728258 | + | 543 | WP_157825328.1 | replication protein | - |
| ECRM9131_RS09375 () | 1728292..1729026 | + | 735 | WP_000450683.1 | DUF1627 domain-containing protein | - |
| ECRM9131_RS29125 () | 1729023..1729187 | + | 165 | WP_001505071.1 | hypothetical protein | - |
| ECRM9131_RS09385 () | 1729886..1730644 | + | 759 | WP_001449026.1 | hypothetical protein | VF |
| ECRM9131_RS09395 () | 1730980..1731135 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| ECRM9131_RS09400 () | 1731356..1731613 | + | 258 | WP_001217394.1 | hypothetical protein | - |
| ECRM9131_RS09405 () | 1731683..1731961 | + | 279 | WP_032178572.1 | hypothetical protein | - |
| ECRM9131_RS09410 () | 1731963..1733018 | + | 1056 | WP_001265289.1 | DUF968 domain-containing protein | - |
| ECRM9131_RS09415 () | 1733019..1733384 | + | 366 | WP_000140002.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ECRM9131_RS09420 () | 1733381..1734070 | + | 690 | WP_001059384.1 | antiterminator | - |
| ECRM9131_RS09440 () | 1734691..1735119 | + | 429 | Protein_1714 | tellurite resistance TerB family protein | - |
| ECRM9131_RS09445 () | 1735116..1735371 | + | 256 | Protein_1715 | DUF3927 family protein | - |
| ECRM9131_RS09455 () | 1735598..1737364 | + | 1767 | Protein_1716 | DUF1737 domain-containing protein | - |
| ECRM9131_RS09460 () | 1737419..1738632 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| ECRM9131_RS09470 () | 1738722..1738991 | + | 270 | WP_001023452.1 | phage tail fiber C-terminal domain-containing protein | - |
| ECRM9131_RS09475 () | 1739132..1740007 | + | 876 | WP_000491542.1 | hypothetical protein | VF |
| ECRM9131_RS29130 () | 1740232..1740882 | - | 651 | WP_001121225.1 | hypothetical protein | VF |
| ECRM9131_RS09490 () | 1740886..1741152 | - | 267 | Protein_1721 | hypothetical protein | - |
| ECRM9131_RS29415 () | 1741210..1741359 | - | 150 | WP_001345374.1 | hypothetical protein | - |
| ECRM9131_RS09495 () | 1741478..1741720 | - | 243 | WP_012817881.1 | DinI-like family protein | - |
| ECRM9131_RS09500 () | 1741852..1743135 | + | 1284 | Protein_1724 | MHS family MFS transporter YdfJ | - |
| ECRM9131_RS09505 () | 1743224..1744684 | + | 1461 | WP_000527750.1 | mannitol dehydrogenase family protein | - |
| ECRM9131_RS09510 () | 1744720..1744923 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| ECRM9131_RS09515 () | 1745101..1745787 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| ECRM9131_RS09520 () | 1745876..1746622 | - | 747 | WP_000636571.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| ECRM9131_RS09530 () | 1746759..1748804 | + | 2046 | WP_001341522.1 | peptidyl-dipeptidase Dcp | - |
| ECRM9131_RS09540 () | 1748849..1749367 | - | 519 | WP_001024559.1 | 2-oxo-tetronate isomerase | - |
| ECRM9131_RS09545 () | 1749643..1750035 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| ECRM9131_RS09550 () | 1750290..1751180 | + | 891 | WP_000592835.1 | diguanylate cyclase DgcZ | - |
| ECRM9131_RS29620 () | 1751295..1751399 | - | 105 | WP_211180496.1 | protein MgtT | - |
| ECRM9131_RS09555 () | 1751399..1751494 | - | 96 | WP_000901367.1 | protein MgtS | - |
| ECRM9131_RS09560 () | 1751621..1752808 | - | 1188 | WP_001054201.1 | efflux MFS transporter YdeE | - |
| ECRM9131_RS09565 () | 1753003..1753902 | + | 900 | WP_000087216.1 | O-acetylserine/cysteine exporter | - |
| ECRM9131_RS09570 () | 1753947..1754645 | - | 699 | WP_000577179.1 | GntR family transcriptional regulator | - |
| ECRM9131_RS09575 () | 1754844..1755155 | + | 312 | WP_000722571.1 | PTS sugar transporter subunit IIB | - |
| ECRM9131_RS09580 () | 1755270..1756592 | + | 1323 | WP_000523802.1 | PTS sugar transporter subunit IIC | - |
| ECRM9131_RS09585 () | 1756620..1756931 | + | 312 | WP_001296721.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| ECRM9131_RS09590 () | 1756987..1758660 | + | 1674 | WP_001022772.1 | carbohydrate porin | - |
| ECRM9131_RS09595 () | 1758685..1760124 | + | 1440 | WP_000012625.1 | 6-phospho-beta-glucosidase | - |
| ECRM9131_RS09600 () | 1760181..1760399 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| ECRM9131_RS09605 () | 1760431..1760814 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| ECRM9131_RS09610 () | 1760834..1761268 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|