MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 55147 bp
Accession: NZ_CP028414 Location: 638459..693605 Organism: Streptococcus mitis NCTC 12261 Replicon: chromosome
Accession: NZ_CP028414 Location: 638459..693605 Organism: Streptococcus mitis NCTC 12261 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM12261_RS03440 () | 634935..636098 | + | 1164 | WP_001079971.1 | class I SAM-dependent rRNA methyltransferase | - |
| SM12261_RS03445 () | 636095..636772 | + | 678 | WP_000767784.1 | type I 3-dehydroquinate dehydratase | - |
| SM12261_RS03450 () | 636762..637616 | + | 855 | WP_000762510.1 | shikimate dehydrogenase | - |
| SM12261_RS03455 () | 637635..638702 | + | 1068 | WP_000702141.1 | 3-dehydroquinate synthase | - |
| SM12261_RS03460 () | 638712..639878 | + | 1167 | WP_001269850.1 | chorismate synthase | - |
| SM12261_RS03465 () | 639888..640991 | + | 1104 | WP_001140859.1 | prephenate dehydrogenase | - |
| SM12261_RS03470 () | 641002..641340 | + | 339 | WP_000065969.1 | YlbF/YmcA family competence regulator | - |
| SM12261_RS03475 () | 641432..642715 | + | 1284 | WP_004238699.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| SM12261_RS03480 () | 642708..643184 | + | 477 | WP_001151349.1 | shikimate kinase | - |
| SM12261_RS03485 () | 643181..644029 | + | 849 | WP_000686445.1 | prephenate dehydratase | - |
| SM12261_RS03490 () | 644026..645336 | + | 1311 | WP_000032338.1 | LCP family protein | - |
| SM12261_RS03495 () | 645457..646302 | + | 846 | WP_001061995.1 | phosphorylcholine transferase LicD | - |
| SM12261_RS03500 () | 646292..647395 | + | 1104 | WP_000225887.1 | glycosyltransferase | - |
| SM12261_RS03505 () | 647397..648383 | + | 987 | WP_000446965.1 | putative glycosyltransferase EpsJ | VF |
| SM12261_RS03510 () | 648399..649868 | + | 1470 | WP_004238693.1 | O-antigen polysaccharide polymerase Wzy family protein | - |
| SM12261_RS03515 () | 649861..650895 | + | 1035 | WP_000461491.1 | hypothetical protein | - |
| SM12261_RS03520 () | 651102..651839 | + | 738 | WP_000782682.1 | adaptor protein MecA | - |
| SM12261_RS03525 () | 651991..653277 | + | 1287 | WP_000216346.1 | homoserine dehydrogenase | - |
| SM12261_RS03530 () | 653279..654148 | + | 870 | WP_000692425.1 | homoserine kinase | - |
| SM12261_RS03535 () | 654361..655299 | + | 939 | WP_000818182.1 | Peptide methionine sulfoxide reductase MsrA/MsrB 1 | VF |
| SM12261_RS03540 () | 655360..657084 | + | 1725 | WP_000681728.1 | ABC transporter ATP-binding protein/permease | - |
| SM12261_RS03545 () | 657086..658834 | + | 1749 | WP_001254284.1 | putative ABC transporter ATP-binding protein | VF |
| SM12261_RS03550 () | 659092..660351 | + | 1260 | WP_000870440.1 | TRZ/ATZ family protein | - |
| SM12261_RS03560 () | 660602..661102 | + | 501 | WP_001287267.1 | 50S ribosomal protein L10 | - |
| SM12261_RS03565 () | 661175..661543 | + | 369 | WP_001196965.1 | 50S ribosomal protein L7/L12 | - |
| SM12261_RS03570 () | 662071..662547 | + | 477 | WP_000579609.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SM12261_RS03575 () | 662547..663317 | + | 771 | WP_000405376.1 | zeta toxin family protein | Toxin Detail |
| SM12261_RS03585 () | 664974..665405 | + | 432 | WP_025169729.1 | hypothetical protein | - |
| SM12261_RS03590 () | 665408..665857 | + | 450 | WP_000370556.1 | hypothetical protein | - |
| SM12261_RS03595 () | 665960..666430 | + | 471 | WP_000447038.1 | winged helix DNA-binding protein | - |
| SM12261_RS03600 () | 666430..668706 | + | 2277 | WP_000401876.1 | UvrABC system protein A | VF |
| SM12261_RS03605 () | 669158..669490 | + | 333 | WP_000656278.1 | LytTR family transcriptional regulator DNA-binding domain-containing protein | - |
| SM12261_RS03610 () | 669501..670241 | + | 741 | WP_001019941.1 | response regulator transcription factor | - |
| SM12261_RS03615 () | 670470..671615 | + | 1146 | WP_000209246.1 | low temperature requirement protein A | - |
| SM12261_RS03620 () | 671912..671980 | + | 69 | Protein_616 | conjugal transfer protein | - |
| SM12261_RS03625 () | 672305..672988 | + | 684 | WP_000492701.1 | helix-turn-helix domain-containing protein | - |
| SM12261_RS03630 () | 672991..674406 | + | 1416 | WP_000219659.1 | Y-family DNA polymerase | - |
| SM12261_RS03635 () | 674403..674768 | + | 366 | WP_000981959.1 | hypothetical protein | - |
| SM12261_RS03640 () | 674758..675048 | + | 291 | WP_001080187.1 | hypothetical protein | - |
| SM12261_RS03645 () | 675343..675702 | + | 360 | WP_000529547.1 | hypothetical protein | - |
| SM12261_RS03650 () | 675712..676077 | + | 366 | WP_000263039.1 | MobC family plasmid mobilization relaxosome protein | - |
| SM12261_RS03655 () | 676064..677926 | + | 1863 | WP_000261797.1 | relaxase/mobilization nuclease domain-containing protein | - |
| SM12261_RS03660 () | 677970..678818 | - | 849 | WP_000837479.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| SM12261_RS03665 () | 679102..679320 | + | 219 | Protein_625 | ATP-binding cassette domain-containing protein | - |
| SM12261_RS03670 () | 679379..679813 | + | 435 | WP_135781820.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| SM12261_RS09480 () | 679826..679996 | + | 171 | WP_000711945.1 | hypothetical protein | - |
| SM12261_RS03680 () | 680277..681623 | - | 1347 | WP_000199543.1 | NADP-specific glutamate dehydrogenase | - |
| SM12261_RS03685 () | 681864..682799 | + | 936 | WP_000255154.1 | dihydroorotate oxidase | - |
| SM12261_RS03690 () | 682833..683870 | + | 1038 | WP_135781821.1 | DNA polymerase III subunit delta | - |
| SM12261_RS03700 () | 684241..684846 | + | 606 | WP_000974733.1 | Superoxide dismutase [Mn] | VF |
| SM12261_RS03705 () | 685008..685538 | + | 531 | WP_001224347.1 | YutD family protein | - |
| SM12261_RS03710 () | 685559..686644 | + | 1086 | WP_000804766.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| SM12261_RS03715 () | 686644..687126 | + | 483 | WP_000976729.1 | VanZ family protein | - |
| SM12261_RS03720 () | 687128..688669 | + | 1542 | WP_000025380.1 | ATP-binding cassette domain-containing protein | - |
| SM12261_RS03725 () | 688723..689526 | - | 804 | WP_000717398.1 | Putative peptidyl-prolyl cis-trans isomerase | VF |
| SM12261_RS03730 () | 689831..690055 | - | 225 | WP_001041099.1 | Antitoxin HipB | VF |
| SM12261_RS03735 () | 690058..690636 | - | 579 | WP_000742118.1 | hypothetical protein | - |
| SM12261_RS09485 () | 690897..691040 | - | 144 | WP_001067872.1 | hypothetical protein | - |
| SM12261_RS03740 () | 691216..691488 | + | 273 | WP_000268760.1 | 30S ribosomal protein S16 | - |
| SM12261_RS03745 () | 691508..691747 | + | 240 | WP_000379617.1 | KH domain-containing protein | - |
| SM12261_RS03750 () | 691861..692412 | + | 552 | WP_004239319.1 | hypothetical protein | - |
| SM12261_RS03755 () | 692520..693308 | + | 789 | WP_000821028.1 | alpha/beta hydrolase | - |
| SM12261_RS03760 () | 693339..693857 | + | 519 | WP_001105912.1 | ribosome maturation factor RimM | - |
| SM12261_RS03765 () | 693847..694566 | + | 720 | WP_000686917.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| SM12261_RS03770 () | 694578..694916 | + | 339 | WP_001196038.1 | hypothetical protein | - |
| SM12261_RS03775 () | 694947..695267 | - | 321 | WP_001216102.1 | hypothetical protein | - |
| SM12261_RS03780 () | 695366..695581 | + | 216 | WP_000807437.1 | YdbC family protein | - |
| SM12261_RS03785 () | 695635..696171 | - | 537 | WP_000709046.1 | biotin transporter BioY | - |
| SM12261_RS03790 () | 696360..697705 | - | 1346 | Protein_650 | glutathione-disulfide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|