MGE detailed information
MGE type: Conjugative plasmid MGE length: 67750 bp
Accession: NZ_CP028383 Location: 1..67750 Organism: Escherichia coli strain RM10466 Replicon: plasmid pRM10466-2
Accession: NZ_CP028383 Location: 1..67750 Organism: Escherichia coli strain RM10466 Replicon: plasmid pRM10466-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7R96_RS27430 () | 852..3674 | + | 2823 | WP_062855967.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C7R96_RS27435 () | 3690..4187 | + | 498 | WP_053293981.1 | entry exclusion protein | - |
| C7R96_RS27440 () | 4219..4950 | + | 732 | WP_033800894.1 | complement resistance protein TraT | - |
| C7R96_RS27445 () | 5154..5633 | + | 480 | WP_001473214.1 | hypothetical protein | - |
| C7R96_RS27450 () | 5915..8104 | + | 2190 | WP_096844695.1 | type IV conjugative transfer system coupling protein TraD | - |
| C7R96_RS27455 () | 8104..13374 | + | 5271 | WP_096936663.1 | Multifunctional conjugation protein TraI | Relaxase |
| C7R96_RS27460 () | 13393..14139 | + | 747 | WP_052921641.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| C7R96_RS27465 () | 14222..14590 | + | 369 | WP_000722532.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| C7R96_RS27470 () | 14626..15183 | + | 558 | WP_000139380.1 | fertility inhibition protein FinO | - |
| C7R96_RS27475 () | 15338..15541 | + | 204 | WP_001336517.1 | hypothetical protein | - |
| C7R96_RS27480 () | 16286..16747 | + | 462 | WP_000760088.1 | thermonuclease family protein | - |
| C7R96_RS27485 () | 16850..17233 | + | 384 | WP_001109063.1 | hypothetical protein | - |
| - () | 17408..17464 | - | 57 | NuclAT_1 | - | - |
| - () | 17408..17464 | - | 57 | NuclAT_1 | - | - |
| - () | 17408..17464 | - | 57 | NuclAT_1 | - | - |
| - () | 17408..17464 | - | 57 | NuclAT_1 | - | - |
| C7R96_RS27495 () | 17456..17662 | + | 207 | WP_001362723.1 | type I toxin-antitoxin system Hok family toxin | - |
| C7R96_RS27500 () | 17946..18194 | + | 249 | WP_000083838.1 | replication regulatory protein RepA | - |
| C7R96_RS27510 () | 18441..18515 | + | 75 | WP_001365571.1 | RepA leader peptide Tap | - |
| C7R96_RS27515 () | 18508..19365 | + | 858 | WP_000130991.1 | incFII family plasmid replication initiator RepA | - |
| C7R96_RS27525 () | 20278..20547 | + | 270 | WP_000079942.1 | hypothetical protein | Antitoxin Detail |
| C7R96_RS27530 () | 20544..20825 | + | 282 | WP_000970004.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C7R96_RS28265 () | 21262..21498 | + | 237 | WP_032257624.1 | colicin V immunity protein | - |
| C7R96_RS27540 () | 21476..21787 | + | 312 | WP_001259758.1 | colicin V | - |
| C7R96_RS27545 () | 21957..24071 | - | 2115 | WP_109996808.1 | peptidase domain-containing ABC transporter | - |
| C7R96_RS27550 () | 24046..25320 | - | 1275 | WP_021573925.1 | HlyD family secretion protein | - |
| C7R96_RS27555 () | 25954..26596 | + | 643 | Protein_23 | CPBP family intramembrane metalloprotease | - |
| C7R96_RS28270 () | 26689..26946 | + | 258 | WP_033560241.1 | type II toxin-antitoxin system antitoxin PemI | - |
| C7R96_RS27560 () | 26879..27280 | + | 402 | WP_148722836.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| C7R96_RS27565 () | 27396..27791 | - | 396 | WP_000445939.1 | plasmid partitioning/stability family protein | - |
| C7R96_RS27570 () | 27791..28750 | - | 960 | WP_000921957.1 | plasmid segregation protein ParM | - |
| C7R96_RS27580 () | 29189..30091 | + | 903 | WP_077629773.1 | DUF1281 domain-containing protein | - |
| C7R96_RS27585 () | 30088..30400 | + | 313 | Protein_29 | hypothetical protein | - |
| C7R96_RS27590 () | 30476..31159 | + | 684 | WP_087672695.1 | DNA methylase | - |
| C7R96_RS27595 () | 31160..31381 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| C7R96_RS27600 () | 31395..31829 | + | 435 | WP_087672694.1 | DUF1380 family protein | - |
| C7R96_RS28275 () | 31874..32644 | + | 771 | WP_087672693.1 | hypothetical protein | - |
| C7R96_RS27615 () | 33182..33484 | + | 303 | WP_001364029.1 | antirestriction protein | - |
| C7R96_RS27620 () | 33531..33950 | + | 420 | WP_087672692.1 | DUF1380 family protein | - |
| C7R96_RS27625 () | 33950..34141 | + | 192 | WP_001027048.1 | hypothetical protein | - |
| C7R96_RS28425 () | 34120..34431 | - | 312 | WP_175400449.1 | pilus assembly protein | - |
| C7R96_RS27640 () | 35109..35339 | + | 231 | WP_047083525.1 | hypothetical protein | - |
| C7R96_RS27645 () | 35391..36752 | + | 1362 | WP_087672685.1 | DUF3560 domain-containing protein | - |
| C7R96_RS27650 () | 36799..37362 | + | 564 | WP_032305464.1 | class I SAM-dependent methyltransferase | - |
| C7R96_RS28430 () | 37448..37853 | - | 406 | Protein_41 | hypothetical protein | - |
| C7R96_RS27675 () | 38172..38693 | + | 522 | WP_000290783.1 | single-stranded DNA-binding protein | - |
| C7R96_RS27685 () | 38751..38984 | + | 234 | WP_069192978.1 | DUF905 domain-containing protein | - |
| C7R96_RS27690 () | 39045..41009 | + | 1965 | WP_087672663.1 | ParB/RepB/Spo0J family partition protein | - |
| C7R96_RS27695 () | 41078..41512 | + | 435 | WP_000845923.1 | conjugation system SOS inhibitor PsiB | - |
| C7R96_RS27700 () | 41509..42228 | + | 720 | WP_001276237.1 | plasmid SOS inhibition protein A | - |
| C7R96_RS27705 () | 42225..42539 | + | 315 | WP_000872084.1 | hypothetical protein | - |
| - () | 42488..42682 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 42488..42682 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 42488..42682 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 42488..42682 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 42491..42682 | - | 192 | - | - | Antitoxin Detail |
| C7R96_RS27710 () | 42747..42908 | + | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C7R96_RS28435 () | 43209..43506 | - | 298 | Protein_49 | hypothetical protein | - |
| C7R96_RS27730 () | 43803..44105 | + | 303 | WP_001272235.1 | hypothetical protein | - |
| C7R96_RS27740 () | 44261..44548 | + | 288 | WP_000107543.1 | hypothetical protein | - |
| C7R96_RS27745 () | 44667..45488 | + | 822 | WP_032107531.1 | DUF945 domain-containing protein | - |
| C7R96_RS27750 () | 45785..46387 | - | 603 | WP_077785958.1 | hypothetical protein | VF |
| C7R96_RS27755 () | 46727..47110 | + | 384 | WP_032210979.1 | relaxosome protein TraM | - |
| C7R96_RS27760 () | 47295..47984 | + | 690 | WP_032305016.1 | conjugal transfer transcriptional regulator TraJ | - |
| C7R96_RS27765 () | 48083..48457 | + | 375 | WP_032305023.1 | conjugal transfer relaxosome protein TraY | - |
| C7R96_RS27770 () | 48513..48866 | + | 354 | WP_021521309.1 | type IV conjugative transfer system pilin TraA | - |
| C7R96_RS27775 () | 48881..49192 | + | 312 | WP_000012099.1 | type IV conjugative transfer system protein TraL | - |
| C7R96_RS27780 () | 49214..49780 | + | 567 | WP_062855974.1 | type IV conjugative transfer system protein TraE | - |
| C7R96_RS27785 () | 49767..50495 | + | 729 | WP_001365587.1 | type-F conjugative transfer system secretin TraK | - |
| C7R96_RS27790 () | 50495..51925 | + | 1431 | WP_000146622.1 | conjugal transfer protein TraB | - |
| C7R96_RS27795 () | 51915..52502 | + | 588 | WP_062855973.1 | conjugal transfer protein TraP | - |
| C7R96_RS27800 () | 52456..52809 | + | 354 | WP_109996810.1 | conjugal transfer protein TrbD | - |
| C7R96_RS27805 () | 52802..53053 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| C7R96_RS27810 () | 53050..53565 | + | 516 | WP_028985436.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C7R96_RS27815 () | 53700..53921 | + | 222 | WP_001278977.1 | conjugal transfer protein TraR | - |
| C7R96_RS27820 () | 53914..54309 | + | 396 | WP_000549593.1 | hypothetical protein | - |
| C7R96_RS27825 () | 54320..54793 | + | 474 | WP_000549599.1 | hypothetical protein | - |
| C7R96_RS28285 () | 55276..55623 | + | 348 | WP_021573904.1 | hypothetical protein | - |
| C7R96_RS27845 () | 55748..58378 | + | 2631 | WP_062855971.1 | type IV secretion system protein TraC | - |
| C7R96_RS27850 () | 58375..58761 | + | 387 | WP_000214090.1 | type-F conjugative transfer system protein TrbI | - |
| C7R96_RS27855 () | 58758..59390 | + | 633 | WP_001203739.1 | type-F conjugative transfer system protein TraW | - |
| C7R96_RS27860 () | 59387..60379 | + | 993 | WP_000817328.1 | conjugal transfer pilus assembly protein TraU | - |
| C7R96_RS27865 () | 60400..60579 | + | 180 | WP_096936660.1 | hypothetical protein | - |
| C7R96_RS27870 () | 60576..60815 | - | 240 | WP_001066128.1 | hypothetical protein | - |
| C7R96_RS27875 () | 61008..61646 | + | 639 | WP_032305012.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C7R96_RS27880 () | 61643..62023 | + | 381 | WP_032206670.1 | hypothetical protein | - |
| C7R96_RS27885 () | 62183..64021 | + | 1839 | WP_109996811.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C7R96_RS27890 () | 64035..64292 | + | 258 | WP_032305011.1 | conjugal transfer protein TrbE | - |
| C7R96_RS27895 () | 64285..65028 | + | 744 | WP_137052468.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C7R96_RS27900 () | 65042..65383 | + | 342 | WP_000556797.1 | conjugal transfer protein TrbA | - |
| C7R96_RS27910 () | 65779..66069 | + | 291 | WP_021521297.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C7R96_RS27915 () | 66056..66601 | + | 546 | WP_109996812.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C7R96_RS27920 () | 66531..66872 | + | 342 | WP_096936662.1 | P-type conjugative transfer protein TrbJ | - |
| C7R96_RS27925 () | 66820..67245 | + | 426 | WP_071999353.1 | F-type conjugal transfer protein TrbF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|