MGE detailed information
MGE type: Prophage MGE length: 66365 bp
Accession: NZ_CP028379 Location: 1723553..1789917 Organism: Escherichia coli O145 str. RM9872 Replicon: chromosome
Accession: NZ_CP028379 Location: 1723553..1789917 Organism: Escherichia coli O145 str. RM9872 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3Y_RS28775 () | 1719541..1719588 | + | 48 | WP_211180494.1 | protein YnaN | - |
| I3Y_RS08820 () | 1719602..1720585 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| I3Y_RS08830 () | 1721063..1722436 | + | 1374 | WP_000123735.1 | ATP-dependent RNA helicase DbpA | - |
| I3Y_RS08835 () | 1722565..1723500 | - | 936 | WP_001157377.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| I3Y_RS08840 () | 1723553..1724788 | - | 1236 | WP_000040838.1 | Protein SufA ; Integrase | Integrase |
| I3Y_RS08845 () | 1724790..1725005 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| I3Y_RS08850 () | 1725105..1725293 | - | 189 | WP_001298826.1 | DUF1187 family protein | - |
| - () | 1725109..1725287 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1725109..1725287 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1725109..1725287 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1725109..1725287 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| I3Y_RS08855 () | 1725286..1725480 | - | 195 | WP_021500490.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| I3Y_RS08860 () | 1725544..1726596 | - | 1053 | WP_001004423.1 | recombinase RecT | - |
| I3Y_RS08865 () | 1726608..1729733 | - | 3126 | WP_000102216.1 | exodeoxyribonuclease VIII | - |
| I3Y_RS08870 () | 1729835..1730110 | - | 276 | WP_001519830.1 | phage protein | - |
| I3Y_RS08875 () | 1730185..1730361 | - | 177 | WP_000245528.1 | hypothetical protein | - |
| I3Y_RS08880 () | 1730355..1730576 | - | 222 | WP_000560227.1 | cell division protein FtsZ | - |
| I3Y_RS08890 () | 1731146..1731355 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| I3Y_RS08895 () | 1731356..1731994 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| I3Y_RS08900 () | 1732006..1732158 | - | 153 | WP_000379546.1 | DUF1391 family protein | - |
| I3Y_RS08905 () | 1732464..1732883 | - | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| I3Y_RS08910 () | 1732980..1733222 | + | 243 | WP_001033914.1 | helix-turn-helix domain-containing protein | - |
| I3Y_RS08915 () | 1733219..1733641 | + | 423 | WP_000702023.1 | hypothetical protein | - |
| I3Y_RS08920 () | 1733654..1734523 | + | 870 | WP_000899742.1 | DUF1376 domain-containing protein | - |
| I3Y_RS08925 () | 1734530..1735276 | + | 747 | WP_000788990.1 | ATP-binding protein | - |
| I3Y_RS08930 () | 1735298..1736068 | + | 771 | WP_032313847.1 | DUF1627 domain-containing protein | - |
| I3Y_RS08935 () | 1736084..1736479 | + | 396 | WP_001118155.1 | DUF977 family protein | - |
| I3Y_RS08940 () | 1736537..1736893 | + | 357 | WP_000403779.1 | hypothetical protein | - |
| I3Y_RS08955 () | 1738531..1738875 | + | 345 | WP_029594466.1 | hypothetical protein | - |
| I3Y_RS08960 () | 1738872..1739225 | + | 354 | WP_000610382.1 | DUF551 domain-containing protein | - |
| I3Y_RS08965 () | 1739341..1739445 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| I3Y_RS08975 () | 1739691..1739846 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| I3Y_RS08990 () | 1740406..1741005 | + | 600 | WP_000940348.1 | DUF1367 family protein | - |
| I3Y_RS08995 () | 1741005..1741295 | + | 291 | WP_000228019.1 | DUF1364 domain-containing protein | - |
| I3Y_RS09000 () | 1741292..1741846 | + | 555 | WP_000640148.1 | DUF1133 family protein | - |
| I3Y_RS09005 () | 1742120..1742701 | + | 582 | WP_000211416.1 | ORF6N domain-containing protein | - |
| I3Y_RS28300 () | 1742945..1743142 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| I3Y_RS28630 () | 1744647..1745303 | + | 657 | Protein_1674 | helix-turn-helix domain-containing protein | - |
| I3Y_RS09040 () | 1745753..1746184 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| I3Y_RS09045 () | 1746181..1746436 | + | 256 | Protein_1676 | DUF3927 family protein | - |
| I3Y_RS09050 () | 1746756..1748606 | + | 1851 | WP_025380333.1 | SASA family carbohydrate esterase | - |
| I3Y_RS09060 () | 1749043..1749258 | + | 216 | WP_024165672.1 | class II holin family protein | - |
| I3Y_RS09065 () | 1749263..1749607 | + | 345 | WP_000731192.1 | YdfR family protein | - |
| I3Y_RS09070 () | 1749658..1750059 | + | 402 | Protein_1680 | lysozyme | - |
| I3Y_RS09075 () | 1750113..1751326 | + | 1214 | WP_136952279.1 | IS3 family transposase IS629 | Transposase |
| I3Y_RS09080 () | 1751367..1751504 | + | 138 | Protein_1682 | lysozyme | - |
| I3Y_RS09085 () | 1751775..1752344 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| I3Y_RS28305 () | 1752344..1752490 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| I3Y_RS28310 () | 1752713..1752898 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| I3Y_RS09100 () | 1753424..1753738 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| I3Y_RS09105 () | 1753820..1754044 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| I3Y_RS09110 () | 1754433..1754978 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| I3Y_RS09115 () | 1754953..1756878 | + | 1926 | WP_096850022.1 | phage terminase large subunit family protein | - |
| I3Y_RS09120 () | 1756875..1757081 | + | 207 | WP_000198149.1 | gpW family protein | - |
| I3Y_RS09125 () | 1757078..1758679 | + | 1602 | WP_001358553.1 | phage portal protein | - |
| I3Y_RS09130 () | 1758660..1759979 | + | 1320 | WP_000123248.1 | S49 family peptidase | - |
| I3Y_RS09135 () | 1759989..1760321 | + | 333 | WP_001358225.1 | head decoration protein | - |
| I3Y_RS09140 () | 1760377..1761402 | + | 1026 | WP_000063244.1 | major capsid protein | - |
| I3Y_RS09145 () | 1761444..1761839 | + | 396 | WP_000158866.1 | DNA-packaging protein FI | - |
| I3Y_RS09150 () | 1761851..1762204 | + | 354 | WP_000785282.1 | head-tail joining protein | - |
| I3Y_RS09155 () | 1762216..1762794 | + | 579 | WP_000975081.1 | phage tail protein | - |
| I3Y_RS09160 () | 1762791..1763186 | + | 396 | WP_032315346.1 | phage minor tail U family protein | - |
| I3Y_RS09165 () | 1763194..1763946 | + | 753 | WP_000235067.1 | Ig domain-containing protein | - |
| I3Y_RS09170 () | 1763960..1764382 | + | 423 | WP_000479051.1 | phage minor tail protein G | - |
| I3Y_RS09175 () | 1764409..1764822 | + | 414 | WP_000533442.1 | phage tail assembly protein T | - |
| I3Y_RS09180 () | 1764803..1767415 | + | 2613 | WP_000081788.1 | phage tail tape measure protein | - |
| I3Y_RS09185 () | 1767412..1767741 | + | 330 | WP_000847298.1 | phage tail protein | - |
| I3Y_RS09190 () | 1767741..1768439 | + | 699 | WP_106873527.1 | phage minor tail protein L | - |
| I3Y_RS09195 () | 1768445..1769188 | + | 744 | WP_061330346.1 | C40 family peptidase | - |
| I3Y_RS09200 () | 1769134..1769766 | + | 633 | WP_064757830.1 | tail assembly protein | - |
| I3Y_RS09205 () | 1770012..1773488 | + | 3477 | WP_119651817.1 | host specificity protein J | - |
| I3Y_RS09210 () | 1773555..1774154 | + | 600 | WP_106873525.1 | Virulence sensor histidine kinase PhoQ | VF |
| I3Y_RS09215 () | 1774219..1775532 | + | 1314 | WP_119651818.1 | ISNCY family transposase KIS | Transposase |
| I3Y_RS09220 () | 1775534..1775803 | + | 270 | WP_001101711.1 | phage tail fiber C-terminal domain-containing protein | - |
| I3Y_RS09230 () | 1776206..1777219 | + | 1014 | WP_122993102.1 | Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsC | VF |
| I3Y_RS09240 () | 1777590..1777844 | - | 255 | WP_119651819.1 | DinI-like family protein | - |
| I3Y_RS09245 () | 1777846..1779059 | + | 1214 | WP_136952279.1 | IS3 family transposase IS629 | Transposase |
| I3Y_RS09250 () | 1779104..1779217 | - | 114 | Protein_1714 | DinI family protein | - |
| I3Y_RS09255 () | 1779277..1779567 | + | 291 | Protein_1715 | MFS transporter | - |
| I3Y_RS09265 () | 1780887..1781873 | + | 987 | Protein_1717 | MHS family MFS transporter YdfJ | - |
| I3Y_RS09270 () | 1781963..1783423 | + | 1461 | WP_000527802.1 | mannitol dehydrogenase family protein | - |
| I3Y_RS09275 () | 1783459..1783662 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| I3Y_RS09280 () | 1783839..1784525 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| I3Y_RS09285 () | 1784614..1785360 | - | 747 | WP_000636575.1 | Purine nucleoside phosphoramidase | VF |
| I3Y_RS09295 () | 1785497..1787542 | + | 2046 | WP_001401055.1 | peptidyl-dipeptidase Dcp | - |
| I3Y_RS09300 () | 1787587..1788105 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| I3Y_RS09305 () | 1788381..1788772 | + | 392 | Protein_1724 | YdeI family stress tolerance OB fold protein | - |
| I3Y_RS09310 () | 1789027..1789917 | + | 891 | WP_000592812.1 | diguanylate cyclase DgcZ | - |
| I3Y_RS28780 () | 1790032..1790136 | - | 105 | WP_211180496.1 | protein MgtT | - |
| I3Y_RS09315 () | 1790136..1790231 | - | 96 | WP_000901367.1 | protein MgtS | - |
| I3Y_RS09320 () | 1790358..1791545 | - | 1188 | WP_001054153.1 | efflux MFS transporter YdeE | - |
| I3Y_RS09325 () | 1791740..1792639 | + | 900 | WP_000087230.1 | O-acetylserine/cysteine exporter | - |
| I3Y_RS09330 () | 1792670..1792888 | - | 219 | WP_000803520.1 | multiple antibiotic resistance protein MarB | - |
| I3Y_RS09335 () | 1792920..1793303 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| I3Y_RS09340 () | 1793324..1793758 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| I3Y_RS09345 () | 1793970..1794635 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|