MGE detailed information
MGE type: Genomic_island MGE length: 28243 bp
Accession: NZ_CP028349 Location: 3618869..3647111 Organism: Pantoea vagans strain PV989 Replicon: chromosome
Accession: NZ_CP028349 Location: 3618869..3647111 Organism: Pantoea vagans strain PV989 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9381_RS16970 () | 3614679..3615026 | + | 348 | WP_013358772.1 | outer membrane protein assembly factor BamE | - |
| C9381_RS16975 () | 3615118..3615411 | - | 294 | WP_013358773.1 | RnfH family protein | - |
| C9381_RS16980 () | 3615404..3615838 | - | 435 | WP_013358774.1 | type II toxin-antitoxin system RatA family toxin | - |
| C9381_RS16985 () | 3615997..3616479 | + | 483 | WP_010257694.1 | SsrA-binding protein SmpB | - |
| C9381_RS16995 () | 3617089..3618336 | + | 1248 | WP_107320029.1 | integrase | - |
| C9381_RS17000 () | 3618869..3619570 | - | 702 | WP_107320030.1 | inovirus Gp2 family protein | - |
| C9381_RS17005 () | 3619889..3621385 | - | 1497 | WP_107320031.1 | DUF3987 domain-containing protein | - |
| C9381_RS17010 () | 3621401..3621637 | - | 237 | WP_107320032.1 | AlpA family phage regulatory protein | - |
| C9381_RS17015 () | 3621737..3623494 | + | 1758 | WP_159053834.1 | hypothetical protein | - |
| C9381_RS17020 () | 3623666..3627514 | - | 3849 | WP_107320034.1 | hypothetical protein | - |
| C9381_RS17025 () | 3627554..3628525 | - | 972 | WP_107320035.1 | reverse transcriptase family protein | - |
| C9381_RS17030 () | 3628506..3628796 | - | 291 | WP_107320036.1 | helix-turn-helix transcriptional regulator | - |
| C9381_RS17035 () | 3628848..3629087 | - | 240 | WP_039277793.1 | hypothetical protein | - |
| C9381_RS17040 () | 3629826..3630911 | - | 1086 | WP_107320037.1 | hypothetical protein | - |
| C9381_RS17045 () | 3630917..3632701 | - | 1785 | WP_107320038.1 | restriction system-associated AAA family ATPase | - |
| C9381_RS17050 () | 3632698..3634278 | - | 1581 | WP_107320039.1 | restriction endonuclease subunit S | - |
| C9381_RS17055 () | 3634275..3635939 | - | 1665 | WP_107320040.1 | type I restriction-modification system subunit M | - |
| C9381_RS17060 () | 3635954..3638752 | - | 2799 | WP_107320041.1 | DEAD/DEAH box helicase family protein | - |
| C9381_RS17065 () | 3639320..3640189 | + | 870 | WP_107320042.1 | GTPase family protein | - |
| C9381_RS17070 () | 3640450..3641145 | + | 696 | WP_107320043.1 | transcriptional regulator | - |
| C9381_RS17075 () | 3641166..3641639 | + | 474 | WP_107320044.1 | hypothetical protein | - |
| C9381_RS17080 () | 3641664..3642122 | + | 459 | WP_107320045.1 | hypothetical protein | - |
| C9381_RS17085 () | 3642220..3642639 | + | 420 | WP_107320046.1 | antirestriction protein | - |
| C9381_RS17090 () | 3642654..3643121 | + | 468 | WP_107320047.1 | DNA repair protein RadC | - |
| C9381_RS17095 () | 3643132..3643458 | + | 327 | WP_107320048.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C9381_RS17100 () | 3643490..3643870 | + | 381 | WP_107320049.1 | TA system toxin CbtA family protein | Toxin Detail |
| C9381_RS17105 () | 3643867..3644076 | + | 210 | WP_107320050.1 | hypothetical protein | - |
| C9381_RS17110 () | 3644611..3645332 | + | 722 | Protein_3305 | hypothetical protein | - |
| C9381_RS17115 () | 3645335..3645808 | + | 474 | WP_107320051.1 | hypothetical protein | - |
| C9381_RS17120 () | 3646290..3647111 | + | 822 | WP_107320052.1 | hypothetical protein | - |
| C9381_RS17125 () | 3647119..3647415 | + | 297 | WP_095706782.1 | hypothetical protein | - |
| C9381_RS17135 () | 3647869..3649143 | + | 1275 | WP_107320054.1 | oxalate/formate MFS antiporter | - |
| C9381_RS22920 () | 3649408..3649566 | - | 159 | WP_199852933.1 | hypothetical protein | - |
| C9381_RS17145 () | 3649983..3651419 | + | 1437 | WP_107320055.1 | circularly permuted type 2 ATP-grasp protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|