MGE detailed information
MGE type: Prophage MGE length: 39160 bp
Accession: NZ_CP028349 Location: 2449532..2488691 Organism: Pantoea vagans strain PV989 Replicon: chromosome
Accession: NZ_CP028349 Location: 2449532..2488691 Organism: Pantoea vagans strain PV989 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9381_RS11560 () | 2445778..2446335 | + | 558 | WP_033783036.1 | helix-turn-helix domain-containing protein | - |
| C9381_RS11565 () | 2446402..2446827 | + | 426 | WP_013357804.1 | MarR family transcriptional regulator | - |
| C9381_RS11570 () | 2446843..2447403 | + | 561 | WP_107319651.1 | isochorismatase family protein | - |
| C9381_RS11575 () | 2447445..2449319 | - | 1875 | Protein_2219 | TonB-dependent receptor | - |
| C9381_RS11580 () | 2449532..2450710 | + | 1179 | WP_107319653.1 | Prophage integrase IntA ; Integrase | Integrase |
| C9381_RS11585 () | 2450691..2450882 | - | 192 | WP_008926250.1 | AlpA family transcriptional regulator | - |
| C9381_RS11590 () | 2450933..2451280 | - | 348 | WP_107319654.1 | hypothetical protein | - |
| C9381_RS11595 () | 2451280..2451759 | - | 480 | WP_199852920.1 | class I SAM-dependent methyltransferase | - |
| C9381_RS11600 () | 2451756..2452340 | - | 585 | WP_107319656.1 | hypothetical protein | - |
| C9381_RS11605 () | 2452353..2452757 | - | 405 | WP_107319657.1 | hypothetical protein | - |
| C9381_RS11610 () | 2452754..2453197 | - | 444 | WP_107319658.1 | hypothetical protein | - |
| C9381_RS11615 () | 2453209..2453373 | - | 165 | WP_033771331.1 | DUF1317 family protein | - |
| C9381_RS11620 () | 2453360..2453878 | - | 519 | WP_107319659.1 | hypothetical protein | - |
| C9381_RS22890 () | 2454522..2454659 | - | 138 | WP_164973012.1 | hypothetical protein | - |
| C9381_RS11625 () | 2454859..2455512 | - | 654 | WP_033743081.1 | helix-turn-helix domain-containing protein | - |
| C9381_RS11630 () | 2455612..2455809 | + | 198 | WP_107319660.1 | hypothetical protein | - |
| C9381_RS11635 () | 2455834..2456370 | + | 537 | WP_107319661.1 | hypothetical protein | - |
| C9381_RS11645 () | 2456658..2456840 | + | 183 | WP_010245217.1 | DUF4222 domain-containing protein | - |
| C9381_RS11650 () | 2456837..2457733 | + | 897 | WP_107319663.1 | conserved phage C-terminal domain-containing protein | - |
| C9381_RS11655 () | 2457746..2458180 | + | 435 | WP_107319664.1 | PerC family transcriptional regulator | - |
| C9381_RS11660 () | 2458803..2459759 | + | 957 | WP_199852946.1 | DUF550 domain-containing protein | - |
| C9381_RS11665 () | 2459756..2460052 | + | 297 | WP_107319666.1 | hypothetical protein | - |
| C9381_RS11670 () | 2460049..2460246 | + | 198 | WP_107319667.1 | hypothetical protein | - |
| C9381_RS11675 () | 2460243..2460608 | + | 366 | WP_107320177.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9381_RS11680 () | 2460763..2461479 | + | 717 | WP_107319668.1 | phage antirepressor KilAC domain-containing protein | - |
| C9381_RS11685 () | 2461476..2462492 | + | 1017 | WP_107319669.1 | DUF968 domain-containing protein | - |
| C9381_RS11690 () | 2462514..2462942 | + | 429 | WP_107319670.1 | antitermination protein Q | - |
| C9381_RS11700 () | 2463246..2463422 | + | 177 | WP_052271421.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C9381_RS11705 () | 2463471..2463878 | + | 408 | WP_107319672.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| C9381_RS11710 () | 2464035..2464388 | + | 354 | WP_107319673.1 | phage holin, lambda family | - |
| C9381_RS11715 () | 2464372..2464797 | + | 426 | WP_107319674.1 | lysozyme | - |
| C9381_RS11720 () | 2464794..2465228 | + | 435 | WP_107319675.1 | Rz lytic protein | - |
| C9381_RS11730 () | 2465382..2465621 | + | 240 | WP_107319677.1 | hypothetical protein | - |
| C9381_RS11735 () | 2465664..2465852 | - | 189 | WP_107319678.1 | hypothetical protein | - |
| C9381_RS11745 () | 2466304..2467761 | + | 1458 | WP_107319680.1 | glycosyltransferase | - |
| C9381_RS11750 () | 2467743..2468360 | + | 618 | WP_199852947.1 | hypothetical protein | - |
| C9381_RS11755 () | 2468329..2468682 | + | 354 | WP_107319682.1 | HNH endonuclease | - |
| C9381_RS11760 () | 2468900..2469373 | + | 474 | WP_107319683.1 | phage terminase small subunit P27 family | - |
| C9381_RS11765 () | 2469377..2471107 | + | 1731 | WP_107319684.1 | terminase large subunit | - |
| C9381_RS11770 () | 2471107..2472411 | + | 1305 | WP_107319685.1 | phage portal protein | - |
| C9381_RS11775 () | 2472422..2473270 | + | 849 | WP_107319686.1 | Clp protease ClpP | - |
| C9381_RS11780 () | 2473280..2474491 | + | 1212 | WP_107319687.1 | phage major capsid protein | - |
| C9381_RS11785 () | 2474534..2474860 | + | 327 | WP_107319688.1 | head-tail connector protein | - |
| C9381_RS11790 () | 2474857..2475192 | + | 336 | WP_107319689.1 | phage head closure protein | - |
| C9381_RS11795 () | 2475185..2475568 | + | 384 | WP_107319690.1 | hypothetical protein | - |
| C9381_RS11800 () | 2475571..2475972 | + | 402 | WP_107320178.1 | HK97 gp10 family phage protein | - |
| C9381_RS11805 () | 2476006..2476458 | + | 453 | WP_107319691.1 | phage tail protein | - |
| C9381_RS11810 () | 2476513..2476881 | + | 369 | WP_107319692.1 | phage tail protein | - |
| C9381_RS11820 () | 2477123..2480470 | + | 3348 | WP_107319694.1 | phage tail tape measure protein | - |
| C9381_RS11825 () | 2480473..2480814 | + | 342 | WP_107319695.1 | phage tail protein | - |
| C9381_RS11830 () | 2480866..2481603 | + | 738 | WP_107319696.1 | phage minor tail protein L | - |
| C9381_RS11835 () | 2481606..2482325 | + | 720 | WP_107319697.1 | C40 family peptidase | - |
| C9381_RS11840 () | 2482318..2482941 | + | 624 | WP_107319698.1 | tail assembly protein | - |
| C9381_RS11845 () | 2482998..2486204 | + | 3207 | WP_107319699.1 | host specificity protein J | - |
| C9381_RS11850 () | 2486214..2486519 | + | 306 | WP_107319700.1 | hypothetical protein | - |
| C9381_RS11855 () | 2486516..2487166 | + | 651 | WP_107319701.1 | hypothetical protein | - |
| C9381_RS11860 () | 2487247..2487531 | + | 285 | WP_107320179.1 | TonB family protein | - |
| C9381_RS22775 () | 2487591..2488691 | + | 1101 | WP_159053829.1 | tail fiber domain-containing protein | - |
| C9381_RS11870 () | 2489042..2490934 | - | 1893 | WP_107319702.1 | SIR2 family protein | - |
| C9381_RS11875 () | 2491469..2491708 | + | 240 | WP_107319703.1 | DNA polymerase V | - |
| C9381_RS11880 () | 2491710..2492033 | + | 324 | WP_107319704.1 | phage repressor protein | - |
| C9381_RS11885 () | 2492064..2492135 | - | 72 | WP_010245103.1 | pyrroloquinoline quinone precursor peptide PqqA | - |
| C9381_RS11890 () | 2492283..2492555 | - | 273 | WP_107319705.1 | TonB-dependent receptor plug domain-containing protein | - |
| C9381_RS11895 () | 2492738..2493607 | + | 870 | WP_107319706.1 | NAD(P)-dependent oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|