MGE detailed information
MGE type: Conjugative plasmid MGE length: 114229 bp
Accession: NZ_CP028321 Location: 1..114229 Organism: Escherichia coli O18:H1 strain CFSAN067215 Replicon: plasmid p0.1229_1
Accession: NZ_CP028321 Location: 1..114229 Organism: Escherichia coli O18:H1 strain CFSAN067215 Replicon: plasmid p0.1229_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7X15_RS24720 () | 169..441 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| C7X15_RS24725 () | 887..1062 | + | 176 | Protein_1 | IS3 family transposase | - |
| C7X15_RS24730 () | 1288..2457 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| C7X15_RS24735 () | 2824..3012 | + | 189 | WP_001332784.1 | hypothetical protein | - |
| C7X15_RS24740 () | 3133..3873 | + | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| C7X15_RS24745 () | 4116..5093 | - | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| C7X15_RS24760 () | 6268..6909 | - | 642 | WP_000990667.1 | hypothetical protein | - |
| C7X15_RS24770 () | 9231..9449 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C7X15_RS24775 () | 9451..9756 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C7X15_RS24780 () | 9757..10566 | + | 810 | WP_000016979.1 | site-specific integrase | - |
| C7X15_RS24785 () | 10704..10979 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| C7X15_RS24790 () | 10973..11617 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| C7X15_RS24795 () | 11846..12817 | + | 972 | WP_001103694.1 | hypothetical protein | - |
| C7X15_RS24800 () | 12822..13214 | + | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| C7X15_RS24805 () | 13219..14489 | - | 1271 | Protein_14 | translesion error-prone DNA polymerase V subunit UmuC | - |
| C7X15_RS24810 () | 14489..14926 | - | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C7X15_RS24815 () | 14923..15171 | - | 249 | WP_000619112.1 | DinI-like family protein | - |
| C7X15_RS24825 () | 15306..15824 | + | 519 | WP_000115885.1 | hypothetical protein | VF |
| C7X15_RS24830 () | 15843..17063 | + | 1221 | WP_000343766.1 | ISL3 family transposase ISEc53 | Transposase |
| C7X15_RS24840 () | 17482..18312 | + | 831 | WP_001298676.1 | DUF1281 domain-containing protein | - |
| C7X15_RS24845 () | 18306..19103 | - | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| C7X15_RS24850 () | 19103..20275 | - | 1173 | WP_000952372.1 | IS21 family transposase IS21 | Transposase |
| C7X15_RS24855 () | 20316..20519 | + | 204 | WP_001298677.1 | hypothetical protein | - |
| C7X15_RS24860 () | 20516..20827 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| C7X15_RS24865 () | 20903..21586 | + | 684 | WP_000086169.1 | DNA methylase | - |
| C7X15_RS24870 () | 21587..21808 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| C7X15_RS24875 () | 21822..22256 | + | 435 | WP_000274508.1 | DUF1380 family protein | - |
| C7X15_RS26600 () | 22301..23071 | + | 771 | WP_001004562.1 | hypothetical protein | - |
| C7X15_RS24895 () | 23610..23912 | + | 303 | WP_001666994.1 | antirestriction protein | - |
| C7X15_RS24900 () | 23959..24381 | + | 423 | WP_000271708.1 | DUF1380 family protein | - |
| C7X15_RS26500 () | 24378..24569 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| C7X15_RS26605 () | 24539..25019 | - | 481 | Protein_31 | hypothetical protein | - |
| C7X15_RS24920 () | 25532..25762 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| C7X15_RS24925 () | 25814..27175 | + | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| C7X15_RS24930 () | 27222..27785 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| C7X15_RS24940 () | 27871..28329 | - | 459 | WP_011478091.1 | hypothetical protein | - |
| C7X15_RS24950 () | 28631..29158 | + | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| C7X15_RS24955 () | 29215..29448 | + | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| C7X15_RS24960 () | 29507..31465 | + | 1959 | WP_001145500.1 | ParB/RepB/Spo0J family partition protein | - |
| C7X15_RS24965 () | 31520..31954 | + | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| C7X15_RS24970 () | 31951..32670 | + | 720 | WP_001276230.1 | plasmid SOS inhibition protein A | - |
| - () | 32682..32881 | + | 200 | NuclAT_0 | - | - |
| - () | 32682..32881 | + | 200 | NuclAT_0 | - | - |
| - () | 32682..32881 | + | 200 | NuclAT_0 | - | - |
| - () | 32682..32881 | + | 200 | NuclAT_0 | - | - |
| C7X15_RS24975 () | 32946..33104 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| C7X15_RS24995 () | 34020..34307 | + | 288 | WP_000107526.1 | hypothetical protein | - |
| C7X15_RS25000 () | 34426..35247 | + | 822 | WP_001234489.1 | DUF945 domain-containing protein | - |
| C7X15_RS25005 () | 35543..36145 | - | 603 | WP_001323326.1 | hypothetical protein | VF |
| C7X15_RS25010 () | 36476..36859 | + | 384 | WP_001151562.1 | relaxosome protein TraM | - |
| C7X15_RS25015 () | 37053..37739 | + | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| C7X15_RS25020 () | 37833..38060 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| C7X15_RS25025 () | 38094..38453 | + | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| C7X15_RS25030 () | 38468..38779 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| C7X15_RS25035 () | 38801..39367 | + | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| C7X15_RS25040 () | 39378..40082 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| C7X15_RS25045 () | 40082..41509 | + | 1428 | WP_135801363.1 | conjugal transfer protein TraB | - |
| C7X15_RS25050 () | 41499..42089 | + | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| C7X15_RS25055 () | 42043..42396 | + | 354 | WP_071586423.1 | conjugal transfer protein TrbD | - |
| C7X15_RS25060 () | 42408..42641 | + | 234 | WP_000235790.1 | conjugal transfer protein TrbG | - |
| C7X15_RS25065 () | 42638..43153 | + | 516 | WP_000809889.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C7X15_RS25070 () | 43288..43509 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| C7X15_RS25075 () | 43502..43975 | + | 474 | WP_000549566.1 | hypothetical protein | - |
| C7X15_RS25080 () | 44055..44273 | + | 219 | WP_000556746.1 | hypothetical protein | - |
| C7X15_RS25090 () | 44640..47270 | + | 2631 | WP_000069778.1 | type IV secretion system protein TraC | - |
| C7X15_RS25095 () | 47267..47653 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| C7X15_RS25100 () | 47650..48282 | + | 633 | WP_001203736.1 | type-F conjugative transfer system protein TraW | - |
| C7X15_RS25105 () | 48279..49271 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| C7X15_RS25110 () | 49301..49606 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| C7X15_RS25115 () | 49615..50253 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C7X15_RS25120 () | 50250..52100 | + | 1851 | WP_000821859.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C7X15_RS25125 () | 52127..52384 | + | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| C7X15_RS25130 () | 52377..53120 | + | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C7X15_RS25135 () | 53134..53475 | + | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| C7X15_RS25140 () | 53456..53791 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| C7X15_RS25145 () | 53872..54156 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C7X15_RS25150 () | 54143..54688 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C7X15_RS25155 () | 54618..54965 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| C7X15_RS25160 () | 54913..55338 | + | 426 | WP_001323332.1 | F-type conjugal transfer protein TrbF | - |
| C7X15_RS25165 () | 55325..56698 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| C7X15_RS25170 () | 56695..59517 | + | 2823 | WP_001007080.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C7X15_RS25175 () | 59533..60018 | + | 486 | WP_000605869.1 | hypothetical protein | - |
| C7X15_RS25180 () | 60067..60798 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| C7X15_RS25185 () | 61001..61738 | + | 738 | WP_000199901.1 | hypothetical protein | - |
| C7X15_RS25190 () | 61789..63933 | + | 2145 | WP_000009347.1 | type IV conjugative transfer system coupling protein TraD | - |
| C7X15_RS25195 () | 63933..69202 | + | 5270 | Protein_81 | Multifunctional conjugation protein TraI | Relaxase |
| C7X15_RS25200 () | 69222..69968 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| C7X15_RS25205 () | 70027..70887 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| C7X15_RS25210 () | 70990..71550 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| C7X15_RS25215 () | 71679..71891 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| C7X15_RS25220 () | 72136..72597 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| C7X15_RS25225 () | 72643..72852 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| C7X15_RS25230 () | 72890..73480 | + | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| C7X15_RS25235 () | 73720..73980 | + | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| C7X15_RS25245 () | 74213..74287 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C7X15_RS25250 () | 74280..75137 | + | 858 | WP_000131004.1 | incFII family plasmid replication initiator RepA | - |
| C7X15_RS25265 () | 76193..76897 | + | 705 | WP_001067837.1 | IS6 family transposase IS26 | Transposase |
| C7X15_RS25275 () | 76927..77154 | + | 228 | WP_077459403.1 | DsbA family protein | - |
| C7X15_RS25280 () | 77144..77650 | + | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| C7X15_RS25285 () | 77833..78648 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| C7X15_RS25295 () | 78995..80881 | + | 1887 | WP_001332815.1 | FTR1 family iron permease | - |
| C7X15_RS25300 () | 80922..81449 | + | 528 | WP_000178050.1 | iron transporter | - |
| C7X15_RS25305 () | 81553..82932 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| C7X15_RS25310 () | 82935..84218 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| C7X15_RS25315 () | 84208..85338 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| C7X15_RS25320 () | 85343..86038 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| C7X15_RS25325 () | 86025..86510 | + | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| C7X15_RS25330 () | 86535..87020 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| C7X15_RS25335 () | 87142..87775 | + | 634 | Protein_104 | histidine-type phosphatase | - |
| C7X15_RS26610 () | 87925..88098 | - | 174 | Protein_105 | IS5 family transposase ISKpn26 | Transposase |
| C7X15_RS26615 () | 88099..88413 | - | 315 | Protein_106 | IS5 family transposase ISKpn26 | Transposase |
| C7X15_RS25350 () | 89086..89436 | - | 351 | Protein_107 | IS3 family transposase IS629 | Transposase |
| C7X15_RS25355 () | 89522..91021 | + | 1500 | WP_000143800.1 | IS21 family transposase ISEc10 | Transposase |
| C7X15_RS25360 () | 91018..91773 | + | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| C7X15_RS25365 () | 91664..92241 | - | 578 | Protein_110 | IS3 family transposase IS629 | Transposase |
| C7X15_RS25370 () | 92267..92572 | + | 306 | Protein_111 | IS91 family transposase ISSbo1 | Transposase |
| C7X15_RS25375 () | 93095..94270 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| C7X15_RS25385 () | 94339..96600 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| C7X15_RS25390 () | 96769..97545 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| C7X15_RS25395 () | 97553..98428 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| C7X15_RS25400 () | 98760..99446 | - | 687 | Protein_116 | replication initiation protein | - |
| C7X15_RS25420 () | 100898..101233 | - | 336 | WP_001080732.1 | colicin transporter | - |
| C7X15_RS25425 () | 101362..101709 | + | 348 | WP_000142452.1 | hypothetical protein | - |
| C7X15_RS25430 () | 101729..102238 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| C7X15_RS25435 () | 102235..102495 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| C7X15_RS25440 () | 102597..103336 | + | 740 | Protein_121 | IS3 family transposase IS629 | Transposase |
| C7X15_RS25450 () | 104009..105517 | + | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| C7X15_RS25455 () | 105607..105990 | + | 384 | Protein_123 | IS3 family transposase IS629 | Transposase |
| C7X15_RS25460 () | 106019..106423 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| C7X15_RS25465 () | 106420..106767 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C7X15_RS25470 () | 106816..107761 | + | 946 | Protein_126 | IS66 family transposase ISEc8 | Transposase |
| C7X15_RS25475 () | 107847..108869 | + | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| C7X15_RS25480 () | 108866..109648 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| C7X15_RS25485 () | 109716..110324 | + | 609 | Protein_129 | IS66 family transposase ISEc22 | Transposase |
| C7X15_RS25490 () | 110387..111178 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| C7X15_RS25495 () | 111185..113155 | - | 1971 | WP_001298664.1 | Hemin receptor | VF |
| C7X15_RS25500 () | 113437..113873 | + | 437 | Protein_132 | IS3 family transposase IS2 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|