MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 85320 bp
Accession: NZ_CP028272 Location: 1..85320 Organism: Mixta intestinalis strain SRCM103226 Replicon: plasmid unnamed1
Accession: NZ_CP028272 Location: 1..85320 Organism: Mixta intestinalis strain SRCM103226 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M51_RS21750 () | 1635..2033 | + | 399 | WP_160623742.1 | DNA-binding protein | - |
| C7M51_RS21755 () | 2204..3532 | + | 1329 | WP_160623743.1 | DUF1173 family protein | - |
| C7M51_RS21760 () | 3628..3891 | + | 264 | WP_160623744.1 | DUF1003 domain-containing protein | - |
| C7M51_RS21765 () | 3948..4238 | + | 291 | Protein_3 | Recombination-promoting nuclease RpnA | VF |
| C7M51_RS21770 () | 4299..4604 | + | 306 | WP_160623745.1 | hypothetical protein | - |
| C7M51_RS21775 () | 4777..5718 | + | 942 | WP_160623746.1 | Recombination-promoting nuclease RpnD | VF |
| C7M51_RS21780 () | 6548..7081 | + | 534 | WP_160623747.1 | hypothetical protein | - |
| C7M51_RS21785 () | 7178..7827 | + | 650 | Protein_7 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| C7M51_RS21790 () | 7728..8051 | - | 324 | WP_160623819.1 | WYL domain-containing protein | - |
| C7M51_RS21795 () | 8107..8403 | - | 297 | WP_160623748.1 | HTH domain-containing protein | - |
| C7M51_RS21800 () | 9482..10882 | + | 1401 | WP_160623749.1 | coproporphyrinogen III oxidase family protein | - |
| C7M51_RS21805 () | 10898..11623 | + | 726 | WP_160623750.1 | hypothetical protein | - |
| C7M51_RS21810 () | 11616..12044 | + | 429 | WP_160623751.1 | hypothetical protein | - |
| C7M51_RS21815 () | 12041..12970 | + | 930 | WP_160623752.1 | hypothetical protein | - |
| C7M51_RS21820 () | 12963..13700 | + | 738 | WP_160623753.1 | cyclase family protein | - |
| C7M51_RS21825 () | 13697..14845 | + | 1149 | WP_160623754.1 | hypothetical protein | - |
| C7M51_RS21830 () | 14838..15488 | + | 651 | WP_160623755.1 | hypothetical protein | - |
| C7M51_RS21835 () | 15472..15930 | + | 459 | WP_160623756.1 | hypothetical protein | - |
| C7M51_RS21840 () | 15930..16343 | + | 414 | WP_160623757.1 | EVE domain-containing protein | - |
| C7M51_RS22350 () | 16343..16720 | + | 378 | WP_208852155.1 | hypothetical protein | - |
| C7M51_RS21850 () | 16730..17878 | + | 1149 | WP_160623758.1 | MFS transporter | - |
| C7M51_RS21855 () | 17901..18341 | + | 441 | WP_160623759.1 | hypothetical protein | - |
| C7M51_RS21860 () | 18319..18927 | - | 609 | WP_160623760.1 | 4'-phosphopantetheinyl transferase superfamily protein | - |
| C7M51_RS21865 () | 19113..19280 | - | 168 | Protein_23 | transposase | - |
| C7M51_RS21870 () | 19470..19988 | + | 519 | WP_160623761.1 | hypothetical protein | - |
| C7M51_RS21875 () | 20870..21883 | - | 1014 | WP_160623762.1 | replication initiation protein | - |
| C7M51_RS21880 () | 21876..21953 | - | 78 | WP_160623820.1 | RepA leader peptide Tap | - |
| C7M51_RS21885 () | 22182..22430 | - | 249 | WP_160623763.1 | replication regulatory protein RepA | - |
| C7M51_RS21890 () | 22708..27855 | - | 5148 | WP_160623764.1 | Multifunctional conjugation protein TraI | Relaxase |
| C7M51_RS21895 () | 27864..29951 | - | 2088 | WP_160623765.1 | type IV conjugative transfer system coupling protein TraD | - |
| C7M51_RS21900 () | 30078..30983 | - | 906 | WP_160623766.1 | hypothetical protein | - |
| C7M51_RS21905 () | 31152..31682 | - | 531 | WP_160623767.1 | hypothetical protein | - |
| C7M51_RS21910 () | 31688..34537 | - | 2850 | WP_160623768.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C7M51_RS21915 () | 34544..35905 | - | 1362 | WP_160623769.1 | conjugal transfer protein TraH | - |
| C7M51_RS21920 () | 35905..36447 | - | 543 | WP_160623770.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C7M51_RS21925 () | 36451..37230 | - | 780 | WP_160623771.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C7M51_RS21930 () | 37233..39077 | - | 1845 | WP_160623772.1 | conjugal transfer protein TraN | - |
| C7M51_RS21935 () | 39192..39569 | - | 378 | WP_160623821.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C7M51_RS21940 () | 39625..40638 | - | 1014 | WP_160623773.1 | conjugal transfer pilus assembly protein TraU | - |
| C7M51_RS21945 () | 40650..41279 | - | 630 | WP_160623774.1 | type-F conjugative transfer system protein TraW | - |
| C7M51_RS21950 () | 41335..41688 | - | 354 | WP_160623775.1 | TrbI F-type domain-containing protein | - |
| C7M51_RS21955 () | 41685..44291 | - | 2607 | WP_160623776.1 | type IV secretion system protein TraC | - |
| C7M51_RS21960 () | 44299..44850 | - | 552 | WP_160623777.1 | TraV family lipoprotein | - |
| C7M51_RS21965 () | 44843..45199 | - | 357 | WP_160623778.1 | hypothetical protein | - |
| C7M51_RS21970 () | 45196..46563 | - | 1368 | WP_160623779.1 | hypothetical protein | - |
| C7M51_RS21975 () | 46553..47278 | - | 726 | WP_160623780.1 | type-F conjugative transfer system secretin TraK | - |
| C7M51_RS21980 () | 47271..47843 | - | 573 | WP_160623781.1 | hypothetical protein | - |
| C7M51_RS21985 () | 47863..48159 | - | 297 | WP_160623782.1 | type IV conjugative transfer system protein TraL | - |
| C7M51_RS21990 () | 48170..48496 | - | 327 | WP_160623783.1 | TraA fimbrial protein precursor | - |
| C7M51_RS21995 () | 48772..50079 | + | 1308 | WP_160623784.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| C7M51_RS22000 () | 50132..50533 | - | 402 | WP_160623785.1 | hypothetical protein | - |
| C7M51_RS22005 () | 50827..51444 | + | 618 | WP_160623786.1 | hypothetical protein | VF |
| C7M51_RS22010 () | 51519..51929 | - | 411 | WP_160623822.1 | hypothetical protein | - |
| C7M51_RS22015 () | 52239..52616 | - | 378 | WP_160623787.1 | hypothetical protein | - |
| C7M51_RS22020 () | 53690..54034 | - | 345 | WP_160623788.1 | hypothetical protein | - |
| C7M51_RS22025 () | 54088..54483 | - | 396 | WP_160623789.1 | ammonia monooxygenase | - |
| C7M51_RS22030 () | 54696..55046 | + | 351 | WP_160623790.1 | hypothetical protein | - |
| C7M51_RS22035 () | 55777..56283 | - | 507 | WP_160623791.1 | conjugation system SOS inhibitor PsiB | - |
| C7M51_RS22040 () | 56379..56927 | - | 549 | WP_160623792.1 | single-stranded DNA-binding protein | - |
| C7M51_RS22045 () | 57390..57623 | - | 234 | WP_160623793.1 | hypothetical protein | - |
| C7M51_RS22050 () | 57623..58138 | - | 516 | Protein_60 | plasmid SOS inhibition protein A | - |
| C7M51_RS22055 () | 58155..60142 | - | 1988 | Protein_61 | ParB/RepB/Spo0J family partition protein | - |
| C7M51_RS22060 () | 60188..60424 | - | 237 | WP_160623794.1 | DUF905 domain-containing protein | - |
| C7M51_RS22065 () | 61210..61635 | - | 426 | WP_160623795.1 | hypothetical protein | - |
| C7M51_RS22070 () | 62862..63215 | - | 354 | WP_160623796.1 | protein stbB | - |
| C7M51_RS22075 () | 63221..64177 | - | 957 | WP_160623823.1 | plasmid segregation protein ParM | - |
| C7M51_RS22080 () | 64460..64876 | + | 417 | WP_160623797.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C7M51_RS22085 () | 64879..66147 | + | 1269 | WP_160623798.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| C7M51_RS22090 () | 66445..67299 | + | 855 | WP_160623799.1 | replication initiation protein | - |
| C7M51_RS22095 () | 68305..68556 | - | 252 | WP_160623800.1 | DUF1456 family protein | - |
| C7M51_RS22100 () | 68692..68988 | - | 297 | WP_160623824.1 | chromosome segregation protein ParM | - |
| C7M51_RS22105 () | 69261..69443 | + | 183 | WP_160623801.1 | ribbon-helix-helix domain-containing protein | - |
| C7M51_RS22110 () | 69951..70913 | - | 963 | WP_160623802.1 | ParB/RepB/Spo0J family partition protein | - |
| C7M51_RS22115 () | 70910..72115 | - | 1206 | WP_160623803.1 | AAA family ATPase | - |
| C7M51_RS22120 () | 72388..73317 | + | 930 | WP_160623804.1 | Recombination-promoting nuclease RpnA | VF |
| C7M51_RS22125 () | 73559..74227 | - | 669 | WP_160623805.1 | hypothetical protein | - |
| C7M51_RS22130 () | 74283..75056 | - | 774 | WP_160623806.1 | IS91 family transposase ISSod25 | Transposase |
| C7M51_RS22135 () | 75331..75876 | - | 546 | WP_160623807.1 | hypothetical protein | - |
| C7M51_RS22140 () | 75873..76076 | - | 204 | WP_167522398.1 | hypothetical protein | - |
| C7M51_RS22145 () | 76177..77100 | - | 924 | WP_160623809.1 | hypothetical protein | - |
| C7M51_RS22150 () | 77720..77950 | + | 231 | WP_160623810.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C7M51_RS22155 () | 77947..78399 | + | 453 | WP_160623811.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C7M51_RS22160 () | 78423..78701 | + | 279 | WP_160623812.1 | hypothetical protein | - |
| C7M51_RS22165 () | 78771..79115 | + | 345 | WP_160250113.1 | IS200-IS605 family transposase IS200H | Transposase |
| C7M51_RS22170 () | 79133..80404 | - | 1272 | WP_160623813.1 | hypothetical protein | - |
| C7M51_RS22175 () | 80958..81284 | - | 327 | WP_160623814.1 | hypothetical protein | - |
| C7M51_RS22180 () | 81315..81647 | - | 333 | WP_160623815.1 | hypothetical protein | - |
| C7M51_RS22185 () | 82166..83161 | + | 996 | WP_160623816.1 | nucleotidyltransferase | - |
| C7M51_RS22190 () | 83165..84097 | + | 933 | WP_160623817.1 | hypothetical protein | - |
| C7M51_RS22195 () | 84683..85246 | - | 564 | WP_160623818.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|