MGE detailed information
MGE type: IScluster/Tn MGE length: 27869 bp
Accession: NZ_CP028195 Location: 12534..40402 Organism: Escherichia coli strain CFSAN018748 Replicon: plasmid pGMI14-004_1
Accession: NZ_CP028195 Location: 12534..40402 Organism: Escherichia coli strain CFSAN018748 Replicon: plasmid pGMI14-004_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7A99_RS26930 () | 8051..8272 | + | 222 | WP_001104880.1 | hypothetical protein | - |
| C7A99_RS26935 () | 8286..8720 | + | 435 | WP_000274480.1 | DUF1380 family protein | - |
| C7A99_RS26940 () | 8771..9550 | + | 780 | WP_107236378.1 | hypothetical protein | - |
| C7A99_RS26950 () | 10087..10389 | + | 303 | WP_107236377.1 | antirestriction protein | - |
| C7A99_RS26955 () | 10436..10855 | + | 420 | WP_000271717.1 | DUF1380 family protein | - |
| C7A99_RS26960 () | 10855..11046 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C7A99_RS26975 () | 12033..12263 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C7A99_RS27605 () | 12315..12452 | + | 138 | WP_159042855.1 | hypothetical protein | - |
| C7A99_RS26980 () | 12534..13706 | + | 1173 | WP_020219299.1 | IS21 family transposase IS21 | Transposase |
| C7A99_RS26985 () | 13706..14503 | + | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| C7A99_RS26990 () | 14588..15811 | + | 1224 | WP_032174790.1 | DUF3560 domain-containing protein | - |
| C7A99_RS26995 () | 15858..16421 | + | 564 | Protein_20 | class I SAM-dependent methyltransferase | - |
| C7A99_RS27005 () | 16507..16751 | - | 245 | Protein_21 | pilus assembly protein | - |
| C7A99_RS27020 () | 17200..17877 | + | 678 | WP_096101123.1 | IS66 family transposase ISCro1 | Transposase |
| C7A99_RS27025 () | 17877..18224 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| C7A99_RS27030 () | 18244..19814 | + | 1571 | Protein_24 | IS66 family transposase ISCro1 | Transposase |
| C7A99_RS27035 () | 19818..20147 | - | 330 | WP_107236367.1 | IS66 family transposase ISCro1 | Transposase |
| C7A99_RS27040 () | 20147..20824 | - | 678 | WP_096101123.1 | IS66 family transposase ISCro1 | Transposase |
| C7A99_RS27050 () | 20901..21116 | + | 216 | WP_032166857.1 | hypothetical protein | - |
| C7A99_RS27740 () | 21360..21446 | + | 87 | Protein_28 | endonuclease | - |
| C7A99_RS27060 () | 21627..21938 | - | 312 | WP_000765906.1 | hypothetical protein | - |
| - () | 22234..22295 | - | 62 | NuclAT_0 | - | - |
| - () | 22234..22295 | - | 62 | NuclAT_0 | - | - |
| - () | 22234..22295 | - | 62 | NuclAT_0 | - | - |
| - () | 22234..22295 | - | 62 | NuclAT_0 | - | - |
| C7A99_RS27080 () | 23600..23740 | + | 141 | WP_064717426.1 | type I toxin-antitoxin system Hok family toxin | - |
| C7A99_RS27085 () | 24020..24277 | + | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| C7A99_RS27095 () | 24511..24585 | + | 75 | WP_032319616.1 | RepA leader peptide Tap | - |
| C7A99_RS27100 () | 24578..25599 | + | 1022 | Protein_34 | replication initiation protein | - |
| C7A99_RS27110 () | 26512..26781 | + | 270 | WP_000079930.1 | hypothetical protein | Antitoxin Detail |
| C7A99_RS27115 () | 26778..27059 | + | 282 | WP_107236369.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C7A99_RS27745 () | 27105..27834 | + | 730 | Protein_37 | 3'-5' exonuclease | - |
| C7A99_RS27130 () | 27904..28149 | - | 246 | Protein_38 | DDE-type integrase/transposase/recombinase | - |
| C7A99_RS27140 () | 28559..29418 | - | 860 | Protein_39 | IS3 family transposase | - |
| C7A99_RS27150 () | 29532..29928 | - | 397 | Protein_40 | ATP-binding protein | - |
| C7A99_RS27155 () | 30276..30650 | - | 375 | WP_015675362.1 | Heat-labile enterotoxin B chain | VF |
| C7A99_RS27160 () | 30647..31396 | - | 750 | WP_071782049.1 | Heat-labile enterotoxin A chain | VF |
| C7A99_RS27170 () | 32289..33002 | + | 714 | WP_107236370.1 | hypothetical protein | - |
| C7A99_RS27175 () | 33214..34185 | + | 972 | WP_039022832.1 | IS481 family transposase ISEc18 | Transposase |
| C7A99_RS27180 () | 34277..34920 | - | 644 | Protein_45 | DDE-type integrase/transposase/recombinase | - |
| C7A99_RS27185 () | 34946..35525 | + | 580 | Protein_46 | IS256 family transposase | - |
| C7A99_RS27190 () | 36002..36217 | + | 216 | WP_000739296.1 | heat-stable enterotoxin ST-II | - |
| C7A99_RS27195 () | 36605..37715 | + | 1111 | WP_096932382.1 | IS3 family transposase | - |
| C7A99_RS27200 () | 37831..39366 | - | 1536 | WP_001424993.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| C7A99_RS27210 () | 39663..40402 | - | 740 | Protein_50 | IS110 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|