MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 68950 bp
Accession: NZ_CP028195 Location: 1..68950 Organism: Escherichia coli strain CFSAN018748 Replicon: plasmid pGMI14-004_1
Accession: NZ_CP028195 Location: 1..68950 Organism: Escherichia coli strain CFSAN018748 Replicon: plasmid pGMI14-004_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7A99_RS26870 () | 76..291 | - | 216 | WP_001340797.1 | hypothetical protein | - |
| C7A99_RS26880 () | 662..1867 | + | 1206 | WP_000817634.1 | Plasmid partition protein A | VF |
| C7A99_RS26885 () | 1864..2826 | + | 963 | WP_000756327.1 | ParB/RepB/Spo0J family partition protein | - |
| C7A99_RS26890 () | 3060..3837 | + | 778 | Protein_3 | hypothetical protein | - |
| C7A99_RS26900 () | 4003..4146 | + | 144 | WP_000270807.1 | DUF1281 domain-containing protein | - |
| C7A99_RS26905 () | 4153..4512 | + | 360 | WP_001385002.1 | DUF1281 domain-containing protein | - |
| C7A99_RS26915 () | 4576..4887 | + | 312 | WP_001309256.1 | hypothetical protein | - |
| C7A99_RS26920 () | 5117..6817 | - | 1701 | WP_000125555.1 | group II intron reverse transcriptase/maturase | - |
| C7A99_RS26925 () | 7397..8050 | + | 654 | WP_000769465.1 | DNA methylase | - |
| C7A99_RS26930 () | 8051..8272 | + | 222 | WP_001104880.1 | hypothetical protein | - |
| C7A99_RS26935 () | 8286..8720 | + | 435 | WP_000274480.1 | DUF1380 family protein | - |
| C7A99_RS26940 () | 8771..9550 | + | 780 | WP_107236378.1 | hypothetical protein | - |
| C7A99_RS26950 () | 10087..10389 | + | 303 | WP_107236377.1 | antirestriction protein | - |
| C7A99_RS26955 () | 10436..10855 | + | 420 | WP_000271717.1 | DUF1380 family protein | - |
| C7A99_RS26960 () | 10855..11046 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C7A99_RS26975 () | 12033..12263 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C7A99_RS27605 () | 12315..12452 | + | 138 | WP_159042855.1 | hypothetical protein | - |
| C7A99_RS26980 () | 12534..13706 | + | 1173 | WP_020219299.1 | IS21 family transposase IS21 | Transposase |
| C7A99_RS26985 () | 13706..14503 | + | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| C7A99_RS26990 () | 14588..15811 | + | 1224 | WP_032174790.1 | DUF3560 domain-containing protein | - |
| C7A99_RS26995 () | 15858..16421 | + | 564 | Protein_20 | class I SAM-dependent methyltransferase | - |
| C7A99_RS27005 () | 16507..16751 | - | 245 | Protein_21 | pilus assembly protein | - |
| C7A99_RS27020 () | 17200..17877 | + | 678 | WP_096101123.1 | IS66 family transposase ISCro1 | Transposase |
| C7A99_RS27025 () | 17877..18224 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| C7A99_RS27030 () | 18244..19814 | + | 1571 | Protein_24 | IS66 family transposase ISCro1 | Transposase |
| C7A99_RS27035 () | 19818..20147 | - | 330 | WP_107236367.1 | IS66 family transposase ISCro1 | Transposase |
| C7A99_RS27040 () | 20147..20824 | - | 678 | WP_096101123.1 | IS66 family transposase ISCro1 | Transposase |
| C7A99_RS27050 () | 20901..21116 | + | 216 | WP_032166857.1 | hypothetical protein | - |
| C7A99_RS27740 () | 21360..21446 | + | 87 | Protein_28 | endonuclease | - |
| C7A99_RS27060 () | 21627..21938 | - | 312 | WP_000765906.1 | hypothetical protein | - |
| - () | 22234..22295 | - | 62 | NuclAT_0 | - | - |
| - () | 22234..22295 | - | 62 | NuclAT_0 | - | - |
| - () | 22234..22295 | - | 62 | NuclAT_0 | - | - |
| - () | 22234..22295 | - | 62 | NuclAT_0 | - | - |
| C7A99_RS27080 () | 23600..23740 | + | 141 | WP_064717426.1 | type I toxin-antitoxin system Hok family toxin | - |
| C7A99_RS27085 () | 24020..24277 | + | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| C7A99_RS27095 () | 24511..24585 | + | 75 | WP_032319616.1 | RepA leader peptide Tap | - |
| C7A99_RS27100 () | 24578..25599 | + | 1022 | Protein_34 | replication initiation protein | - |
| C7A99_RS27110 () | 26512..26781 | + | 270 | WP_000079930.1 | hypothetical protein | Antitoxin Detail |
| C7A99_RS27115 () | 26778..27059 | + | 282 | WP_107236369.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C7A99_RS27745 () | 27105..27834 | + | 730 | Protein_37 | 3'-5' exonuclease | - |
| C7A99_RS27130 () | 27904..28149 | - | 246 | Protein_38 | DDE-type integrase/transposase/recombinase | - |
| C7A99_RS27140 () | 28559..29418 | - | 860 | Protein_39 | IS3 family transposase | - |
| C7A99_RS27150 () | 29532..29928 | - | 397 | Protein_40 | ATP-binding protein | - |
| C7A99_RS27155 () | 30276..30650 | - | 375 | WP_015675362.1 | Heat-labile enterotoxin B chain | VF |
| C7A99_RS27160 () | 30647..31396 | - | 750 | WP_071782049.1 | Heat-labile enterotoxin A chain | VF |
| C7A99_RS27170 () | 32289..33002 | + | 714 | WP_107236370.1 | hypothetical protein | - |
| C7A99_RS27175 () | 33214..34185 | + | 972 | WP_039022832.1 | IS481 family transposase ISEc18 | Transposase |
| C7A99_RS27180 () | 34277..34920 | - | 644 | Protein_45 | DDE-type integrase/transposase/recombinase | - |
| C7A99_RS27185 () | 34946..35525 | + | 580 | Protein_46 | IS256 family transposase | - |
| C7A99_RS27190 () | 36002..36217 | + | 216 | WP_000739296.1 | heat-stable enterotoxin ST-II | - |
| C7A99_RS27195 () | 36605..37715 | + | 1111 | WP_096932382.1 | IS3 family transposase | - |
| C7A99_RS27200 () | 37831..39366 | - | 1536 | WP_001424993.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| C7A99_RS27210 () | 39663..40402 | - | 740 | Protein_50 | IS110 family transposase | - |
| C7A99_RS27215 () | 40629..48032 | - | 7404 | WP_159042857.1 | Ig-like domain repeat protein | - |
| C7A99_RS27220 () | 48115..50058 | - | 1944 | WP_096932383.1 | ATP-binding cassette domain-containing protein | - |
| C7A99_RS27225 () | 50061..50555 | - | 495 | WP_107236372.1 | hypothetical protein | - |
| C7A99_RS27230 () | 50545..51801 | - | 1257 | WP_063119459.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| C7A99_RS27235 () | 51804..53039 | - | 1236 | WP_107236373.1 | TolC family protein | - |
| C7A99_RS27240 () | 53036..53824 | - | 789 | WP_089637796.1 | hypothetical protein | - |
| C7A99_RS27245 () | 53824..54291 | - | 468 | WP_063119456.1 | hypothetical protein | - |
| C7A99_RS27250 () | 54295..54612 | - | 318 | WP_086200691.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| C7A99_RS27255 () | 54800..55651 | - | 852 | WP_096932384.1 | Right origin-binding protein | VF |
| C7A99_RS27260 () | 55862..56214 | - | 353 | Protein_60 | IS3 family transposase IS2 | Transposase |
| C7A99_RS27265 () | 56271..56952 | - | 682 | Protein_61 | IS3 family transposase ISKpn38 | Transposase |
| C7A99_RS27270 () | 57044..57807 | + | 764 | Protein_62 | IS3 family transposase IS2 | Transposase |
| C7A99_RS27275 () | 57935..58648 | - | 714 | WP_001423761.1 | IS3 family transposase ISKpn38 | Transposase |
| C7A99_RS27280 () | 58952..59650 | - | 699 | WP_107236375.1 | IS21 family transposase IS100kyp | Transposase |
| C7A99_RS27285 () | 59647..60656 | - | 1010 | Protein_65 | IS21 family transposase IS100kyp | Transposase |
| C7A99_RS27290 () | 60709..61809 | + | 1101 | Protein_66 | IS3 family transposase IS3F | Transposase |
| C7A99_RS27295 () | 62156..62650 | - | 495 | WP_107236376.1 | Transcriptional repressor MprA | VF |
| C7A99_RS27300 () | 63077..63412 | - | 336 | Protein_68 | toxin-activating lysine-acyltransferase | - |
| C7A99_RS27305 () | 63863..63972 | + | 110 | Protein_69 | IS5/IS1182 family transposase | - |
| C7A99_RS27310 () | 64495..64745 | + | 251 | Protein_70 | type II toxin-antitoxin system ParD family antitoxin | - |
| C7A99_RS27330 () | 65389..66129 | + | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| C7A99_RS27335 () | 66414..67391 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| C7A99_RS27345 () | 68071..68319 | - | 249 | Protein_73 | integrase core domain-containing protein | - |
| C7A99_RS27350 () | 68318..68605 | - | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C7A99_RS27355 () | 68602..68853 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|