MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 48684 bp
Accession: NZ_CP028194 Location: 1..48684 Organism: Escherichia coli strain CFSAN018748 Replicon: plasmid pGMI14-004_3
Accession: NZ_CP028194 Location: 1..48684 Organism: Escherichia coli strain CFSAN018748 Replicon: plasmid pGMI14-004_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7A99_RS26510 () | 1636..2637 | + | 1002 | WP_000944895.1 | hypothetical protein | - |
| C7A99_RS26515 () | 2640..3260 | + | 621 | WP_000998643.1 | phage baseplate assembly protein V | - |
| C7A99_RS26520 () | 3257..3724 | + | 468 | WP_107236351.1 | phage tail protein | - |
| C7A99_RS26525 () | 3721..4041 | + | 321 | WP_016265986.1 | hypothetical protein | - |
| C7A99_RS26530 () | 4038..5162 | + | 1125 | WP_000174657.1 | baseplate J/gp47 family protein | - |
| C7A99_RS26535 () | 5155..5736 | + | 582 | WP_000763348.1 | phage tail protein I | - |
| C7A99_RS26540 () | 5767..7656 | + | 1890 | WP_107236352.1 | tail fiber protein | - |
| C7A99_RS26545 () | 7628..8080 | + | 453 | WP_199852832.1 | tail fiber assembly protein | - |
| C7A99_RS26550 () | 8052..8654 | - | 603 | WP_107236354.1 | tail fiber assembly protein | - |
| C7A99_RS26555 () | 8654..9082 | - | 429 | WP_107236355.1 | phage tail protein | - |
| C7A99_RS26560 () | 9110..9640 | - | 531 | WP_107236356.1 | phage tail protein | - |
| C7A99_RS26565 () | 9657..10217 | + | 561 | WP_107236357.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| C7A99_RS26570 () | 10615..11451 | + | 837 | WP_107236358.1 | RepA | - |
| C7A99_RS26580 () | 12095..12382 | + | 288 | WP_000356589.1 | hypothetical protein | - |
| C7A99_RS26585 () | 12406..12669 | + | 264 | WP_000424604.1 | hypothetical protein | - |
| C7A99_RS26590 () | 12914..13261 | + | 348 | WP_000269912.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C7A99_RS26595 () | 13261..13560 | + | 300 | WP_001673379.1 | XRE family transcriptional regulator | Antitoxin Detail |
| C7A99_RS26600 () | 13594..13878 | - | 285 | WP_021542820.1 | hypothetical protein | - |
| C7A99_RS26605 () | 14146..14526 | + | 381 | WP_000061763.1 | hypothetical protein | - |
| C7A99_RS26610 () | 14590..14862 | + | 273 | WP_000148348.1 | helix-turn-helix domain-containing protein | - |
| C7A99_RS26615 () | 15498..16133 | + | 636 | WP_027662196.1 | hypothetical protein | - |
| C7A99_RS26620 () | 16168..17310 | - | 1143 | WP_107236360.1 | ORF6N domain-containing protein | - |
| C7A99_RS26625 () | 17307..17498 | - | 192 | WP_000183351.1 | hypothetical protein | - |
| C7A99_RS26630 () | 17609..17803 | - | 195 | WP_157836022.1 | ash family protein | - |
| C7A99_RS26635 () | 18608..18856 | - | 249 | WP_000730008.1 | hypothetical protein | - |
| C7A99_RS26640 () | 18900..19553 | - | 654 | WP_000156167.1 | ParA family protein | - |
| C7A99_RS26645 () | 19703..20077 | - | 375 | WP_000418975.1 | hypothetical protein | - |
| C7A99_RS26650 () | 20170..20832 | - | 663 | WP_000839974.1 | helix-turn-helix domain-containing protein | - |
| C7A99_RS26655 () | 21005..21499 | + | 495 | WP_000143878.1 | hypothetical protein | - |
| C7A99_RS26660 () | 21496..22011 | + | 516 | WP_080855625.1 | hypothetical protein | - |
| C7A99_RS26665 () | 22008..22241 | + | 234 | WP_000017467.1 | hypothetical protein | - |
| C7A99_RS26670 () | 22241..22645 | + | 405 | WP_089586989.1 | hypothetical protein | - |
| C7A99_RS26675 () | 22642..22974 | + | 333 | WP_001270825.1 | DUF1064 domain-containing protein | - |
| C7A99_RS26680 () | 22978..23355 | + | 378 | WP_001250512.1 | hypothetical protein | - |
| C7A99_RS26685 () | 23526..24593 | + | 1068 | WP_001041905.1 | DUF3560 domain-containing protein | - |
| C7A99_RS26690 () | 24671..24952 | + | 282 | WP_000823235.1 | hypothetical protein | - |
| C7A99_RS26695 () | 24949..25314 | + | 366 | WP_004105278.1 | hypothetical protein | - |
| C7A99_RS26700 () | 25344..25502 | + | 159 | WP_001706266.1 | hypothetical protein | - |
| C7A99_RS26705 () | 25499..26182 | + | 684 | WP_107236361.1 | hypothetical protein | - |
| C7A99_RS26710 () | 26185..26526 | + | 342 | WP_042094916.1 | hypothetical protein | - |
| C7A99_RS26715 () | 26528..27211 | + | 684 | WP_107236366.1 | ead/Ea22-like family protein | - |
| C7A99_RS26720 () | 27321..27506 | + | 186 | Protein_42 | hypothetical protein | - |
| C7A99_RS26725 () | 27917..28312 | + | 396 | WP_001271967.1 | phage holin family protein | - |
| C7A99_RS26730 () | 28299..28595 | + | 297 | WP_000254764.1 | phage holin family protein | - |
| C7A99_RS26735 () | 28579..29124 | + | 546 | WP_024180651.1 | glycoside hydrolase family 108 protein | - |
| C7A99_RS26740 () | 29121..29399 | + | 279 | WP_000147213.1 | hypothetical protein | - |
| C7A99_RS26750 () | 30077..30664 | + | 588 | WP_000387271.1 | hypothetical protein | - |
| C7A99_RS26755 () | 30776..31045 | + | 270 | WP_000867916.1 | hypothetical protein | - |
| C7A99_RS26760 () | 31045..31242 | + | 198 | WP_001222808.1 | hypothetical protein | - |
| C7A99_RS26765 () | 31317..31616 | + | 300 | WP_044326186.1 | hypothetical protein | - |
| C7A99_RS27735 () | 31803..31955 | + | 153 | WP_170939178.1 | hypothetical protein | - |
| C7A99_RS26775 () | 32042..32449 | + | 408 | WP_025667980.1 | DUF2513 domain-containing protein | - |
| C7A99_RS26780 () | 32741..33364 | + | 624 | WP_000160645.1 | ParB/Srx family N-terminal domain-containing protein | - |
| C7A99_RS26785 () | 33364..34737 | + | 1374 | WP_107236362.1 | ParB N-terminal domain-containing protein | - |
| C7A99_RS26790 () | 34778..35473 | + | 696 | WP_001705017.1 | hypothetical protein | - |
| C7A99_RS26795 () | 36031..36621 | + | 591 | WP_001185429.1 | ParB/Srx family N-terminal domain-containing protein | - |
| C7A99_RS26800 () | 36621..37172 | + | 552 | WP_001019009.1 | hypothetical protein | - |
| C7A99_RS26805 () | 37178..39034 | + | 1857 | WP_042095056.1 | phage terminase large subunit family protein | - |
| C7A99_RS26810 () | 39046..39285 | + | 240 | WP_001058287.1 | hypothetical protein | - |
| C7A99_RS26815 () | 39282..40856 | + | 1575 | WP_001022885.1 | phage portal protein | - |
| C7A99_RS26820 () | 40849..41913 | + | 1065 | WP_199852833.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| C7A99_RS26825 () | 41923..42306 | + | 384 | WP_001209256.1 | hypothetical protein | - |
| C7A99_RS26830 () | 42327..43370 | + | 1044 | WP_001132883.1 | major capsid protein | - |
| C7A99_RS26835 () | 43371..43763 | + | 393 | WP_000113177.1 | hypothetical protein | - |
| C7A99_RS26840 () | 43763..44107 | + | 345 | WP_001083981.1 | hypothetical protein | - |
| C7A99_RS26845 () | 44104..44589 | + | 486 | WP_042095054.1 | hypothetical protein | - |
| C7A99_RS26850 () | 44590..44880 | + | 291 | WP_107236364.1 | hypothetical protein | - |
| C7A99_RS26855 () | 44880..46343 | + | 1464 | WP_107236365.1 | phage tail protein | - |
| C7A99_RS26860 () | 46360..46881 | + | 522 | WP_000070729.1 | phage major tail tube protein | - |
| C7A99_RS26865 () | 46891..47172 | + | 282 | WP_000450805.1 | phage tail assembly protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|