MGE detailed information
MGE type: Prophage MGE length: 39376 bp
Accession: NZ_CP028192 Location: 2636138..2675513 Organism: Escherichia coli strain CFSAN018748 Replicon: chromosome
Accession: NZ_CP028192 Location: 2636138..2675513 Organism: Escherichia coli strain CFSAN018748 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7A99_RS13640 () | 2631403..2632143 | + | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| C7A99_RS13645 () | 2632178..2632699 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| C7A99_RS13650 () | 2632701..2633303 | - | 603 | WP_001024929.1 | YebB family permuted papain-like enzyme | - |
| C7A99_RS13655 () | 2633374..2633439 | + | 66 | WP_072093883.1 | stress response small protein YobI | - |
| C7A99_RS13660 () | 2633578..2634189 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| C7A99_RS13665 () | 2634198..2635208 | + | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| C7A99_RS13670 () | 2635356..2636141 | - | 786 | WP_000571471.1 | zinc ABC transporter permease subunit ZnuB | - |
| C7A99_RS13675 () | 2636138..2636893 | - | 756 | WP_000202996.1 | zinc ABC transporter ATP-binding protein ZnuC | - |
| C7A99_RS13680 () | 2636972..2637904 | + | 933 | WP_001376899.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| C7A99_RS13685 () | 2637920..2639242 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| C7A99_RS13690 () | 2639362..2640333 | + | 972 | WP_000448381.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| C7A99_RS13695 () | 2640465..2641907 | - | 1443 | WP_107235875.1 | pyruvate kinase | - |
| C7A99_RS13700 () | 2642035..2642904 | - | 870 | WP_032353151.1 | DNA-binding transcriptional regulator HexR | - |
| C7A99_RS13705 () | 2643242..2644717 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| C7A99_RS13710 () | 2644952..2646763 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| C7A99_RS13715 () | 2646800..2647441 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| C7A99_RS13720 () | 2647496..2648674 | - | 1179 | WP_107235876.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| C7A99_RS13725 () | 2648808..2649098 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| C7A99_RS13730 () | 2649165..2649521 | + | 357 | WP_001295500.1 | protein YebF | - |
| C7A99_RS13735 () | 2649848..2650507 | + | 660 | WP_063086343.1 | tellurite resistance TerB family protein | - |
| C7A99_RS13740 () | 2650671..2651840 | - | 1170 | WP_000942662.1 | transposase | - |
| C7A99_RS13745 () | 2651897..2652322 | + | 426 | WP_000064873.1 | IS200/IS605-like element ISEc46 family transposase | - |
| C7A99_RS13755 () | 2652479..2654539 | + | 2061 | WP_107235877.1 | oligopeptidase B | - |
| C7A99_RS13760 () | 2654536..2655198 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| C7A99_RS13765 () | 2655222..2655878 | - | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein | - |
| C7A99_RS13770 () | 2655979..2656209 | - | 231 | WP_107235878.1 | DNA polymerase III subunit theta | - |
| C7A99_RS13775 () | 2656348..2656722 | + | 375 | WP_001578488.1 | CopC domain-containing protein YobA | - |
| C7A99_RS13780 () | 2656726..2657598 | + | 873 | WP_107235879.1 | copper homeostasis membrane protein CopD | - |
| C7A99_RS13785 () | 2657611..2657952 | + | 342 | WP_000976481.1 | YebY family protein | - |
| C7A99_RS13790 () | 2658088..2658546 | - | 459 | WP_159042828.1 | IS200/IS605 family transposase | - |
| - () | 2658691..2658962 | - | 272 | - | - | Antitoxin Detail |
| - () | 2658821..2658924 | + | 104 | - | - | Toxin Detail |
| C7A99_RS13800 () | 2659059..2659715 | + | 657 | WP_000812713.1 | protein-serine/threonine phosphatase | - |
| C7A99_RS13805 () | 2659716..2659907 | - | 192 | WP_001296140.1 | YebW family protein | - |
| C7A99_RS13810 () | 2660012..2660248 | - | 237 | WP_105273509.1 | DUF1480 family protein | - |
| C7A99_RS13815 () | 2660366..2661805 | - | 1440 | WP_107236327.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| C7A99_RS13820 () | 2661885..2664518 | - | 2634 | WP_001306757.1 | lipid-binding membrane homeostasis protein YebT | - |
| C7A99_RS13825 () | 2664487..2665770 | - | 1284 | WP_001328843.1 | membrane integrity lipid transport subunit YebS | - |
| C7A99_RS13830 () | 2665900..2666397 | + | 498 | WP_024193251.1 | L-methionine (R)-S-oxide reductase | - |
| C7A99_RS13835 () | 2666494..2667192 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| C7A99_RS13840 () | 2667212..2669260 | + | 2049 | WP_107235882.1 | carboxy terminal-processing peptidase | - |
| C7A99_RS13850 () | 2669440..2669898 | + | 459 | WP_000526135.1 | IS200/IS605 family transposase | - |
| C7A99_RS13855 () | 2670163..2671044 | + | 882 | WP_107235883.1 | protease HtpX | - |
| C7A99_RS13860 () | 2671090..2672463 | - | 1374 | WP_107235884.1 | MFS transporter | - |
| C7A99_RS13865 () | 2672640..2673431 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| C7A99_RS13870 () | 2673575..2673814 | - | 240 | WP_107235885.1 | hypothetical protein | - |
| C7A99_RS13875 () | 2673973..2674116 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| C7A99_RS13880 () | 2674191..2674478 | + | 288 | WP_001006866.1 | YebO family protein | - |
| C7A99_RS13890 () | 2675148..2675291 | + | 144 | WP_001295496.1 | YobF family protein | - |
| C7A99_RS13895 () | 2675304..2675513 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| C7A99_RS13900 () | 2675679..2676488 | + | 810 | WP_000010122.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| C7A99_RS13905 () | 2676485..2677051 | - | 567 | WP_107235886.1 | manganese efflux pump MntP | - |
| C7A99_RS13915 () | 2677480..2677938 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| C7A99_RS13920 () | 2677993..2678844 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| C7A99_RS13925 () | 2678857..2679657 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|