MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 30303 bp
Accession: NZ_CP028188 Location: 1..30303 Organism: Campylobacter coli strain CFSAN054106 Replicon: plasmid pGMI16-001
Accession: NZ_CP028188 Location: 1..30303 Organism: Campylobacter coli strain CFSAN054106 Replicon: plasmid pGMI16-001
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9J81_RS10095 () | 286..729 | - | 444 | WP_002779806.1 | hypothetical protein | - |
| C9J81_RS10100 () | 726..1886 | - | 1161 | WP_208617261.1 | P-type conjugative transfer protein TrbG | - |
| C9J81_RS10105 () | 1897..2592 | - | 696 | WP_002790743.1 | conjugal transfer protein TrbF | - |
| C9J81_RS10115 () | 2923..4209 | - | 1287 | WP_079758926.1 | P-type conjugative transfer protein TrbL | - |
| C9J81_RS10120 () | 4094..4363 | - | 270 | WP_023361555.1 | EexN family lipoprotein | - |
| C9J81_RS10125 () | 4411..5205 | - | 795 | WP_057990887.1 | P-type conjugative transfer protein TrbJ | - |
| C9J81_RS10130 () | 5793..6335 | - | 543 | WP_167386813.1 | phage regulatory protein | - |
| C9J81_RS10135 () | 6344..6784 | - | 441 | WP_107128232.1 | Rha family transcriptional regulator | - |
| C9J81_RS10140 () | 6796..7407 | - | 612 | WP_107128244.1 | conjugal transfer protein TrbM | - |
| C9J81_RS10510 () | 7387..7662 | - | 276 | Protein_10 | type IV secretion system protein | - |
| C9J81_RS10145 () | 7659..8243 | - | 585 | WP_045243730.1 | Rha family transcriptional regulator | - |
| C9J81_RS10150 () | 8240..10705 | - | 2466 | WP_107128233.1 | conjugal transfer protein TrbE | - |
| C9J81_RS10155 () | 10709..10996 | - | 288 | WP_002779817.1 | VirB3 family type IV secretion system protein | - |
| C9J81_RS10160 () | 10996..11292 | - | 297 | WP_002784998.1 | TrbC/VirB2 family protein | - |
| C9J81_RS10165 () | 11302..12240 | - | 939 | WP_107128234.1 | Type IV secretion system protein PtlH | VF |
| C9J81_RS10170 () | 12702..13148 | - | 447 | WP_164675258.1 | IS200-IS605 family transposase IS605 | Transposase |
| C9J81_RS10175 () | 13192..14391 | + | 1200 | WP_002781047.1 | IS200-IS605 family transposase IS605 | Transposase |
| C9J81_RS10180 () | 14443..14856 | - | 414 | WP_070253411.1 | type II toxin-antitoxin system VapC family toxin | - |
| C9J81_RS10185 () | 14853..15767 | - | 915 | WP_002791548.1 | hypothetical protein | - |
| C9J81_RS10195 () | 16678..17007 | - | 330 | WP_107128235.1 | hypothetical protein | - |
| C9J81_RS10200 () | 17020..17475 | - | 456 | WP_072232418.1 | GNAT family N-acetyltransferase | - |
| C9J81_RS10205 () | 17686..18069 | + | 384 | WP_002797386.1 | DNA transfer protein | - |
| C9J81_RS10210 () | 18032..20188 | + | 2157 | WP_107128236.1 | Protein TraI | Relaxase |
| C9J81_RS10220 () | 20429..20653 | - | 225 | WP_107128237.1 | hypothetical protein | - |
| C9J81_RS10225 () | 20656..21342 | - | 687 | WP_002782958.1 | Protein virC1 | VF |
| C9J81_RS10230 () | 21434..21829 | - | 396 | WP_107128238.1 | conjugal transfer protein TraM | - |
| C9J81_RS10235 () | 21894..22361 | - | 468 | WP_107128239.1 | hypothetical protein | VF |
| C9J81_RS10240 () | 22366..23049 | - | 684 | WP_045243721.1 | Fic family protein | Toxin Detail |
| C9J81_RS10245 () | 23042..23284 | - | 243 | WP_002804094.1 | hypothetical protein | Antitoxin Detail |
| C9J81_RS10250 () | 23375..24094 | - | 720 | WP_002784845.1 | conjugal transfer protein TraL | - |
| C9J81_RS10255 () | 24111..25934 | - | 1824 | WP_107128240.1 | Conjugal transfer protein TraG | VF |
| C9J81_RS10260 () | 25931..28141 | - | 2211 | WP_107128241.1 | DUF1738 domain-containing protein | - |
| C9J81_RS10460 () | 28146..28286 | - | 141 | WP_167386812.1 | hypothetical protein | - |
| C9J81_RS10265 () | 28273..28635 | - | 363 | WP_002844661.1 | single-stranded DNA-binding protein | - |
| C9J81_RS10270 () | 28625..29179 | - | 555 | WP_107128242.1 | transglycosylase SLT domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|