MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 62214 bp
Accession: NZ_CP028184 Location: 1..62214 Organism: Listeria monocytogenes strain CFSAN054109 Replicon: plasmid pGMI16-004
Accession: NZ_CP028184 Location: 1..62214 Organism: Listeria monocytogenes strain CFSAN054109 Replicon: plasmid pGMI16-004
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9J84_RS15800 () | 909..1424 | + | 516 | Protein_1 | hypothetical protein | - |
| C9J84_RS15805 () | 1482..1673 | + | 192 | WP_012952148.1 | hypothetical protein | - |
| C9J84_RS15810 () | 1680..2066 | + | 387 | WP_031669346.1 | hypothetical protein | - |
| C9J84_RS15815 () | 2082..3341 | + | 1260 | WP_077418284.1 | CpaF/VirB11 family protein | - |
| C9J84_RS15820 () | 3313..4125 | + | 813 | WP_031669342.1 | hypothetical protein | - |
| C9J84_RS15825 () | 4125..4898 | + | 774 | WP_009912433.1 | hypothetical protein | - |
| C9J84_RS15830 () | 4899..5255 | + | 357 | WP_012952153.1 | hypothetical protein | - |
| C9J84_RS15835 () | 5651..5893 | + | 243 | WP_009911416.1 | hypothetical protein | - |
| C9J84_RS15840 () | 5947..6150 | + | 204 | WP_012952155.1 | hypothetical protein | - |
| C9J84_RS15845 () | 6167..6805 | + | 639 | WP_031669339.1 | hypothetical protein | - |
| C9J84_RS15850 () | 6817..7320 | + | 504 | WP_031669337.1 | DUF669 domain-containing protein | - |
| C9J84_RS15855 () | 7418..7603 | + | 186 | WP_009911422.1 | hypothetical protein | - |
| C9J84_RS15860 () | 7627..7914 | + | 288 | WP_012952158.1 | hypothetical protein | - |
| C9J84_RS15865 () | 8000..8701 | + | 702 | WP_072240426.1 | CPBP family intramembrane metalloprotease | - |
| C9J84_RS15870 () | 8722..9294 | + | 573 | WP_031669333.1 | hypothetical protein | - |
| C9J84_RS15875 () | 9311..9589 | + | 279 | WP_126290690.1 | hypothetical protein | - |
| C9J84_RS15880 () | 9602..11746 | + | 2145 | WP_031669330.1 | type IA DNA topoisomerase | - |
| C9J84_RS15885 () | 11807..12940 | + | 1134 | WP_077316146.1 | toprim domain-containing protein | - |
| C9J84_RS15890 () | 12942..15407 | + | 2466 | WP_049955713.1 | type IV secretory system conjugative DNA transfer family protein | - |
| C9J84_RS15895 () | 15404..17770 | + | 2367 | WP_031669324.1 | hypothetical protein | - |
| C9J84_RS15900 () | 17770..18120 | + | 351 | WP_012952165.1 | hypothetical protein | - |
| C9J84_RS15905 () | 18137..18856 | + | 720 | WP_012952166.1 | hypothetical protein | - |
| C9J84_RS15910 () | 18869..20884 | + | 2016 | WP_025370668.1 | hypothetical protein | - |
| C9J84_RS15915 () | 20884..21924 | + | 1041 | WP_049955712.1 | C40 family peptidase | - |
| C9J84_RS15920 () | 22105..22530 | + | 426 | WP_171004012.1 | hypothetical protein | - |
| C9J84_RS15925 () | 22533..23450 | + | 918 | WP_012952170.1 | hypothetical protein | - |
| C9J84_RS15930 () | 23848..24087 | + | 240 | WP_003728492.1 | hypothetical protein | - |
| C9J84_RS15935 () | 24099..24539 | + | 441 | WP_031669320.1 | hypothetical protein | - |
| C9J84_RS15940 () | 24532..25872 | + | 1341 | WP_031641553.1 | hypothetical protein | - |
| C9J84_RS15945 () | 25883..26254 | + | 372 | WP_003728489.1 | hypothetical protein | - |
| C9J84_RS15950 () | 26274..27038 | + | 765 | WP_009917205.1 | Fic family protein | - |
| C9J84_RS15955 () | 27158..27688 | + | 531 | WP_031641557.1 | hypothetical protein | - |
| C9J84_RS15960 () | 27792..28930 | + | 1139 | WP_096832446.1 | IS3 family transposase | - |
| C9J84_RS15965 () | 28994..29329 | - | 336 | WP_003728486.1 | helix-turn-helix domain-containing protein | - |
| C9J84_RS15970 () | 29503..29901 | + | 399 | WP_011011011.1 | hypothetical protein | - |
| C9J84_RS15980 () | 30766..35955 | + | 5190 | WP_126292250.1 | DEAD/DEAH box helicase family protein | - |
| C9J84_RS15985 () | 36125..36376 | + | 252 | WP_049955716.1 | helix-turn-helix transcriptional regulator | - |
| C9J84_RS15990 () | 36380..37351 | + | 972 | WP_031641941.1 | hypothetical protein | - |
| C9J84_RS16120 () | 37405..37548 | + | 144 | WP_157105793.1 | hypothetical protein | - |
| C9J84_RS15995 () | 37574..37915 | - | 342 | WP_003728465.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| C9J84_RS16000 () | 37909..38151 | - | 243 | WP_003728464.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C9J84_RS16005 () | 38212..38463 | - | 252 | WP_003728463.1 | hypothetical protein | - |
| C9J84_RS16010 () | 38594..38920 | + | 327 | WP_031641563.1 | hypothetical protein | - |
| C9J84_RS16015 () | 38920..39582 | + | 663 | WP_003731676.1 | DUF2786 domain-containing protein | - |
| C9J84_RS16020 () | 39601..39978 | + | 378 | WP_003769263.1 | DUF3850 domain-containing protein | - |
| C9J84_RS16025 () | 40137..40625 | + | 489 | WP_031669356.1 | hypothetical protein | - |
| C9J84_RS16030 () | 41228..43405 | + | 2178 | WP_107176699.1 | ATP-binding protein | - |
| C9J84_RS16035 () | 43619..44227 | + | 609 | WP_003728511.1 | recombinase family protein | - |
| C9J84_RS16040 () | 44217..44444 | + | 228 | WP_003728510.1 | hypothetical protein | - |
| C9J84_RS16045 () | 44564..44842 | - | 279 | WP_003731679.1 | hypothetical protein | - |
| C9J84_RS16050 () | 44805..45041 | + | 237 | WP_003728509.1 | helix-turn-helix domain-containing protein | - |
| C9J84_RS16055 () | 45469..47583 | + | 2115 | WP_003728507.1 | ATP-dependent Clp protease ATP-binding subunit | - |
| C9J84_RS16060 () | 47859..49199 | + | 1341 | WP_013315188.1 | IS3 family transposase | - |
| C9J84_RS16065 () | 49374..50108 | + | 735 | WP_003728505.1 | AAA family ATPase | - |
| C9J84_RS16070 () | 50313..50657 | + | 345 | WP_003728504.1 | hypothetical protein | - |
| C9J84_RS16075 () | 50645..51925 | + | 1281 | WP_077418289.1 | Y-family DNA polymerase | - |
| C9J84_RS16080 () | 52298..52630 | - | 333 | WP_003726389.1 | hypothetical protein | - |
| C9J84_RS16085 () | 52623..53468 | - | 846 | WP_026747205.1 | ParA family protein | - |
| C9J84_RS16090 () | 54131..55780 | + | 1650 | WP_012952135.1 | primase C-terminal domain-containing protein | - |
| C9J84_RS16095 () | 56749..59664 | - | 2916 | WP_031669350.1 | Tn3 family transposase | - |
| C9J84_RS16100 () | 59668..60222 | - | 555 | WP_003728468.1 | recombinase family protein | - |
| C9J84_RS16105 () | 60502..60861 | + | 360 | WP_003728467.1 | Cd(II)-sensing metalloregulatory transcriptional repressor CadC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|