MGE detailed information
MGE type: Conjugative plasmid MGE length: 116768 bp
Accession: NZ_CP028177 Location: 1..116768 Organism: Klebsiella pneumoniae strain CFSAN054111 Replicon: plasmid pGMI16-006_1
Accession: NZ_CP028177 Location: 1..116768 Organism: Klebsiella pneumoniae strain CFSAN054111 Replicon: plasmid pGMI16-006_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9J89_RS26380 () | 135..2192 | - | 2058 | WP_015493064.1 | ParB/RepB/Spo0J family partition protein | - |
| C9J89_RS26385 () | 2262..2510 | - | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| C9J89_RS26390 () | 2559..3101 | - | 543 | WP_014343512.1 | single-stranded DNA-binding protein | - |
| C9J89_RS26410 () | 3934..4497 | - | 564 | WP_014343514.1 | methyltransferase | - |
| C9J89_RS26415 () | 4545..5900 | - | 1356 | WP_040120295.1 | DUF3560 domain-containing protein | - |
| C9J89_RS26420 () | 5952..6182 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| C9J89_RS26425 () | 6274..6501 | - | 228 | WP_004152790.1 | hypothetical protein | - |
| C9J89_RS26440 () | 7285..7602 | - | 318 | WP_004118473.1 | hypothetical protein | - |
| C9J89_RS26445 () | 7637..7891 | - | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| C9J89_RS26450 () | 8079..8270 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| C9J89_RS26455 () | 8313..8819 | - | 507 | WP_011977778.1 | antirestriction protein ArdA | - |
| C9J89_RS26460 () | 8862..9290 | - | 429 | WP_023279469.1 | antirestriction protein | - |
| C9J89_RS26465 () | 9970..10737 | - | 768 | WP_013214013.1 | hypothetical protein | - |
| C9J89_RS26470 () | 10791..11210 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| C9J89_RS26475 () | 11220..11441 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| C9J89_RS26480 () | 11441..12142 | - | 702 | WP_004152355.1 | DNA methylase | - |
| C9J89_RS26490 () | 12579..12809 | - | 231 | WP_040245863.1 | hypothetical protein | - |
| C9J89_RS26495 () | 12870..13541 | - | 672 | WP_004152354.1 | plasmid partitioning/stability family protein | - |
| C9J89_RS26500 () | 13544..14515 | - | 972 | WP_032414078.1 | StbA family protein | - |
| C9J89_RS26505 () | 14747..15178 | + | 432 | WP_004152352.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C9J89_RS26510 () | 15178..16449 | + | 1272 | WP_004152351.1 | Y-family DNA polymerase | - |
| C9J89_RS26515 () | 16850..17746 | + | 897 | WP_004152350.1 | RepB family plasmid replication initiator protein | - |
| C9J89_RS26520 () | 18068..19273 | + | 1206 | WP_004152349.1 | Plasmid partition protein A | VF |
| C9J89_RS26525 () | 19270..20244 | + | 975 | WP_004152348.1 | ParB/RepB/Spo0J family partition protein | - |
| C9J89_RS26535 () | 20621..20953 | + | 333 | WP_004152347.1 | hypothetical protein | - |
| C9J89_RS26540 () | 21178..21393 | + | 216 | WP_004227314.1 | hypothetical protein | - |
| C9J89_RS26545 () | 21505..23532 | + | 2028 | WP_004152345.1 | type I restriction-modification system subunit M | - |
| C9J89_RS26550 () | 23529..24845 | + | 1317 | WP_004152344.1 | restriction endonuclease subunit S | - |
| C9J89_RS26555 () | 24846..28103 | + | 3258 | WP_004152343.1 | type I restriction endonuclease subunit R | - |
| C9J89_RS26560 () | 28108..29376 | + | 1269 | WP_004152342.1 | ISL3 family transposase ISKpn25 | Transposase |
| C9J89_RS26565 () | 29496..29969 | + | 474 | WP_004152341.1 | YkgJ family cysteine cluster protein | - |
| C9J89_RS26575 () | 31183..31965 | - | 783 | WP_004152340.1 | site-specific integrase | - |
| C9J89_RS26580 () | 31965..32297 | - | 333 | WP_004152339.1 | hypothetical protein | - |
| C9J89_RS26585 () | 32304..32702 | - | 399 | WP_004171440.1 | hypothetical protein | - |
| C9J89_RS26590 () | 32728..33057 | - | 330 | WP_004152337.1 | hypothetical protein | - |
| C9J89_RS26595 () | 33085..33393 | - | 309 | WP_004152336.1 | hypothetical protein | - |
| C9J89_RS28615 () | 33880..34341 | - | 462 | WP_199852547.1 | hypothetical protein | - |
| C9J89_RS26610 () | 34298..34528 | + | 231 | WP_016338373.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C9J89_RS26615 () | 34525..34941 | + | 417 | WP_107240835.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C9J89_RS26620 () | 34982..35859 | - | 878 | Protein_40 | restriction endonuclease | - |
| C9J89_RS26625 () | 36518..37795 | + | 1278 | WP_016338369.1 | HlyD family secretion protein | - |
| C9J89_RS26630 () | 37785..39893 | + | 2109 | WP_016338368.1 | peptidase domain-containing ABC transporter | - |
| C9J89_RS26635 () | 39893..40528 | + | 636 | WP_016338367.1 | CPBP family intramembrane metalloprotease | - |
| C9J89_RS26640 () | 40636..40980 | - | 345 | WP_058650054.1 | hypothetical protein | - |
| C9J89_RS26650 () | 41547..41810 | + | 264 | WP_009310051.1 | hypothetical protein | - |
| C9J89_RS26660 () | 41875..42579 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C9J89_RS26665 () | 42591..43247 | - | 657 | WP_000113282.1 | Tetracycline repressor protein class D | VF |
| C9J89_RS26670 () | 43343..44527 | + | 1185 | WP_001039466.1 | Tetracycline resistance protein, class B | ARG |
| C9J89_RS26675 () | 44622..44858 | + | 237 | Protein_49 | alcohol dehydrogenase catalytic domain-containing protein | - |
| C9J89_RS26680 () | 45007..45867 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| C9J89_RS26685 () | 46688..48058 | - | 1371 | WP_000971921.1 | IS1182 family transposase ISCfr1 | Transposase |
| C9J89_RS26690 () | 48173..49309 | - | 1137 | WP_000080861.1 | DUF3883 domain-containing protein | - |
| C9J89_RS26695 () | 49360..49587 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| C9J89_RS26700 () | 49611..49802 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| C9J89_RS26705 () | 50284..50826 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| C9J89_RS26710 () | 50839..51699 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| C9J89_RS26715 () | 51881..52741 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| C9J89_RS26720 () | 52924..53241 | - | 318 | Protein_58 | recombinase family protein | - |
| C9J89_RS26725 () | 53441..54265 | - | 825 | Protein_59 | class D beta-lactamase | - |
| C9J89_RS26730 () | 54325..55113 | - | 789 | WP_001206315.1 | Streptomycin 3''-adenylyltransferase | ARG |
| C9J89_RS26735 () | 55183..55737 | - | 555 | WP_063840280.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| C9J89_RS26740 () | 55971..56528 | - | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| C9J89_RS26745 () | 56692..59697 | + | 3006 | WP_011977771.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| C9J89_RS26750 () | 59731..60066 | + | 336 | Protein_64 | IS6 family transposase IS26 | Transposase |
| C9J89_RS26755 () | 60120..60443 | - | 324 | Protein_65 | class II aldolase/adducin family protein | - |
| C9J89_RS26760 () | 60436..61688 | - | 1253 | Protein_66 | four-carbon acid sugar kinase family protein | - |
| C9J89_RS26765 () | 61700..62602 | - | 903 | WP_002903955.1 | NAD(P)-dependent oxidoreductase | - |
| C9J89_RS26775 () | 62864..63625 | + | 762 | WP_002210513.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| C9J89_RS26780 () | 63646..64506 | - | 861 | WP_002904004.1 | Beta-lactamase SHV-2 | ARG |
| C9J89_RS26790 () | 64643..65347 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C9J89_RS28140 () | 65389..65499 | + | 111 | Protein_71 | Rpn family recombination-promoting nuclease/putative transposase | - |
| C9J89_RS26795 () | 65496..66107 | - | 612 | WP_016338366.1 | DUF2913 family protein | - |
| C9J89_RS26800 () | 66161..66442 | - | 282 | WP_001568067.1 | hypothetical protein | - |
| C9J89_RS26805 () | 66615..66950 | + | 336 | WP_011977766.1 | C2H2-type zinc finger protein | - |
| C9J89_RS26815 () | 67994..68851 | - | 858 | WP_004152386.1 | incFII family plasmid replication initiator RepA | - |
| C9J89_RS26820 () | 68844..68921 | - | 78 | WP_004171450.1 | RepA leader peptide Tap | - |
| C9J89_RS26825 () | 69153..69422 | - | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| C9J89_RS26830 () | 69540..70019 | - | 480 | WP_014343478.1 | Phospholipase D | VF |
| C9J89_RS26835 () | 70195..70503 | - | 309 | WP_004152383.1 | hypothetical protein | - |
| C9J89_RS26840 () | 70500..71150 | - | 651 | WP_004152382.1 | DUF2726 domain-containing protein | - |
| C9J89_RS26845 () | 71206..71850 | - | 645 | WP_004153014.1 | hypothetical protein | - |
| C9J89_RS26850 () | 71900..72502 | - | 603 | WP_015060010.1 | hypothetical protein | - |
| C9J89_RS26855 () | 72663..73256 | - | 594 | WP_004152380.1 | fertility inhibition protein FinO | - |
| C9J89_RS26860 () | 73328..74053 | - | 726 | WP_004152379.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| C9J89_RS26865 () | 74134..79395 | - | 5262 | WP_107240836.1 | Multifunctional conjugation protein TraI | Relaxase |
| C9J89_RS26870 () | 79395..81707 | - | 2313 | Protein_86 | type IV conjugative transfer system coupling protein TraD | - |
| C9J89_RS28620 () | 81836..82525 | - | 690 | WP_004198206.1 | hypothetical protein | - |
| C9J89_RS26880 () | 82717..83448 | - | 732 | WP_004152622.1 | complement resistance protein TraT | - |
| C9J89_RS26885 () | 83632..84180 | - | 549 | WP_004152623.1 | conjugal transfer entry exclusion protein TraS | - |
| C9J89_RS26890 () | 84193..87042 | - | 2850 | WP_107240837.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C9J89_RS26895 () | 87042..88421 | - | 1380 | WP_011977731.1 | conjugal transfer protein TraH | - |
| C9J89_RS26900 () | 88399..88842 | - | 444 | WP_004152679.1 | F-type conjugal transfer protein TrbF | - |
| C9J89_RS26905 () | 88888..89445 | - | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C9J89_RS26910 () | 89417..89656 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C9J89_RS26915 () | 89667..90419 | - | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C9J89_RS26920 () | 90440..90766 | - | 327 | WP_004152676.1 | hypothetical protein | - |
| C9J89_RS26925 () | 90779..91027 | - | 249 | WP_004152675.1 | hypothetical protein | - |
| C9J89_RS26930 () | 91005..91259 | - | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| C9J89_RS26935 () | 91291..93246 | - | 1956 | WP_004152673.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C9J89_RS26940 () | 93305..93943 | - | 639 | WP_011977786.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C9J89_RS26945 () | 93956..94945 | - | 990 | WP_011977785.1 | conjugal transfer pilus assembly protein TraU | - |
| C9J89_RS26950 () | 94942..95331 | - | 390 | WP_004152508.1 | hypothetical protein | - |
| C9J89_RS26955 () | 95373..95999 | - | 627 | WP_107240838.1 | type-F conjugative transfer system protein TraW | - |
| C9J89_RS26960 () | 95999..96388 | - | 390 | WP_013214025.1 | type-F conjugative transfer system protein TrbI | - |
| C9J89_RS26965 () | 96388..99027 | - | 2640 | WP_032431388.1 | type IV secretion system protein TraC | - |
| C9J89_RS26970 () | 99099..99497 | - | 399 | WP_011977783.1 | hypothetical protein | - |
| C9J89_RS26975 () | 99505..99894 | - | 390 | WP_004153076.1 | hypothetical protein | - |
| C9J89_RS26980 () | 99937..100341 | - | 405 | WP_004152503.1 | hypothetical protein | - |
| C9J89_RS26985 () | 100408..100719 | - | 312 | WP_004152502.1 | hypothetical protein | - |
| C9J89_RS26990 () | 100720..100938 | - | 219 | WP_004152501.1 | hypothetical protein | - |
| C9J89_RS26995 () | 101044..101454 | - | 411 | WP_004152499.1 | hypothetical protein | - |
| C9J89_RS27000 () | 101586..102170 | - | 585 | WP_004161368.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C9J89_RS27005 () | 102284..103708 | - | 1425 | WP_004155033.1 | conjugal transfer protein TraB | - |
| C9J89_RS27010 () | 103708..104448 | - | 741 | WP_004152497.1 | type-F conjugative transfer system secretin TraK | - |
| C9J89_RS27015 () | 104435..105001 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| C9J89_RS27020 () | 105021..105326 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| C9J89_RS27025 () | 105340..105708 | - | 369 | WP_004152496.1 | type IV conjugative transfer system pilin TraA | - |
| C9J89_RS27030 () | 105762..106148 | - | 387 | WP_004152495.1 | TraY domain-containing protein | - |
| C9J89_RS27035 () | 106227..106913 | - | 687 | WP_004152494.1 | transcriptional regulator TraJ family protein | - |
| C9J89_RS27040 () | 107087..107485 | - | 399 | WP_004152493.1 | relaxosome protein TraM | - |
| C9J89_RS27045 () | 107907..108392 | + | 486 | WP_014343495.1 | hypothetical protein | VF |
| C9J89_RS27050 () | 108425..108754 | - | 330 | WP_013214015.1 | hypothetical protein | - |
| C9J89_RS27055 () | 108787..109608 | - | 822 | WP_004152492.1 | DUF945 domain-containing protein | - |
| C9J89_RS27080 () | 110545..110823 | - | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| C9J89_RS27085 () | 110813..111133 | - | 321 | WP_014343498.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C9J89_RS27090 () | 111214..111438 | - | 225 | WP_014343499.1 | hypothetical protein | - |
| C9J89_RS27095 () | 111449..111661 | - | 213 | WP_014343500.1 | hypothetical protein | - |
| C9J89_RS27100 () | 111722..112078 | - | 357 | WP_014343501.1 | hypothetical protein | - |
| C9J89_RS27110 () | 112919..113236 | - | 318 | WP_014343505.1 | hypothetical protein | - |
| C9J89_RS27115 () | 113251..113601 | - | 351 | WP_040245917.1 | hypothetical protein | - |
| C9J89_RS27120 () | 113598..113870 | - | 273 | WP_040245921.1 | hypothetical protein | - |
| C9J89_RS27125 () | 114563..114721 | - | 159 | WP_014343509.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9J89_RS27135 () | 114949..115323 | - | 375 | WP_001568060.1 | hypothetical protein | - |
| C9J89_RS27140 () | 115379..115705 | - | 327 | WP_013023807.1 | hypothetical protein | - |
| C9J89_RS27145 () | 115702..116430 | - | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|