MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33310 bp
Accession: NZ_CP028174 Location: 1..33310 Organism: Salmonella enterica strain CFSAN064033 Replicon: plasmid pGMI17-001_2
Accession: NZ_CP028174 Location: 1..33310 Organism: Salmonella enterica strain CFSAN064033 Replicon: plasmid pGMI17-001_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6649_RS23885 () | 23..238 | - | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| C6649_RS23890 () | 235..528 | - | 294 | WP_060598542.1 | LuxR family transcriptional regulator | - |
| C6649_RS23895 () | 605..1834 | - | 1230 | WP_001329504.1 | relaxase/mobilization nuclease domain-containing protein | - |
| C6649_RS23900 () | 1838..2341 | - | 504 | WP_000781813.1 | hypothetical protein | - |
| C6649_RS23910 () | 2702..3049 | - | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| C6649_RS23915 () | 3046..3294 | - | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C6649_RS23920 () | 3599..3949 | - | 351 | WP_000854259.1 | hypothetical protein | - |
| C6649_RS23925 () | 4040..4339 | - | 300 | WP_000650309.1 | hypothetical protein | - |
| C6649_RS23935 () | 4793..5020 | - | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| C6649_RS23940 () | 5007..5258 | - | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| C6649_RS23945 () | 5255..5797 | - | 543 | WP_001083906.1 | hypothetical protein | - |
| C6649_RS24245 () | 5902..6417 | - | 516 | WP_001025395.1 | J domain-containing protein | - |
| C6649_RS23955 () | 7832..8698 | + | 867 | WP_001353743.1 | replication initiation protein | - |
| C6649_RS23960 () | 8711..9115 | + | 405 | WP_012421203.1 | hypothetical protein | - |
| C6649_RS23965 () | 9250..9777 | + | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| C6649_RS23975 () | 10169..10891 | - | 723 | WP_039003037.1 | PAP2 family protein | - |
| C6649_RS23980 () | 10963..12588 | - | 1626 | WP_049589868.1 | phosphoethanolamine--lipid A transferase MCR-1.1 | - |
| C6649_RS23985 () | 12768..13391 | - | 624 | Protein_17 | DUF2806 domain-containing protein | - |
| C6649_RS23995 () | 13552..13821 | - | 270 | WP_001086090.1 | hypothetical protein | - |
| C6649_RS24000 () | 13896..14543 | - | 648 | WP_000587671.1 | P-loop NTPase | - |
| C6649_RS24020 () | 16084..16788 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| C6649_RS24025 () | 16875..17339 | - | 465 | WP_001293134.1 | H-NS histone family protein | - |
| C6649_RS24030 () | 17357..17563 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| C6649_RS24035 () | 17560..19713 | - | 2154 | WP_001235745.1 | type IA DNA topoisomerase | - |
| C6649_RS24040 () | 19718..20290 | - | 573 | WP_001198960.1 | hypothetical protein | - |
| C6649_RS24290 () | 20294..20440 | - | 147 | WP_000382583.1 | hypothetical protein | - |
| C6649_RS24045 () | 20601..20906 | - | 306 | WP_001350475.1 | putative conjugal transfer protein | - |
| C6649_RS24050 () | 20890..21309 | - | 420 | WP_000737411.1 | hypothetical protein | - |
| C6649_RS24055 () | 21321..23183 | - | 1863 | WP_170324155.1 | type IV secretory system conjugative DNA transfer family protein | - |
| C6649_RS24060 () | 23170..24198 | - | 1029 | WP_000017226.1 | P-type DNA transfer ATPase VirB11 | - |
| C6649_RS24065 () | 24200..25318 | - | 1119 | WP_000131271.1 | TrbI/VirB10 family protein | - |
| C6649_RS24070 () | 25311..26219 | - | 909 | WP_001329500.1 | P-type conjugative transfer protein VirB9 | - |
| C6649_RS24075 () | 26216..26902 | - | 687 | WP_001290765.1 | type IV secretion system protein | - |
| C6649_RS24095 () | 27417..28511 | - | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| C6649_RS24100 () | 28523..29239 | - | 717 | WP_000832283.1 | type IV secretion system VirB5 protein | - |
| C6649_RS24105 () | 29251..31998 | - | 2748 | WP_000105985.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| C6649_RS24110 () | 32017..32289 | - | 273 | WP_001328551.1 | TrbC/VirB2 family protein | - |
| C6649_RS24115 () | 32357..32977 | - | 621 | WP_000157549.1 | lytic transglycosylase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|