MGE detailed information
MGE type: Prophage MGE length: 51201 bp
Accession: NZ_CP028166 Location: 784148..835348 Organism: Escherichia coli strain CFSAN064036 Replicon: chromosome
Accession: NZ_CP028166 Location: 784148..835348 Organism: Escherichia coli strain CFSAN064036 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6668_RS04200 () | 780663..781409 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| C6668_RS04205 () | 781498..782184 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C6668_RS04210 () | 782361..782564 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C6668_RS04215 () | 782599..784059 | - | 1461 | WP_107147881.1 | mannitol dehydrogenase family protein | - |
| C6668_RS04220 () | 784148..785431 | - | 1284 | Protein_785 | MHS family MFS transporter YdfJ | - |
| C6668_RS26165 () | 786036..786149 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| C6668_RS04225 () | 786218..786451 | + | 234 | WP_107147882.1 | cold shock protein YdfK | - |
| C6668_RS04230 () | 786768..787358 | + | 591 | WP_032187390.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| C6668_RS04235 () | 787456..788031 | - | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| C6668_RS04240 () | 788031..791054 | - | 3024 | WP_107147883.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C6668_RS04245 () | 791119..791718 | - | 600 | WP_001230352.1 | hypothetical protein | VF |
| C6668_RS04250 () | 791785..795183 | - | 3399 | WP_107147884.1 | host specificity protein J | - |
| C6668_RS04255 () | 795244..795876 | - | 633 | WP_000090891.1 | tail assembly protein | - |
| C6668_RS04260 () | 795813..796556 | - | 744 | WP_089587466.1 | C40 family peptidase | - |
| C6668_RS04265 () | 796562..797260 | - | 699 | WP_001152624.1 | phage minor tail protein L | - |
| C6668_RS04270 () | 797260..797589 | - | 330 | WP_000847331.1 | phage tail protein | - |
| C6668_RS04275 () | 797586..800165 | - | 2580 | WP_000840337.1 | phage tail tape measure protein | - |
| C6668_RS04280 () | 800158..800592 | - | 435 | WP_000459471.1 | phage tail assembly protein T | - |
| C6668_RS04285 () | 800574..800996 | - | 423 | WP_000479135.1 | phage minor tail protein G | - |
| C6668_RS04290 () | 801012..801752 | - | 741 | WP_001543784.1 | phage tail protein | - |
| C6668_RS04295 () | 801760..802155 | - | 396 | WP_107147885.1 | phage minor tail U family protein | - |
| C6668_RS04300 () | 802152..802730 | - | 579 | WP_107147886.1 | phage tail protein | - |
| C6668_RS04305 () | 802742..803095 | - | 354 | WP_021514936.1 | head-tail joining protein | - |
| C6668_RS04310 () | 803107..803502 | - | 396 | WP_107147887.1 | DNA-packaging protein FI | - |
| C6668_RS04315 () | 803544..804569 | - | 1026 | WP_107147888.1 | major capsid protein | - |
| C6668_RS04320 () | 804625..804957 | - | 333 | WP_001299443.1 | head decoration protein | - |
| C6668_RS04325 () | 804967..806286 | - | 1320 | WP_000123317.1 | S49 family peptidase | - |
| C6668_RS04330 () | 806267..807868 | - | 1602 | WP_001345555.1 | phage portal protein | - |
| C6668_RS04335 () | 807865..808071 | - | 207 | WP_000198149.1 | gpW family protein | - |
| C6668_RS04340 () | 808068..809993 | - | 1926 | WP_001027297.1 | phage terminase large subunit family protein | - |
| C6668_RS04345 () | 809968..810513 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| C6668_RS04355 () | 810902..811135 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| C6668_RS04360 () | 811193..811603 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| C6668_RS04365 () | 811755..811928 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| C6668_RS04370 () | 812100..812255 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| C6668_RS26170 () | 812334..812399 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| C6668_RS04375 () | 812402..812590 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| C6668_RS04380 () | 812601..812813 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| C6668_RS04385 () | 813175..813672 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| C6668_RS04390 () | 813669..814202 | - | 534 | WP_001515369.1 | lysozyme | - |
| C6668_RS04395 () | 814258..814572 | - | 315 | WP_001515370.1 | YdfR family protein | - |
| C6668_RS04400 () | 814577..814792 | - | 216 | WP_001515371.1 | phage lysis protein EssD | - |
| C6668_RS04405 () | 814983..815696 | - | 714 | WP_001146314.1 | Hydrogenase/urease maturation factor HypA | VF |
| C6668_RS04415 () | 816103..816261 | - | 159 | Protein_824 | DUF1722 domain-containing protein | - |
| C6668_RS04420 () | 816326..817488 | + | 1163 | WP_085947598.1 | IS3 family transposase ISEc17 | Transposase |
| C6668_RS04425 () | 817511..818323 | - | 813 | Protein_826 | DUF523 and DUF1722 domain-containing protein | - |
| C6668_RS04430 () | 818516..819040 | + | 525 | WP_000780584.1 | lipocalin family protein | - |
| C6668_RS04435 () | 819196..819573 | - | 378 | WP_001204787.1 | antitermination protein | - |
| C6668_RS04440 () | 819591..820640 | - | 1050 | WP_032187401.1 | DUF968 domain-containing protein | - |
| C6668_RS04445 () | 820642..820920 | - | 279 | WP_001515373.1 | hypothetical protein | - |
| C6668_RS04450 () | 820987..821238 | - | 252 | WP_001463433.1 | hypothetical protein | - |
| C6668_RS04455 () | 821455..821610 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C6668_RS04460 () | 821682..821969 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C6668_RS04465 () | 821969..822208 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C6668_RS04470 () | 822233..822538 | + | 306 | WP_072134164.1 | hypothetical protein | - |
| C6668_RS04475 () | 822741..823073 | + | 333 | WP_001301033.1 | protein FlxA | - |
| C6668_RS04485 () | 823510..824850 | - | 1341 | WP_000589013.1 | ISNCY family transposase ISCARN112 | Transposase |
| C6668_RS26360 () | 825619..825904 | - | 286 | Protein_838 | hypothetical protein | - |
| C6668_RS26365 () | 826070..826252 | - | 183 | Protein_839 | hypothetical protein | - |
| C6668_RS04505 () | 826515..826871 | - | 357 | WP_001315552.1 | class I SAM-dependent methyltransferase | - |
| C6668_RS04510 () | 826868..827290 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| C6668_RS04515 () | 827331..828296 | - | 966 | WP_073544560.1 | hypothetical protein | - |
| C6668_RS04520 () | 828277..828798 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| C6668_RS04525 () | 828782..829009 | - | 228 | WP_000921596.1 | transcriptional regulator | - |
| C6668_RS04530 () | 829091..829498 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| C6668_RS04535 () | 829667..829822 | + | 156 | WP_000379588.1 | DUF1391 family protein | - |
| C6668_RS04545 () | 829982..830200 | + | 219 | WP_001171952.1 | hypothetical protein | - |
| C6668_RS04555 () | 830768..830956 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| C6668_RS04560 () | 830953..831144 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| C6668_RS04565 () | 831238..833709 | + | 2472 | WP_001515375.1 | exonuclease | - |
| C6668_RS04570 () | 833782..834033 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| C6668_RS04575 () | 834068..835348 | + | 1281 | WP_000876979.1 | hypothetical protein ; Integrase | Integrase |
| C6668_RS04585 () | 835536..836072 | - | 537 | Protein_853 | zinc-binding dehydrogenase | - |
| C6668_RS04590 () | 836074..836733 | - | 660 | Protein_854 | starvation-sensing protein RspA | - |
| C6668_RS04600 () | 836939..837265 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| C6668_RS04605 () | 837400..837741 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| C6668_RS04610 () | 837776..838336 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C6668_RS04615 () | 838339..839049 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| C6668_RS04620 () | 839157..839462 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|