MGE detailed information
MGE type: Prophage MGE length: 73269 bp
Accession: NZ_CP028165 Location: 576537..649805 Organism: Staphylococcus aureus strain CFSAN064037 Replicon: chromosome
Accession: NZ_CP028165 Location: 576537..649805 Organism: Staphylococcus aureus strain CFSAN064037 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9J78_RS02715 () | 571854..572504 | + | 651 | WP_001803972.1 | excalibur calcium-binding domain-containing protein | - |
| C9J78_RS02720 () | 572585..573580 | + | 996 | WP_000070661.1 | DUF4352 domain-containing protein | - |
| C9J78_RS02725 () | 573656..574282 | + | 627 | WP_000669041.1 | hypothetical protein | - |
| C9J78_RS02730 () | 574323..574667 | + | 345 | WP_000627545.1 | DUF3969 family protein | - |
| C9J78_RS02735 () | 574765..575337 | + | 573 | WP_000414229.1 | hypothetical protein | - |
| C9J78_RS02740 () | 575713..576549 | + | 837 | WP_000190484.1 | ABC transporter ATP-binding protein | - |
| C9J78_RS02750 () | 577356..577541 | - | 186 | WP_000809858.1 | hypothetical protein | - |
| C9J78_RS02755 () | 577543..577719 | - | 177 | WP_000375476.1 | hypothetical protein | - |
| C9J78_RS02760 () | 577730..578113 | - | 384 | WP_000070811.1 | hypothetical protein | - |
| C9J78_RS02765 () | 578800..579246 | - | 447 | WP_000747809.1 | DUF1433 domain-containing protein | - |
| C9J78_RS02775 () | 579698..579793 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 579821..579878 | - | 58 | - | - | Antitoxin Detail |
| C9J78_RS02780 () | 579916..580017 | + | 102 | WP_001791232.1 | hypothetical protein | - |
| C9J78_RS02785 () | 580055..580171 | - | 117 | Protein_533 | transposase | - |
| C9J78_RS02790 () | 580680..584792 | - | 4113 | WP_107240618.1 | ATP-binding protein | - |
| C9J78_RS02795 () | 585555..586754 | - | 1200 | WP_000072598.1 | restriction endonuclease subunit S | - |
| C9J78_RS02800 () | 586747..588303 | - | 1557 | WP_043039510.1 | type I restriction-modification system subunit M | - |
| C9J78_RS02805 () | 588464..588592 | - | 129 | Protein_537 | hypothetical protein | - |
| C9J78_RS02810 () | 588657..589376 | - | 720 | WP_103145528.1 | serine protease SplF | - |
| C9J78_RS02815 () | 589501..590220 | - | 720 | WP_001039437.1 | hypothetical protein | VF |
| C9J78_RS02820 () | 590278..591000 | - | 723 | WP_001038876.1 | hypothetical protein | VF |
| C9J78_RS02825 () | 591058..591780 | - | 723 | WP_001043716.1 | hypothetical protein | VF |
| C9J78_RS02830 () | 591905..592612 | - | 708 | WP_001039436.1 | hypothetical protein | VF |
| C9J78_RS02840 () | 593567..594148 | + | 582 | WP_001092777.1 | DUF4888 domain-containing protein | - |
| C9J78_RS02845 () | 594622..594908 | - | 287 | Protein_544 | hypothetical protein | - |
| C9J78_RS02850 () | 595081..595554 | + | 474 | WP_000550244.1 | hypothetical protein | - |
| C9J78_RS02855 () | 595559..596350 | + | 792 | WP_000543851.1 | DUF1828 domain-containing protein | - |
| C9J78_RS02860 () | 596720..597703 | - | 984 | WP_000782469.1 | hypothetical protein | VF |
| C9J78_RS02865 () | 597705..598640 | - | 936 | WP_000473589.1 | hypothetical protein | VF |
| C9J78_RS02870 () | 599521..599925 | + | 405 | WP_001086050.1 | hypothetical protein | - |
| C9J78_RS02875 () | 599989..600777 | + | 789 | WP_107240619.1 | DUF1828 domain-containing protein | - |
| C9J78_RS02885 () | 602098..602562 | + | 465 | WP_000825945.1 | hypothetical protein | - |
| C9J78_RS02895 () | 603767..604771 | - | 1005 | WP_107240620.1 | restriction endonuclease subunit S | - |
| C9J78_RS02900 () | 604755..606647 | - | 1893 | WP_107240621.1 | N-6 DNA methylase | - |
| C9J78_RS02905 () | 607035..608480 | - | 1446 | WP_107240622.1 | SH3 domain-containing protein | - |
| C9J78_RS02910 () | 608461..608898 | - | 438 | WP_107240623.1 | phage holin | - |
| C9J78_RS02915 () | 608949..610961 | - | 2013 | WP_107240624.1 | BppU family phage baseplate upper protein | - |
| C9J78_RS02920 () | 610974..612848 | - | 1875 | WP_107240625.1 | glucosaminidase domain-containing protein | - |
| C9J78_RS02925 () | 612985..613284 | - | 300 | WP_107240626.1 | DUF2951 family protein | - |
| C9J78_RS02930 () | 613325..613498 | - | 174 | WP_001790193.1 | XkdX family protein | - |
| C9J78_RS02935 () | 613508..613885 | - | 378 | WP_065315646.1 | DUF2977 domain-containing protein | - |
| C9J78_RS02940 () | 613885..615708 | - | 1824 | WP_107240627.1 | BppU family phage baseplate upper protein | - |
| C9J78_RS02945 () | 615708..617606 | - | 1899 | WP_107240628.1 | hypothetical protein | - |
| C9J78_RS02950 () | 617619..619505 | - | 1887 | WP_107240629.1 | phage tail protein | - |
| C9J78_RS02955 () | 619516..620457 | - | 942 | WP_107240630.1 | phage tail family protein | - |
| C9J78_RS02960 () | 620472..623357 | - | 2886 | WP_107240631.1 | terminase | - |
| C9J78_RS02965 () | 623361..623645 | - | 285 | WP_031911809.1 | hypothetical protein | - |
| C9J78_RS02970 () | 623690..624202 | - | 513 | WP_000134336.1 | hypothetical protein | - |
| C9J78_RS02975 () | 624269..624826 | - | 558 | WP_000057585.1 | hypothetical protein | - |
| C9J78_RS02980 () | 624827..625252 | - | 426 | WP_000270192.1 | DUF3168 domain-containing protein | - |
| C9J78_RS02985 () | 625265..625678 | - | 414 | WP_107240632.1 | HK97 gp10 family phage protein | - |
| C9J78_RS02990 () | 625665..626000 | - | 336 | WP_107240633.1 | phage head closure protein | - |
| C9J78_RS02995 () | 626012..626362 | - | 351 | WP_046597552.1 | phage head-tail adapter protein | - |
| C9J78_RS14135 () | 626368..626511 | - | 144 | WP_000002930.1 | hypothetical protein | - |
| C9J78_RS03000 () | 626523..627437 | - | 915 | WP_000235170.1 | phage major capsid protein | - |
| C9J78_RS03005 () | 627454..628038 | - | 585 | WP_107240634.1 | DUF4355 domain-containing protein | - |
| C9J78_RS03010 () | 628134..629084 | - | 951 | WP_107240635.1 | phage head morphogenesis protein | - |
| C9J78_RS03015 () | 629053..630477 | - | 1425 | WP_107240636.1 | phage portal protein | - |
| C9J78_RS03020 () | 630474..631697 | - | 1224 | WP_107240637.1 | PBSX family phage terminase large subunit | - |
| C9J78_RS03025 () | 631690..632184 | - | 495 | WP_000594089.1 | terminase small subunit | - |
| C9J78_RS03030 () | 632512..632934 | - | 423 | WP_000162701.1 | RinA family phage transcriptional activator | - |
| C9J78_RS03035 () | 632958..633104 | - | 147 | WP_000989998.1 | hypothetical protein | - |
| C9J78_RS03040 () | 633105..633470 | - | 366 | WP_046597490.1 | hypothetical protein | - |
| C9J78_RS03045 () | 633471..633644 | - | 174 | WP_050957894.1 | transcriptional activator RinB | - |
| C9J78_RS03050 () | 633646..633834 | - | 189 | WP_046597488.1 | hypothetical protein | - |
| C9J78_RS03055 () | 633831..634037 | - | 207 | WP_046597487.1 | DUF1381 domain-containing protein | - |
| C9J78_RS03060 () | 634074..634610 | - | 537 | WP_107240638.1 | dUTPase | - |
| C9J78_RS03065 () | 634603..634851 | - | 249 | WP_001065080.1 | DUF1024 family protein | - |
| C9J78_RS03075 () | 635119..635529 | - | 411 | WP_000695750.1 | hypothetical protein | - |
| C9J78_RS03080 () | 635543..635785 | - | 243 | WP_000774794.1 | phi PVL orf 51-like protein | - |
| C9J78_RS03085 () | 635789..636157 | - | 369 | WP_057485226.1 | hypothetical protein | - |
| C9J78_RS14140 () | 636158..636343 | - | 186 | WP_070001472.1 | DUF3113 family protein | - |
| C9J78_RS03090 () | 636348..636752 | - | 405 | WP_107240639.1 | DUF1064 domain-containing protein | - |
| C9J78_RS03095 () | 636763..636984 | - | 222 | WP_001123688.1 | DUF3269 family protein | - |
| C9J78_RS03100 () | 636987..637202 | - | 216 | WP_031902399.1 | hypothetical protein | - |
| C9J78_RS03105 () | 637199..638440 | - | 1242 | WP_107240640.1 | AAA family ATPase | - |
| C9J78_RS03110 () | 638437..638793 | - | 357 | WP_107240641.1 | hypothetical protein | - |
| C9J78_RS03115 () | 638793..639548 | - | 756 | WP_107240642.1 | DnaD domain protein | - |
| C9J78_RS03120 () | 639541..640215 | - | 675 | Protein_598 | hypothetical protein | - |
| C9J78_RS03125 () | 640229..640654 | - | 426 | WP_046597477.1 | single-stranded DNA-binding protein | - |
| C9J78_RS03130 () | 640654..641292 | - | 639 | WP_001043065.1 | ERF family protein | - |
| C9J78_RS03135 () | 641292..641771 | - | 480 | WP_107240643.1 | siphovirus Gp157 family protein | - |
| C9J78_RS03140 () | 641786..642046 | - | 261 | WP_000291089.1 | DUF1108 family protein | - |
| C9J78_RS03145 () | 642140..642301 | - | 162 | WP_000048119.1 | DUF1270 family protein | - |
| C9J78_RS03150 () | 642316..642531 | - | 216 | WP_001093507.1 | DUF771 domain-containing protein | - |
| C9J78_RS03155 () | 642544..643299 | - | 756 | WP_050972079.1 | phage antirepressor KilAC domain-containing protein | - |
| C9J78_RS03160 () | 643301..643486 | - | 186 | WP_000933365.1 | helix-turn-helix transcriptional regulator | - |
| C9J78_RS03165 () | 643932..644414 | + | 483 | WP_000394410.1 | hypothetical protein | - |
| C9J78_RS14145 () | 644465..644632 | - | 168 | WP_000398749.1 | hypothetical protein | - |
| C9J78_RS03170 () | 644648..644887 | - | 240 | WP_107240644.1 | helix-turn-helix domain-containing protein | - |
| C9J78_RS03175 () | 645080..645412 | + | 333 | WP_107240645.1 | helix-turn-helix transcriptional regulator | - |
| C9J78_RS03180 () | 645424..645885 | + | 462 | WP_107240646.1 | ImmA/IrrE family metallo-endopeptidase | - |
| C9J78_RS03185 () | 645917..646597 | + | 681 | WP_107240647.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| C9J78_RS03190 () | 646805..647869 | + | 1065 | WP_000115736.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C9J78_RS03235 () | 649251..649805 | - | 555 | WP_000132893.1 | alpha/beta hydrolase | - |
| C9J78_RS03245 () | 650118..651518 | - | 1401 | WP_000167546.1 | protoporphyrinogen oxidase | - |
| C9J78_RS03250 () | 651542..652465 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| C9J78_RS03255 () | 652523..653560 | - | 1038 | WP_000233534.1 | uroporphyrinogen decarboxylase | - |
| C9J78_RS03260 () | 653550..653657 | - | 108 | Protein_618 | hypothetical protein | - |
| C9J78_RS03265 () | 653822..654325 | + | 504 | WP_000737980.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|