MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 56636 bp
Accession: NZ_CP028152 Location: 1..56636 Organism: Salmonella enterica subsp. enterica serovar Enteritidis str. RM2968 Replicon: plasmid pRM2968-1
Accession: NZ_CP028152 Location: 1..56636 Organism: Salmonella enterica subsp. enterica serovar Enteritidis str. RM2968 Replicon: plasmid pRM2968-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEEERM2968_RS23805 () | 96..548 | + | 453 | WP_000477657.1 | DSBA oxidoreductase | - |
| SEEERM2968_RS23810 () | 670..954 | + | 285 | WP_001676658.1 | hypothetical protein | - |
| SEEERM2968_RS23815 () | 911..1150 | + | 240 | WP_077681954.1 | phospholipase | - |
| SEEERM2968_RS23820 () | 1329..1595 | + | 267 | WP_016710725.1 | replication regulatory protein RepA | - |
| SEEERM2968_RS23825 () | 1845..1922 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| SEEERM2968_RS23830 () | 1903..2784 | + | 882 | WP_001676666.1 | incFII family plasmid replication initiator RepA | - |
| SEEERM2968_RS23840 () | 3640..3861 | + | 222 | WP_071530245.1 | SdiA-regulated domain-containing protein | - |
| SEEERM2968_RS23845 () | 3958..4704 | - | 747 | WP_000417897.1 | AraC family transcriptional regulator | - |
| SEEERM2968_RS23850 () | 4970..5527 | - | 558 | WP_000725064.1 | complement resistance protein Rck | - |
| SEEERM2968_RS23855 () | 5617..6462 | - | 846 | WP_058684844.1 | YjiK family protein | - |
| SEEERM2968_RS24880 () | 6513..6659 | - | 147 | WP_001141718.1 | hypothetical protein | - |
| SEEERM2968_RS23860 () | 6649..7305 | - | 657 | WP_077907617.1 | DsbA family protein | - |
| SEEERM2968_RS23865 () | 7549..7899 | - | 351 | WP_069057556.1 | helix-turn-helix transcriptional regulator | - |
| SEEERM2968_RS23870 () | 7884..8096 | - | 213 | WP_000004289.1 | transcriptional regulator PefI | - |
| SEEERM2968_RS23875 () | 8356..9210 | - | 855 | WP_001676641.1 | hypothetical protein | - |
| SEEERM2968_RS23880 () | 9393..9707 | - | 315 | Protein_15 | hypothetical protein | - |
| SEEERM2968_RS23885 () | 9711..10325 | - | 615 | Protein_16 | outer membrane usher protein PefC | - |
| SEEERM2968_RS23890 () | 10552..11076 | - | 525 | WP_000748204.1 | fimbrial protein | - |
| SEEERM2968_RS23895 () | 11351..11653 | - | 303 | WP_069057557.1 | transcriptional regulator PefB | - |
| SEEERM2968_RS23900 () | 11682..11993 | + | 312 | WP_164705972.1 | hypothetical protein | - |
| SEEERM2968_RS23905 () | 12360..12746 | + | 387 | WP_000751876.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| SEEERM2968_RS23910 () | 12799..12960 | + | 162 | WP_015059604.1 | hypothetical protein | - |
| SEEERM2968_RS23915 () | 13287..14276 | - | 990 | WP_000461382.1 | RepB family plasmid replication initiator protein | - |
| SEEERM2968_RS23920 () | 14770..15065 | - | 296 | Protein_23 | cytoplasmic protein | - |
| SEEERM2968_RS24885 () | 15077..15505 | + | 429 | Protein_24 | hypothetical protein | - |
| SEEERM2968_RS23930 () | 15549..16070 | - | 522 | WP_077681952.1 | hypothetical protein | - |
| SEEERM2968_RS23935 () | 16746..16964 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| SEEERM2968_RS23940 () | 16966..17271 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| SEEERM2968_RS23945 () | 17273..17563 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| SEEERM2968_RS23950 () | 17560..18081 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| SEEERM2968_RS23955 () | 18116..18898 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| SEEERM2968_RS23960 () | 18907..19620 | + | 714 | WP_000545756.1 | EAL domain-containing protein | - |
| SEEERM2968_RS23965 () | 19624..20133 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| SEEERM2968_RS23970 () | 20127..20612 | + | 486 | WP_000905606.1 | membrane protein | - |
| SEEERM2968_RS23975 () | 20889..21176 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| SEEERM2968_RS23980 () | 21332..21892 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| SEEERM2968_RS23985 () | 21959..22309 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| SEEERM2968_RS23990 () | 22366..22791 | + | 426 | WP_000064919.1 | IS200/IS605 family transposase | - |
| SEEERM2968_RS23995 () | 22918..23568 | - | 651 | WP_069057559.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| SEEERM2968_RS24000 () | 23830..24555 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| SEEERM2968_RS24005 () | 24836..26611 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| SEEERM2968_RS24890 () | 26663..26830 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| SEEERM2968_RS24010 () | 26793..27560 | - | 768 | WP_001676649.1 | virulence protein SpvA | - |
| SEEERM2968_RS24015 () | 27734..27898 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| SEEERM2968_RS24020 () | 28072..28965 | - | 894 | WP_000346689.1 | virulence genes transcriptional activator SpvR | - |
| SEEERM2968_RS24025 () | 29573..30610 | + | 1038 | WP_001121400.1 | IS630 family transposase | - |
| SEEERM2968_RS24030 () | 30799..31824 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| SEEERM2968_RS24035 () | 31757..33421 | - | 1665 | WP_000098781.1 | IS481 family transposase | - |
| SEEERM2968_RS24040 () | 33405..33965 | - | 561 | WP_001240330.1 | recombinase family protein | - |
| SEEERM2968_RS24045 () | 34172..34912 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| SEEERM2968_RS24055 () | 35567..36055 | - | 489 | WP_001135409.1 | hypothetical protein | - |
| SEEERM2968_RS24060 () | 36313..37428 | + | 1116 | WP_001247117.1 | DNA-binding protein | - |
| SEEERM2968_RS24065 () | 37514..37930 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| SEEERM2968_RS24070 () | 38114..38449 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| SEEERM2968_RS24075 () | 38506..39111 | + | 606 | WP_000176303.1 | DUF2913 family protein | - |
| SEEERM2968_RS24080 () | 39108..40049 | - | 942 | WP_000728919.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| SEEERM2968_RS24085 () | 40464..41669 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| SEEERM2968_RS24090 () | 41669..42643 | + | 975 | WP_000064277.1 | ParB/RepB/Spo0J family partition protein | - |
| SEEERM2968_RS24095 () | 42725..43999 | - | 1275 | WP_000457542.1 | Y-family DNA polymerase | - |
| SEEERM2968_RS24100 () | 43999..44421 | - | 423 | WP_000925628.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| SEEERM2968_RS24105 () | 44722..46443 | + | 1722 | Protein_60 | ParB/RepB/Spo0J family partition protein | - |
| SEEERM2968_RS24110 () | 46486..46650 | + | 165 | WP_001676653.1 | hypothetical protein | - |
| SEEERM2968_RS24115 () | 46587..47243 | + | 657 | Protein_62 | plasmid SOS inhibition protein A | - |
| SEEERM2968_RS24760 () | 47492..47650 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| SEEERM2968_RS24895 () | 47753..48571 | + | 819 | Protein_64 | DUF945 domain-containing protein | - |
| SEEERM2968_RS24125 () | 48882..49352 | - | 471 | WP_015056628.1 | transglycosylase SLT domain-containing protein | - |
| SEEERM2968_RS24135 () | 49768..50148 | + | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| SEEERM2968_RS24140 () | 50342..51027 | + | 686 | Protein_67 | PAS domain-containing protein | - |
| SEEERM2968_RS24145 () | 51121..51348 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| SEEERM2968_RS24150 () | 51390..51752 | + | 363 | WP_001274199.1 | type IV conjugative transfer system pilin TraA | - |
| SEEERM2968_RS24155 () | 51767..52078 | + | 312 | WP_000012130.1 | type IV conjugative transfer system protein TraL | - |
| SEEERM2968_RS24160 () | 52100..52666 | + | 567 | WP_000399767.1 | type IV conjugative transfer system protein TraE | - |
| SEEERM2968_RS24165 () | 52653..53393 | + | 741 | WP_001230718.1 | type-F conjugative transfer system secretin TraK | - |
| SEEERM2968_RS24170 () | 53393..54814 | + | 1422 | WP_000146697.1 | conjugal transfer protein TraB | - |
| SEEERM2968_RS24175 () | 54804..55400 | + | 597 | WP_000527901.1 | conjugal transfer protein TraP | - |
| SEEERM2968_RS24180 () | 55378..55602 | + | 225 | WP_016716015.1 | DUF2689 domain-containing protein | - |
| SEEERM2968_RS24185 () | 55599..56113 | + | 515 | Protein_76 | type IV conjugative transfer system lipoprotein TraV | - |
| SEEERM2968_RS24190 () | 56193..56615 | + | 423 | Protein_77 | fertility inhibition protein FinO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|