MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 19217 bp
Accession: NZ_CP028143 Location: 1..19217 Organism: Vibrio parahaemolyticus strain R14 Replicon: plasmid pVpR14_20Kb
Accession: NZ_CP028143 Location: 1..19217 Organism: Vibrio parahaemolyticus strain R14 Replicon: plasmid pVpR14_20Kb
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9I78_RS25870 () | 535..3537 | - | 3003 | WP_031419875.1 | Tn3 family transposase ISEc63 | Transposase |
| C9I78_RS25875 () | 3695..4252 | + | 558 | WP_031419876.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| C9I78_RS25880 () | 4657..5535 | - | 879 | WP_108745456.1 | tyrosine-type recombinase/integrase | - |
| C9I78_RS25885 () | 5758..6132 | - | 375 | WP_080608536.1 | hypothetical protein | - |
| C9I78_RS25890 () | 6129..6644 | - | 516 | WP_080608537.1 | ParA family protein | - |
| C9I78_RS25895 () | 6851..7225 | + | 375 | WP_108745457.1 | DUF4236 domain-containing protein | - |
| C9I78_RS25900 () | 7265..7543 | - | 279 | WP_080608539.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| C9I78_RS25905 () | 7540..7857 | - | 318 | WP_080608540.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9I78_RS25915 () | 8790..9674 | + | 885 | WP_108745458.1 | site-specific integrase | - |
| C9I78_RS25920 () | 9671..10330 | + | 660 | WP_108745459.1 | hypothetical protein | - |
| C9I78_RS25925 () | 10379..10771 | + | 393 | WP_108745460.1 | hypothetical protein | - |
| C9I78_RS26765 () | 10774..10941 | + | 168 | WP_159087269.1 | hypothetical protein | - |
| C9I78_RS25930 () | 11001..11288 | + | 288 | WP_080608545.1 | hypothetical protein | - |
| C9I78_RS25935 () | 11329..12351 | - | 1023 | WP_103199658.1 | hypothetical protein | - |
| C9I78_RS25940 () | 12563..13399 | - | 837 | WP_108745461.1 | hypothetical protein | - |
| C9I78_RS25945 () | 13699..14925 | + | 1227 | WP_108745462.1 | tyrosine-type recombinase/integrase | - |
| C9I78_RS25950 () | 14925..15386 | + | 462 | WP_108745463.1 | hypothetical protein | - |
| C9I78_RS25955 () | 15565..16707 | + | 1143 | WP_108745464.1 | GIY-YIG nuclease family protein | - |
| C9I78_RS25960 () | 16747..17124 | - | 378 | WP_108745465.1 | hypothetical protein | - |
| C9I78_RS25965 () | 17768..18061 | + | 294 | WP_108745466.1 | DUF1778 domain-containing protein | - |
| C9I78_RS25970 () | 18042..18554 | + | 513 | WP_108745467.1 | GNAT family N-acetyltransferase | - |
| C9I78_RS25975 () | 18722..18964 | + | 243 | WP_108745469.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|