MGE detailed information
MGE type: Prophage MGE length: 115546 bp
Accession: NZ_CP028126 Location: 2162004..2277549 Organism: Escherichia coli O26 str. RM10386 Replicon: chromosome
Accession: NZ_CP028126 Location: 2162004..2277549 Organism: Escherichia coli O26 str. RM10386 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3U_RS13195 () | 2157246..2158919 | - | 1674 | WP_001022772.1 | carbohydrate porin | - |
| I3U_RS13200 () | 2158975..2159286 | - | 312 | WP_001296721.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| I3U_RS13205 () | 2159314..2160636 | - | 1323 | WP_001375402.1 | PTS sugar transporter subunit IIC | - |
| I3U_RS13210 () | 2160751..2161062 | - | 312 | WP_000722571.1 | PTS sugar transporter subunit IIB | - |
| I3U_RS13215 () | 2161261..2161959 | + | 699 | WP_000577179.1 | GntR family transcriptional regulator | - |
| I3U_RS13220 () | 2162004..2162903 | - | 900 | WP_000087216.1 | O-acetylserine/cysteine exporter | - |
| I3U_RS13225 () | 2163098..2164285 | + | 1188 | WP_001052938.1 | efflux MFS transporter YdeE | - |
| I3U_RS13230 () | 2164412..2164507 | + | 96 | WP_000901367.1 | protein MgtS | - |
| I3U_RS33535 () | 2164507..2164611 | + | 105 | WP_211180496.1 | protein MgtT | - |
| I3U_RS13235 () | 2164726..2165016 | - | 291 | Protein_2213 | diguanylate cyclase DgcZ | - |
| I3U_RS13240 () | 2165029..2165726 | - | 698 | Protein_2214 | IS1 family transposase | - |
| I3U_RS13245 () | 2165781..2166392 | - | 612 | Protein_2215 | diguanylate cyclase DgcZ | - |
| I3U_RS13250 () | 2166647..2167039 | - | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| I3U_RS13255 () | 2167315..2167833 | + | 519 | WP_001024559.1 | 2-oxo-tetronate isomerase | - |
| I3U_RS13265 () | 2167878..2169923 | - | 2046 | WP_001341522.1 | peptidyl-dipeptidase Dcp | - |
| I3U_RS13275 () | 2170060..2170806 | + | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| I3U_RS13280 () | 2170895..2171581 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| I3U_RS13285 () | 2171759..2171962 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| I3U_RS13290 () | 2171998..2173458 | - | 1461 | Protein_2222 | mannitol dehydrogenase family protein | - |
| I3U_RS13295 () | 2173547..2174830 | - | 1284 | Protein_2223 | MHS family MFS transporter YdfJ | - |
| I3U_RS13300 () | 2174962..2175204 | + | 243 | WP_001120551.1 | DinI-like family protein | - |
| I3U_RS13310 () | 2175575..2176588 | - | 1014 | WP_122993102.1 | hypothetical protein | VF |
| I3U_RS13320 () | 2176991..2177260 | - | 270 | WP_001023433.1 | phage tail fiber C-terminal domain-containing protein | - |
| I3U_RS13325 () | 2177262..2178575 | - | 1314 | WP_000279009.1 | ISNCY family transposase KIS | Transposase |
| I3U_RS13330 () | 2178640..2179263 | - | 624 | WP_001456919.1 | Attachment invasion locus protein | VF |
| I3U_RS13335 () | 2179332..2182808 | - | 3477 | WP_000515131.1 | host specificity protein J | - |
| I3U_RS13340 () | 2183054..2183686 | - | 633 | WP_133253573.1 | tail assembly protein | - |
| I3U_RS13345 () | 2183632..2184375 | - | 744 | WP_000194802.1 | C40 family peptidase | - |
| I3U_RS13350 () | 2184386..2185084 | - | 699 | WP_001357740.1 | phage minor tail protein L | - |
| I3U_RS13355 () | 2185084..2185413 | - | 330 | WP_000847298.1 | phage tail protein | - |
| I3U_RS13360 () | 2185410..2188021 | - | 2612 | Protein_2234 | phage tail tape measure protein | - |
| I3U_RS13365 () | 2188002..2188415 | - | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| I3U_RS13370 () | 2188442..2188864 | - | 423 | WP_000479045.1 | phage minor tail protein G | - |
| I3U_RS13375 () | 2188878..2189630 | - | 753 | WP_000235099.1 | Ig domain-containing protein | - |
| I3U_RS13380 () | 2189638..2190033 | - | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| I3U_RS13385 () | 2190030..2190563 | - | 534 | WP_000975020.1 | phage tail protein | - |
| I3U_RS13390 () | 2190578..2190931 | - | 354 | WP_000752969.1 | head-tail joining protein | - |
| I3U_RS13395 () | 2190943..2191338 | - | 396 | WP_000158901.1 | DNA-packaging protein FI | - |
| I3U_RS13400 () | 2191380..2192405 | - | 1026 | WP_000063258.1 | major capsid protein | - |
| I3U_RS13405 () | 2192461..2192793 | - | 333 | WP_001295978.1 | head decoration protein | - |
| I3U_RS13410 () | 2192803..2194122 | - | 1320 | WP_000123254.1 | S49 family peptidase | - |
| I3U_RS13415 () | 2194103..2195704 | - | 1602 | WP_001301524.1 | phage portal protein | - |
| I3U_RS13420 () | 2195701..2195907 | - | 207 | WP_000198153.1 | gpW family protein | - |
| I3U_RS13425 () | 2195904..2197829 | - | 1926 | WP_001027230.1 | phage terminase large subunit family protein | - |
| I3U_RS13430 () | 2197804..2198349 | - | 546 | WP_000867498.1 | terminase small subunit | - |
| I3U_RS13440 () | 2198736..2198960 | + | 225 | WP_001431375.1 | YlcI/YnfO family protein | - |
| I3U_RS13445 () | 2199042..2199356 | - | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| I3U_RS32955 () | 2199884..2200069 | - | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| I3U_RS13460 () | 2200291..2200400 | - | 110 | Protein_2252 | hypothetical protein | - |
| I3U_RS13465 () | 2200621..2201154 | - | 534 | WP_000992045.1 | lysozyme | - |
| I3U_RS13470 () | 2201666..2202457 | - | 792 | WP_001041949.1 | DUF1327 domain-containing protein | - |
| I3U_RS13475 () | 2202461..2202676 | - | 216 | WP_024165672.1 | class II holin family protein | - |
| I3U_RS13485 () | 2203115..2204965 | - | 1851 | WP_032325211.1 | SASA family carbohydrate esterase | - |
| I3U_RS13495 () | 2205192..2205447 | - | 256 | Protein_2257 | DUF3927 family protein | - |
| I3U_RS13500 () | 2205444..2205875 | - | 432 | WP_001299632.1 | tellurite resistance protein | - |
| I3U_RS13505 () | 2206065..2206274 | - | 210 | WP_000498121.1 | hypothetical protein | - |
| I3U_RS13510 () | 2206327..2206551 | - | 225 | WP_000735807.1 | hypothetical protein | - |
| I3U_RS33540 () | 2206932..2207081 | - | 150 | Protein_2261 | DNA methylase | - |
| I3U_RS13540 () | 2207396..2208148 | - | 753 | WP_001047111.1 | antitermination protein | - |
| I3U_RS13545 () | 2208162..2209211 | - | 1050 | WP_001375683.1 | DUF968 domain-containing protein | - |
| I3U_RS13550 () | 2209213..2209482 | - | 270 | WP_012817785.1 | hypothetical protein | - |
| I3U_RS13555 () | 2209536..2209763 | - | 228 | WP_001452497.1 | hypothetical protein | - |
| I3U_RS13560 () | 2209987..2210358 | + | 372 | WP_001217944.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I3U_RS13565 () | 2210351..2210668 | + | 318 | WP_000042395.1 | DNA-binding transcriptional regulator | - |
| I3U_RS13570 () | 2210771..2210926 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I3U_RS13580 () | 2211198..2211749 | - | 552 | WP_000211993.1 | ORF6N domain-containing protein | - |
| I3U_RS13585 () | 2212101..2212286 | - | 186 | WP_000215512.1 | hypothetical protein | - |
| I3U_RS13590 () | 2212346..2213107 | - | 762 | WP_000450895.1 | DUF1627 domain-containing protein | - |
| I3U_RS13595 () | 2213137..2213877 | - | 741 | WP_000790460.1 | ATP-binding protein | - |
| I3U_RS13600 () | 2213884..2214849 | - | 966 | WP_000054520.1 | hypothetical protein | - |
| I3U_RS13605 () | 2214830..2215351 | - | 522 | WP_000705368.1 | hypothetical protein | - |
| I3U_RS13610 () | 2215335..2215565 | - | 231 | WP_000920571.1 | dicB transcriptional regulator DicC | - |
| I3U_RS13615 () | 2215649..2216056 | + | 408 | WP_000379972.1 | helix-turn-helix domain-containing protein | - |
| I3U_RS13620 () | 2216223..2216375 | + | 153 | WP_000380321.1 | DUF1391 family protein | - |
| I3U_RS13625 () | 2216387..2217025 | + | 639 | WP_000394548.1 | hypothetical protein | - |
| I3U_RS13630 () | 2217026..2217235 | - | 210 | WP_001133037.1 | hypothetical protein | - |
| I3U_RS13640 () | 2217800..2217988 | + | 189 | WP_000449175.1 | cell division inhibitor | - |
| I3U_RS13645 () | 2217985..2218173 | + | 189 | WP_000199475.1 | DUF1482 family protein | - |
| I3U_RS13650 () | 2218266..2220728 | + | 2463 | WP_000102117.1 | exonuclease | - |
| I3U_RS13655 () | 2220801..2221052 | + | 252 | WP_000005551.1 | excisionase family protein | - |
| I3U_RS13660 () | 2221072..2221425 | + | 354 | Protein_2284 | DUF3596 domain-containing protein | - |
| I3U_RS13665 () | 2221489..2222645 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| I3U_RS13670 () | 2222690..2223634 | + | 945 | Protein_2286 | Putative defective protein IntQ ; Integrase | Integrase |
| I3U_RS32965 () | 2224283..2224396 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| I3U_RS13680 () | 2224465..2224698 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| I3U_RS13685 () | 2225015..2225605 | + | 591 | WP_000086514.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| I3U_RS13690 () | 2225703..2226278 | - | 576 | WP_000885616.1 | tail fiber assembly protein | - |
| I3U_RS13700 () | 2227557..2230505 | - | 2949 | WP_100005742.1 | prophage tail fiber N-terminal domain-containing protein | - |
| I3U_RS13705 () | 2230570..2231169 | - | 600 | WP_001233114.1 | Outer membrane protein X | VF |
| I3U_RS13710 () | 2231240..2234653 | - | 3414 | WP_000515505.1 | host specificity protein J | - |
| I3U_RS13715 () | 2234714..2235361 | - | 648 | WP_000741589.1 | tail assembly protein | - |
| I3U_RS13720 () | 2235259..2236002 | - | 744 | WP_000140707.1 | C40 family peptidase | - |
| I3U_RS13725 () | 2236007..2236705 | - | 699 | WP_001152371.1 | phage minor tail protein L | - |
| I3U_RS13730 () | 2236715..2237044 | - | 330 | WP_000447251.1 | phage tail protein | - |
| I3U_RS13735 () | 2237044..2240109 | - | 3066 | WP_000372024.1 | phage tail tape measure protein | - |
| I3U_RS13740 () | 2240081..2240410 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| I3U_RS13745 () | 2240419..2240805 | - | 387 | WP_001341514.1 | phage minor tail protein G | - |
| I3U_RS13750 () | 2240866..2241609 | - | 744 | WP_000211132.1 | Ig domain-containing protein | - |
| I3U_RS13755 () | 2241620..2242021 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| I3U_RS13760 () | 2242018..2242596 | - | 579 | WP_000677128.1 | phage tail protein | - |
| I3U_RS13765 () | 2242608..2242883 | - | 276 | WP_001283148.1 | DNA breaking-rejoining protein | - |
| I3U_RS13770 () | 2242876..2243199 | - | 324 | WP_001097041.1 | DUF2190 family protein | - |
| I3U_RS13775 () | 2243286..2245313 | - | 2028 | WP_001136588.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| I3U_RS13780 () | 2245258..2246766 | - | 1509 | WP_000985929.1 | phage portal protein | - |
| I3U_RS13785 () | 2246766..2246978 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| I3U_RS13790 () | 2246975..2249074 | - | 2100 | WP_000507036.1 | phage terminase large subunit family protein | - |
| I3U_RS13795 () | 2249083..2249622 | - | 540 | WP_000421825.1 | DUF1441 family protein | - |
| I3U_RS13800 () | 2250183..2250389 | - | 207 | WP_001031435.1 | hypothetical protein | - |
| I3U_RS13810 () | 2250690..2251100 | + | 411 | WP_000035577.1 | DUF1398 domain-containing protein | - |
| I3U_RS13815 () | 2251252..2251425 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| I3U_RS32970 () | 2251597..2251752 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| I3U_RS32975 () | 2251832..2251897 | - | 66 | WP_122134696.1 | hypothetical protein | - |
| I3U_RS13825 () | 2251900..2252088 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| I3U_RS13830 () | 2252099..2252311 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| I3U_RS13835 () | 2252674..2253171 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| I3U_RS13840 () | 2253168..2253701 | - | 534 | WP_001092971.1 | lysozyme | - |
| I3U_RS13845 () | 2253698..2254009 | - | 312 | WP_000189915.1 | YdfR family protein | - |
| I3U_RS13850 () | 2254014..2254229 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| I3U_RS33545 () | 2254449..2254619 | + | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| I3U_RS13855 () | 2254983..2255198 | - | 216 | WP_000066483.1 | cold shock-like protein CspB | - |
| I3U_RS13860 () | 2255499..2255711 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| I3U_RS32980 () | 2255766..2255855 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| I3U_RS13865 () | 2256133..2256885 | - | 753 | WP_001047133.1 | antitermination protein | - |
| I3U_RS13870 () | 2256899..2257948 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| I3U_RS13875 () | 2257950..2258228 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| I3U_RS13880 () | 2258295..2258546 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| I3U_RS13885 () | 2258763..2258918 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I3U_RS13890 () | 2258990..2259277 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| I3U_RS13895 () | 2259277..2259516 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| I3U_RS13900 () | 2259541..2259846 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| I3U_RS13905 () | 2260049..2260381 | + | 333 | WP_001317460.1 | FlxA-like family protein | - |
| I3U_RS13910 () | 2260818..2262158 | - | 1341 | WP_000589012.1 | ISNCY family transposase ISCARN112 | Transposase |
| I3U_RS13915 () | 2262192..2262611 | - | 420 | WP_001151195.1 | DUF977 family protein | - |
| I3U_RS13920 () | 2262652..2263617 | - | 966 | WP_000054507.1 | hypothetical protein | - |
| I3U_RS13925 () | 2263598..2264119 | - | 522 | WP_000705349.1 | hypothetical protein | - |
| I3U_RS13930 () | 2264103..2264330 | - | 228 | WP_000476993.1 | transcriptional regulator | - |
| I3U_RS13935 () | 2264408..2264815 | + | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| I3U_RS13940 () | 2265008..2265163 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| I3U_RS13945 () | 2265165..2265740 | + | 576 | WP_000347171.1 | hypothetical protein | - |
| I3U_RS13950 () | 2266227..2266415 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| I3U_RS13955 () | 2266412..2266603 | + | 192 | WP_001083280.1 | lysis protein YdfD | - |
| I3U_RS13960 () | 2266697..2269168 | + | 2472 | WP_106875080.1 | exonuclease | - |
| I3U_RS13965 () | 2269241..2269333 | + | 93 | Protein_2347 | excisionase family protein | - |
| I3U_RS13970 () | 2269364..2270934 | - | 1571 | Protein_2348 | IS66 family transposase ISCro1 | Transposase |
| I3U_RS13975 () | 2270954..2271301 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| I3U_RS13980 () | 2271301..2271978 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| I3U_RS13985 () | 2271968..2272198 | + | 231 | Protein_2351 | excisionase family protein | - |
| I3U_RS13990 () | 2272233..2273513 | + | 1281 | WP_000877011.1 | Putative defective protein IntQ ; Integrase | Integrase |
| I3U_RS14000 () | 2273701..2274720 | - | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| I3U_RS14005 () | 2274732..2275946 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| I3U_RS14015 () | 2276152..2276478 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| I3U_RS14020 () | 2276613..2276954 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| I3U_RS14025 () | 2276989..2277549 | + | 561 | WP_001138576.1 | spermidine N1-acetyltransferase | - |
| I3U_RS14030 () | 2277552..2278262 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| I3U_RS14035 () | 2278370..2278675 | + | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| I3U_RS14040 () | 2278874..2281299 | + | 2426 | Protein_2360 | dimethyl sulfoxide reductase subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|