MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 98899 bp
Accession: NZ_CP028125 Location: 1..98899 Organism: Escherichia coli O26 str. RM10386 Replicon: plasmid pRM10386-1
Accession: NZ_CP028125 Location: 1..98899 Organism: Escherichia coli O26 str. RM10386 Replicon: plasmid pRM10386-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3U_RS00525 () | 433..1628 | - | 1196 | Protein_1 | ParA family protein | - |
| I3U_RS00530 () | 1797..2606 | - | 810 | WP_001154678.1 | GIY-YIG nuclease family protein | - |
| I3U_RS00535 () | 2899..3783 | - | 885 | WP_000888906.1 | RepB family plasmid replication initiator protein | - |
| I3U_RS00540 () | 4117..4509 | - | 393 | WP_001281116.1 | hypothetical protein | - |
| I3U_RS32715 () | 4521..4661 | - | 141 | WP_000336812.1 | hypothetical protein | - |
| I3U_RS00545 () | 4687..5109 | - | 423 | WP_000007769.1 | hypothetical protein | - |
| I3U_RS00550 () | 5149..5937 | - | 789 | WP_000890203.1 | hypothetical protein | - |
| I3U_RS00565 () | 6535..7581 | + | 1047 | Protein_8 | recombination-associated protein RdgC | - |
| I3U_RS00570 () | 7578..10618 | + | 3041 | Protein_9 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| I3U_RS33220 () | 10677..10934 | - | 258 | WP_162467002.1 | hypothetical protein | - |
| I3U_RS00605 () | 12627..13454 | + | 828 | WP_000751806.1 | hypothetical protein | - |
| I3U_RS00615 () | 13838..15202 | + | 1365 | WP_001276599.1 | replicative DNA helicase | - |
| I3U_RS00620 () | 15202..16200 | + | 999 | WP_001198654.1 | hypothetical protein | - |
| I3U_RS00625 () | 16247..16878 | - | 632 | Protein_14 | baseplate protein | - |
| I3U_RS00630 () | 16871..17886 | - | 1016 | Protein_15 | phage tail tape measure protein | - |
| I3U_RS00635 () | 17888..18673 | - | 786 | WP_039719949.1 | hypothetical protein | - |
| I3U_RS00640 () | 18660..19388 | - | 729 | WP_000896801.1 | hypothetical protein | - |
| I3U_RS00645 () | 19392..20608 | - | 1217 | Protein_18 | phage tail protein | - |
| I3U_RS00650 () | 20618..20994 | - | 377 | Protein_19 | hypothetical protein | - |
| I3U_RS00655 () | 21141..21386 | + | 246 | WP_000840931.1 | hypothetical protein | - |
| I3U_RS00660 () | 21389..21965 | + | 577 | Protein_21 | VRR-NUC domain-containing protein | - |
| I3U_RS00665 () | 22032..22187 | + | 156 | WP_000095381.1 | hypothetical protein | - |
| I3U_RS00675 () | 22689..23313 | + | 625 | Protein_23 | norphogenetic protein | - |
| I3U_RS00680 () | 23310..23987 | + | 678 | WP_001354545.1 | metallophosphoesterase | - |
| I3U_RS00685 () | 23984..24685 | + | 702 | WP_000684846.1 | hypothetical protein | - |
| I3U_RS00700 () | 25151..26248 | + | 1098 | WP_109041924.1 | hypothetical protein | - |
| I3U_RS00705 () | 26321..26827 | + | 507 | WP_000021755.1 | hypothetical protein | - |
| I3U_RS00710 () | 27021..27746 | + | 726 | WP_000675629.1 | hypothetical protein | - |
| I3U_RS00715 () | 27786..27977 | + | 192 | WP_024177054.1 | DUF1382 family protein | - |
| I3U_RS00720 () | 27974..28189 | + | 216 | WP_000042974.1 | hypothetical protein | - |
| I3U_RS00725 () | 28182..28826 | + | 645 | WP_000071056.1 | hypothetical protein | - |
| I3U_RS00730 () | 28823..29590 | + | 768 | WP_000154831.1 | ead/Ea22-like family protein | - |
| I3U_RS00735 () | 29587..30075 | + | 489 | WP_001369800.1 | ead/Ea22-like family protein | - |
| I3U_RS00740 () | 30248..30436 | + | 189 | WP_000797279.1 | hypothetical protein | - |
| I3U_RS00745 () | 30438..30647 | + | 210 | WP_000951710.1 | hypothetical protein | - |
| I3U_RS00750 () | 30644..31186 | + | 543 | WP_021351680.1 | DUF551 domain-containing protein | - |
| I3U_RS00755 () | 31269..31502 | + | 234 | WP_000516537.1 | hypothetical protein | - |
| I3U_RS00760 () | 31681..31974 | + | 294 | WP_000269003.1 | hypothetical protein | - |
| I3U_RS00765 () | 31981..32355 | + | 375 | WP_000988658.1 | hypothetical protein | - |
| I3U_RS00770 () | 32337..33269 | + | 933 | WP_000057449.1 | hypothetical protein | - |
| I3U_RS00775 () | 33266..33628 | + | 363 | WP_001261544.1 | hypothetical protein | - |
| I3U_RS33225 () | 33703..33840 | - | 138 | WP_000123562.1 | hypothetical protein | - |
| I3U_RS00785 () | 34290..34541 | + | 252 | WP_001377386.1 | DNA polymerase III subunit theta | - |
| I3U_RS00790 () | 34665..35054 | + | 390 | WP_000506726.1 | DNA repair protein | - |
| I3U_RS00795 () | 35127..35348 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| I3U_RS00800 () | 35348..35728 | + | 381 | WP_001216045.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| I3U_RS00805 () | 35733..35912 | + | 180 | WP_000113019.1 | hypothetical protein | - |
| I3U_RS00810 () | 35940..36983 | + | 1044 | WP_000648825.1 | DUF968 domain-containing protein | - |
| I3U_RS00815 () | 37072..37524 | + | 453 | WP_001369802.1 | hypothetical protein | - |
| I3U_RS00820 () | 37611..38804 | + | 1194 | WP_109041926.1 | terminase | - |
| I3U_RS00825 () | 38804..40288 | + | 1485 | WP_000124155.1 | hypothetical protein | - |
| I3U_RS33230 () | 40285..40849 | + | 565 | Protein_52 | host cell division inhibitor Icd-like protein | - |
| I3U_RS00835 () | 40846..41964 | + | 1119 | WP_021351678.1 | phage antirepressor KilAC domain-containing protein | - |
| I3U_RS00840 () | 41997..42848 | - | 852 | WP_000611662.1 | hypothetical protein | - |
| I3U_RS00845 () | 42959..43168 | - | 210 | WP_000874156.1 | hypothetical protein | - |
| I3U_RS00860 () | 43724..44314 | - | 591 | WP_000086536.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| I3U_RS00865 () | 44475..47458 | + | 2984 | Protein_57 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| I3U_RS00870 () | 47592..47813 | + | 222 | WP_000542336.1 | hypothetical protein | - |
| I3U_RS00875 () | 47821..48852 | + | 1032 | WP_109041928.1 | site-specific integrase | - |
| I3U_RS00880 () | 48903..49214 | + | 312 | WP_001224233.1 | hypothetical protein | - |
| I3U_RS00885 () | 49461..50021 | + | 561 | WP_000848359.1 | Ref family protein | - |
| I3U_RS00890 () | 50211..50852 | + | 642 | WP_001376241.1 | hypothetical protein | - |
| I3U_RS00895 () | 50909..52210 | + | 1302 | Protein_63 | SIR2 family protein | - |
| I3U_RS00900 () | 52252..52500 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| I3U_RS00905 () | 52497..52937 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| I3U_RS00910 () | 52971..59737 | - | 6767 | Protein_66 | N-6 DNA methylase | - |
| I3U_RS00915 () | 59813..61522 | + | 1710 | WP_109041930.1 | phage portal protein | - |
| I3U_RS00920 () | 61515..62534 | + | 1020 | WP_000132937.1 | head processing protein | - |
| I3U_RS32720 () | 62579..62833 | - | 255 | WP_001038142.1 | hypothetical protein | - |
| I3U_RS00930 () | 62826..63383 | - | 558 | WP_109041937.1 | lysozyme | - |
| I3U_RS00935 () | 63553..64041 | + | 489 | WP_000068870.1 | single-stranded DNA-binding protein | - |
| I3U_RS00940 () | 64239..64916 | + | 678 | WP_032283208.1 | DUF2829 domain-containing protein | - |
| I3U_RS00945 () | 64923..65705 | + | 783 | WP_000432105.1 | hypothetical protein | - |
| I3U_RS00950 () | 65698..66792 | + | 1095 | WP_032283206.1 | hypothetical protein | - |
| I3U_RS00955 () | 66824..67132 | - | 309 | WP_001165936.1 | hypothetical protein | - |
| I3U_RS00960 () | 67122..70109 | - | 2988 | WP_109041933.1 | hypothetical protein | - |
| I3U_RS00965 () | 70122..70487 | - | 366 | WP_096858736.1 | ddrA | - |
| I3U_RS00970 () | 70484..72403 | - | 1920 | WP_109041935.1 | hypothetical protein | - |
| I3U_RS00975 () | 72405..73007 | - | 603 | WP_001345482.1 | hypothetical protein | - |
| I3U_RS00980 () | 72994..73437 | - | 444 | WP_000580770.1 | hypothetical protein | - |
| I3U_RS33235 () | 73434..73550 | - | 117 | WP_001312286.1 | hypothetical protein | - |
| I3U_RS00990 () | 73531..74028 | + | 498 | WP_077625665.1 | tail fiber assembly protein | - |
| I3U_RS00995 () | 74519..75090 | + | 572 | Protein_83 | serine O-acetyltransferase | - |
| I3U_RS01000 () | 75134..75711 | - | 578 | Protein_84 | tail fiber assembly protein | - |
| I3U_RS01005 () | 75711..78558 | - | 2848 | Protein_85 | tail fiber protein | - |
| I3U_RS01010 () | 78570..79004 | - | 435 | WP_001286326.1 | hypothetical protein | - |
| I3U_RS01015 () | 79083..79919 | - | 837 | WP_001189831.1 | hypothetical protein | - |
| I3U_RS01020 () | 79919..81352 | - | 1434 | WP_024224232.1 | bleomycin hydrolase | - |
| I3U_RS01025 () | 81349..81705 | - | 357 | WP_000002800.1 | hypothetical protein | - |
| I3U_RS01030 () | 81705..85097 | - | 3393 | WP_024224231.1 | lytic transglycosylase domain-containing protein | - |
| I3U_RS01035 () | 85179..86060 | - | 882 | WP_001702265.1 | hypothetical protein | - |
| I3U_RS01040 () | 86075..86686 | - | 612 | WP_000523978.1 | hypothetical protein | - |
| I3U_RS01045 () | 86697..87263 | - | 567 | WP_000188924.1 | hypothetical protein | - |
| I3U_RS33240 () | 87322..87798 | - | 477 | WP_170993452.1 | hypothetical protein | - |
| I3U_RS01055 () | 87850..88524 | - | 675 | WP_000120526.1 | hypothetical protein | - |
| I3U_RS01065 () | 88925..89146 | + | 222 | WP_000245702.1 | host cell division inhibitor Icd-like protein | - |
| I3U_RS01070 () | 89143..90180 | + | 1038 | WP_001749377.1 | phage antirepressor KilAC domain-containing protein | - |
| I3U_RS01075 () | 90344..91144 | + | 801 | WP_001187875.1 | phage antirepressor KilAC domain-containing protein | - |
| I3U_RS01080 () | 91174..92019 | + | 846 | WP_024224130.1 | hypothetical protein | - |
| I3U_RS01085 () | 92070..92315 | + | 246 | WP_001426344.1 | hypothetical protein | - |
| I3U_RS01090 () | 92497..92652 | + | 156 | WP_023351947.1 | type I toxin-antitoxin system Hok family toxin | - |
| I3U_RS01095 () | 92769..93278 | - | 510 | WP_000509943.1 | hypothetical protein | - |
| I3U_RS01100 () | 93290..93871 | - | 582 | WP_000035299.1 | hypothetical protein | - |
| I3U_RS01105 () | 93907..94722 | - | 816 | WP_000041774.1 | hypothetical protein | - |
| I3U_RS01110 () | 94732..96321 | - | 1590 | WP_000085153.1 | hypothetical protein | - |
| I3U_RS01115 () | 96382..98088 | - | 1707 | WP_000067713.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|