MGE detailed information
MGE type: Mobilizable plasmid MGE length: 83012 bp
Accession: NZ_CP028124 Location: 1..83012 Organism: Escherichia coli O26 str. RM10386 Replicon: plasmid pRM10386-2
Accession: NZ_CP028124 Location: 1..83012 Organism: Escherichia coli O26 str. RM10386 Replicon: plasmid pRM10386-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3U_RS00005 () | 1..515 | + | 515 | Protein_0 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| I3U_RS00010 () | 517..3513 | + | 2997 | WP_000217745.1 | Hemolysin, chromosomal | VF |
| I3U_RS00015 () | 3563..5683 | + | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| I3U_RS00020 () | 5687..7126 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| I3U_RS00025 () | 7193..7336 | + | 144 | Protein_4 | transcriptional regulator | - |
| I3U_RS00030 () | 7340..7531 | + | 192 | Protein_5 | lipid II-degrading bacteriocin | - |
| I3U_RS00035 () | 7539..7892 | - | 354 | WP_000864810.1 | colicin M immunity protein | - |
| I3U_RS00040 () | 8065..8847 | - | 783 | WP_001164205.1 | site-specific integrase | - |
| I3U_RS00045 () | 8849..9262 | - | 414 | WP_000465041.1 | hypothetical protein | - |
| I3U_RS00060 () | 9821..10051 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| I3U_RS00065 () | 10048..10464 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| I3U_RS00070 () | 10626..11171 | - | 546 | WP_001165114.1 | hypothetical protein | - |
| I3U_RS00075 () | 11239..12395 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| I3U_RS33175 () | 12436..12585 | - | 150 | WP_000955366.1 | hypothetical protein | - |
| I3U_RS00080 () | 13200..14060 | - | 861 | WP_109041911.1 | putative protein YcjY | VF |
| I3U_RS00085 () | 14188..14574 | + | 387 | WP_001066949.1 | tyrosine-type recombinase/integrase | - |
| I3U_RS00090 () | 14628..15302 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| I3U_RS00095 () | 15299..15646 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| I3U_RS00100 () | 15666..17218 | + | 1553 | Protein_18 | IS66 family transposase ISSfl3 | Transposase |
| I3U_RS00105 () | 17252..17611 | - | 360 | Protein_19 | DUF1449 family protein | - |
| I3U_RS00115 () | 17878..18543 | - | 666 | WP_000154135.1 | hypothetical protein | - |
| I3U_RS00120 () | 18684..19325 | - | 642 | WP_000335839.1 | transcription termination factor NusG | - |
| I3U_RS00135 () | 20027..21058 | + | 1032 | WP_000907857.1 | replication initiation protein | - |
| I3U_RS00150 () | 22018..24498 | - | 2481 | WP_109041913.1 | hypothetical protein | VF |
| I3U_RS00155 () | 24500..24919 | - | 420 | WP_109041915.1 | hypothetical protein | VF |
| I3U_RS00160 () | 25116..26303 | - | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| I3U_RS00165 () | 26303..26668 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| I3U_RS00175 () | 27068..27457 | - | 390 | Protein_27 | IS91 family transposase ISMno23 | Transposase |
| I3U_RS00180 () | 27491..29099 | - | 1609 | Protein_28 | IS66 family transposase ISSfl3 | Transposase |
| I3U_RS00185 () | 29119..29466 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| I3U_RS00190 () | 29463..30137 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| I3U_RS00195 () | 30191..30418 | - | 228 | WP_001341442.1 | transposase | - |
| I3U_RS00200 () | 30581..31558 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| I3U_RS00205 () | 32364..33577 | + | 1214 | WP_162908515.1 | IS3 family transposase IS629 | Transposase |
| I3U_RS00210 () | 33630..33926 | - | 297 | Protein_34 | IS3 family transposase ISKpn37 | Transposase |
| I3U_RS33180 () | 33931..34020 | - | 90 | Protein_35 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| I3U_RS00215 () | 34202..35389 | - | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| I3U_RS33185 () | 35419..35670 | + | 252 | WP_024184130.1 | hypothetical protein | - |
| I3U_RS00235 () | 37108..39317 | + | 2210 | Protein_39 | Catalase-peroxidase | VF |
| I3U_RS00240 () | 39361..39750 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| I3U_RS00245 () | 39864..40631 | + | 768 | Protein_41 | IS3 family transposase | - |
| I3U_RS00250 () | 40711..41106 | - | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| I3U_RS00255 () | 41106..42065 | - | 960 | WP_000921957.1 | plasmid segregation protein ParM | - |
| I3U_RS33190 () | 42314..43210 | + | 897 | WP_199917858.1 | DUF1281 domain-containing protein | - |
| I3U_RS00265 () | 43427..46410 | - | 2984 | Protein_45 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| I3U_RS00270 () | 46571..47161 | + | 591 | WP_000086536.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| I3U_RS00275 () | 47148..47366 | + | 219 | Protein_47 | hypothetical protein | - |
| I3U_RS00280 () | 47442..48125 | + | 684 | WP_000086167.1 | DNA methylase | - |
| I3U_RS00285 () | 48125..48343 | + | 219 | WP_001443814.1 | hypothetical protein | - |
| I3U_RS00290 () | 48355..48789 | + | 435 | WP_000274418.1 | DUF1380 family protein | - |
| I3U_RS33195 () | 48834..49073 | + | 240 | Protein_51 | hypothetical protein | - |
| I3U_RS33200 () | 49068..49316 | + | 249 | Protein_52 | conjugation system SOS inhibitor PsiB | - |
| I3U_RS00300 () | 49313..50032 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| I3U_RS33205 () | 50029..50626 | + | 598 | Protein_54 | hypothetical protein | - |
| I3U_RS00315 () | 51088..51588 | + | 501 | WP_000117628.1 | antirestriction protein ArdA | - |
| I3U_RS33210 () | 51590..52210 | - | 621 | WP_162137195.1 | hypothetical protein | - |
| I3U_RS00330 () | 52316..52750 | + | 435 | WP_000218854.1 | hypothetical protein | - |
| I3U_RS00335 () | 52843..53109 | + | 267 | WP_001247865.1 | hypothetical protein | - |
| I3U_RS00340 () | 53174..54064 | + | 891 | WP_000038351.1 | Recombination-promoting nuclease RpnA | VF |
| I3U_RS00345 () | 54064..54309 | + | 246 | WP_012605149.1 | hypothetical protein | - |
| I3U_RS00350 () | 54340..54591 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| I3U_RS33215 () | 54650..54925 | - | 276 | WP_001431784.1 | hypothetical protein | - |
| I3U_RS00360 () | 55170..56018 | + | 849 | WP_001341408.1 | DUF4942 domain-containing protein | - |
| I3U_RS00365 () | 56104..56439 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| I3U_RS00370 () | 56671..57003 | + | 333 | WP_001291056.1 | hypothetical protein | - |
| I3U_RS00375 () | 57015..59735 | + | 2721 | WP_000991399.1 | Protein TraI | Relaxase |
| I3U_RS00380 () | 59956..60276 | - | 321 | WP_001341409.1 | hypothetical protein | - |
| I3U_RS00385 () | 60315..61003 | + | 689 | Protein_68 | IS3 family transposase IS600 | Transposase |
| I3U_RS00400 () | 62408..62668 | + | 261 | Protein_70 | DUF1449 family protein | - |
| I3U_RS00405 () | 62716..62928 | - | 213 | Protein_71 | IS3 family transposase ISSfl10 | Transposase |
| I3U_RS32705 () | 62967..63224 | + | 258 | WP_000114001.1 | hypothetical protein | - |
| I3U_RS00415 () | 63472..67374 | - | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| I3U_RS00420 () | 67817..67990 | - | 174 | Protein_74 | IS66 family transposase | - |
| I3U_RS00425 () | 68052..68264 | + | 213 | Protein_75 | IS3 family transposase ISSfl10 | Transposase |
| I3U_RS32710 () | 68312..68731 | - | 420 | WP_136139077.1 | DUF1449 family protein | - |
| I3U_RS00440 () | 68662..69336 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| I3U_RS00445 () | 69333..69680 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| I3U_RS00450 () | 69700..71252 | + | 1553 | Protein_79 | IS66 family transposase ISSfl3 | Transposase |
| I3U_RS00455 () | 71531..72718 | - | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| I3U_RS00460 () | 72718..73083 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| I3U_RS00470 () | 73320..73667 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| I3U_RS00475 () | 73717..75249 | + | 1533 | WP_000998025.1 | IS66 family transposase ISEc8 | Transposase |
| I3U_RS00480 () | 75312..75500 | - | 189 | Protein_84 | hypothetical protein | - |
| I3U_RS00485 () | 75553..76551 | - | 999 | WP_012680945.1 | Lipid A biosynthesis myristoyltransferase | VF |
| I3U_RS00490 () | 76625..78345 | - | 1721 | Protein_86 | phosphoethanolamine transferase CptA | - |
| I3U_RS00495 () | 78439..79545 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| I3U_RS00500 () | 79545..80366 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| I3U_RS00510 () | 81838..82490 | + | 653 | Protein_89 | IS3 family transposase IS629 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|