MGE detailed information
MGE type: Prophage MGE length: 50621 bp
Accession: NZ_CP028122 Location: 1758289..1808909 Organism: Escherichia coli O43 str. RM10042 Replicon: chromosome
Accession: NZ_CP028122 Location: 1758289..1808909 Organism: Escherichia coli O43 str. RM10042 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3W_RS10250 () | 1754802..1755548 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| I3W_RS10255 () | 1755637..1756323 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| I3W_RS10260 () | 1756501..1756704 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| I3W_RS10265 () | 1756740..1758200 | - | 1461 | WP_000527781.1 | mannitol dehydrogenase family protein | - |
| I3W_RS10270 () | 1758289..1759572 | - | 1284 | Protein_1652 | MHS family MFS transporter YdfJ | - |
| I3W_RS27700 () | 1760177..1760290 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| I3W_RS10275 () | 1760359..1760592 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| I3W_RS10280 () | 1760909..1761499 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| I3W_RS10285 () | 1761597..1762172 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| I3W_RS10290 () | 1762172..1765570 | - | 3399 | WP_073547402.1 | prophage tail fiber N-terminal domain-containing protein | - |
| I3W_RS10295 () | 1765635..1766234 | - | 600 | WP_032292241.1 | hypothetical protein | VF |
| I3W_RS10300 () | 1766302..1769781 | - | 3480 | WP_000515751.1 | host specificity protein J | - |
| I3W_RS10305 () | 1769842..1770444 | - | 603 | WP_000090905.1 | tail assembly protein | - |
| I3W_RS10310 () | 1770381..1771124 | - | 744 | WP_000140764.1 | C40 family peptidase | - |
| I3W_RS10315 () | 1771130..1771828 | - | 699 | WP_108942344.1 | phage minor tail protein L | - |
| I3W_RS10320 () | 1771828..1772157 | - | 330 | WP_000847345.1 | phage tail protein | - |
| I3W_RS10325 () | 1772154..1774732 | - | 2579 | Protein_1664 | phage tail tape measure protein | - |
| I3W_RS10330 () | 1774725..1775159 | - | 435 | WP_000459480.1 | phage tail assembly protein T | - |
| I3W_RS10335 () | 1775141..1775563 | - | 423 | WP_000479139.1 | phage minor tail protein G | - |
| I3W_RS10340 () | 1775579..1776319 | - | 741 | WP_001439072.1 | phage tail protein | - |
| I3W_RS10345 () | 1776327..1776722 | - | 396 | WP_000683143.1 | phage minor tail U family protein | - |
| I3W_RS10350 () | 1776719..1777297 | - | 579 | WP_000985116.1 | phage tail protein | - |
| I3W_RS10355 () | 1777309..1777662 | - | 354 | WP_000752994.1 | head-tail joining protein | - |
| I3W_RS10360 () | 1777674..1778069 | - | 396 | WP_000158880.1 | DNA-packaging protein FI | - |
| I3W_RS10365 () | 1778111..1779136 | - | 1026 | WP_000063224.1 | major capsid protein | - |
| I3W_RS10370 () | 1779192..1779524 | - | 333 | WP_001549228.1 | head decoration protein | - |
| I3W_RS10375 () | 1779534..1780853 | - | 1320 | WP_000123333.1 | S49 family peptidase | - |
| I3W_RS10380 () | 1780834..1782435 | - | 1602 | WP_108942266.1 | phage portal protein | - |
| I3W_RS10385 () | 1782432..1782638 | - | 207 | WP_000198149.1 | gpW family protein | - |
| I3W_RS10390 () | 1782635..1784560 | - | 1926 | WP_032292250.1 | phage terminase large subunit family protein | - |
| I3W_RS10395 () | 1784535..1785080 | - | 546 | WP_000453603.1 | DNA-packaging protein | - |
| I3W_RS10405 () | 1785469..1785702 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| I3W_RS10410 () | 1785760..1786170 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| I3W_RS10415 () | 1786322..1786494 | - | 173 | Protein_1681 | addiction module toxin, GnsA/GnsB family | - |
| I3W_RS27705 () | 1786666..1786821 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| I3W_RS27710 () | 1786901..1786966 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| I3W_RS10425 () | 1786969..1787157 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| I3W_RS10430 () | 1787168..1787380 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| I3W_RS10435 () | 1787743..1788240 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| I3W_RS10440 () | 1788237..1788770 | - | 534 | WP_001092971.1 | lysozyme | - |
| I3W_RS10445 () | 1788767..1789078 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| I3W_RS10450 () | 1789083..1789298 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| I3W_RS28030 () | 1789518..1789688 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| I3W_RS10455 () | 1790052..1790267 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| I3W_RS10460 () | 1790568..1790780 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| I3W_RS27715 () | 1790835..1790924 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| I3W_RS10465 () | 1791202..1791954 | - | 753 | WP_001047135.1 | antitermination protein | - |
| I3W_RS10470 () | 1791968..1793017 | - | 1050 | WP_108942346.1 | DUF968 domain-containing protein | - |
| I3W_RS10475 () | 1793019..1793297 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| I3W_RS10480 () | 1793364..1793615 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| I3W_RS10485 () | 1793832..1793987 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I3W_RS10490 () | 1794059..1794346 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| I3W_RS10495 () | 1794346..1794585 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| I3W_RS10500 () | 1794610..1794915 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| I3W_RS10505 () | 1795118..1795450 | + | 333 | WP_001317460.1 | FlxA-like family protein | - |
| I3W_RS10515 () | 1795887..1797200 | - | 1314 | WP_108942348.1 | ISNCY family transposase ISCARN112 | Transposase |
| I3W_RS27905 () | 1797969..1798256 | - | 288 | Protein_1704 | hypothetical protein | - |
| I3W_RS10530 () | 1798867..1799223 | - | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| I3W_RS10535 () | 1799220..1799642 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| I3W_RS10540 () | 1799683..1800648 | - | 966 | WP_000054512.1 | hypothetical protein | - |
| I3W_RS10545 () | 1800629..1801150 | - | 522 | WP_000705358.1 | hypothetical protein | - |
| I3W_RS10550 () | 1801134..1801364 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| I3W_RS10555 () | 1801448..1801855 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| I3W_RS10560 () | 1802022..1802177 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| I3W_RS10570 () | 1802337..1802555 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| I3W_RS10580 () | 1803123..1803311 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| I3W_RS10585 () | 1803308..1803499 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| I3W_RS10590 () | 1803592..1806063 | + | 2472 | WP_040089035.1 | exonuclease | - |
| I3W_RS10595 () | 1806136..1806387 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| I3W_RS10600 () | 1806422..1807702 | + | 1281 | WP_000877001.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| I3W_RS10610 () | 1807890..1808909 | - | 1020 | WP_000836057.1 | Zn-dependent oxidoreductase | - |
| I3W_RS10615 () | 1808921..1810135 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| I3W_RS10625 () | 1810341..1810667 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| I3W_RS10630 () | 1810802..1811143 | + | 342 | WP_000705214.1 | DUF1283 family protein | - |
| I3W_RS10635 () | 1811178..1811738 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| I3W_RS10640 () | 1811741..1812451 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| I3W_RS10645 () | 1812559..1812864 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|