MGE detailed information
MGE type: Conjugative plasmid MGE length: 78469 bp
Accession: NZ_CP028118 Location: 1..78469 Organism: Escherichia coli O111 str. RM9322 Replicon: plasmid pRM9322-1
Accession: NZ_CP028118 Location: 1..78469 Organism: Escherichia coli O111 str. RM9322 Replicon: plasmid pRM9322-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3O_RS27540 () | 154..465 | - | 312 | WP_000012104.1 | type IV conjugative transfer system protein TraL | - |
| I3O_RS27545 () | 480..839 | - | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| I3O_RS27550 () | 872..1267 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| I3O_RS27555 () | 1366..2055 | - | 690 | WP_000283394.1 | conjugal transfer transcriptional regulator TraJ | - |
| I3O_RS27560 () | 2242..2625 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| I3O_RS27565 () | 3039..3548 | + | 510 | Protein_6 | transglycosylase SLT domain-containing protein | - |
| I3O_RS27570 () | 3845..4666 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| I3O_RS27575 () | 4787..5074 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| I3O_RS27595 () | 5996..6154 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 6198..6422 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 6198..6422 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 6198..6422 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 6198..6422 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| I3O_RS28440 () | 6234..6422 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| I3O_RS27600 () | 6434..7153 | - | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| I3O_RS27605 () | 7150..7584 | - | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| I3O_RS27610 () | 7639..9597 | - | 1959 | WP_001145472.1 | ParB/RepB/Spo0J family partition protein | - |
| I3O_RS27615 () | 9656..9889 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| I3O_RS27620 () | 9945..10472 | - | 528 | WP_000290792.1 | single-stranded DNA-binding protein | - |
| I3O_RS28445 () | 10945..11241 | - | 297 | WP_077694982.1 | hypothetical protein | - |
| I3O_RS27635 () | 11393..11955 | - | 563 | Protein_17 | class I SAM-dependent methyltransferase | - |
| I3O_RS27640 () | 12002..13363 | - | 1362 | WP_000170683.1 | DUF3560 domain-containing protein | - |
| I3O_RS27645 () | 13415..13645 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| I3O_RS27660 () | 14683..14874 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| I3O_RS27665 () | 14871..15293 | - | 423 | WP_000271680.1 | DUF1380 family protein | - |
| I3O_RS27670 () | 15340..15642 | - | 303 | WP_072106536.1 | antirestriction protein | - |
| I3O_RS27680 () | 16015..16380 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| I3O_RS27685 () | 16380..17567 | + | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| I3O_RS27690 () | 17674..18045 | - | 372 | WP_000086162.1 | restriction endonuclease subunit M | - |
| I3O_RS27695 () | 18121..18433 | - | 313 | Protein_26 | hypothetical protein | - |
| I3O_RS27700 () | 18430..19332 | - | 903 | WP_077629034.1 | DUF1281 domain-containing protein | - |
| I3O_RS27705 () | 19605..20564 | + | 960 | WP_000921961.1 | plasmid segregation protein ParM | - |
| I3O_RS27710 () | 20564..20959 | + | 396 | WP_000445936.1 | plasmid partitioning/stability family protein | - |
| I3O_RS27715 () | 21039..21805 | - | 767 | Protein_30 | IS3 family transposase | - |
| I3O_RS27720 () | 21919..22308 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| I3O_RS27725 () | 22352..23281 | - | 930 | Protein_32 | Catalase-peroxidase | VF |
| I3O_RS27730 () | 23334..24547 | + | 1214 | WP_162829242.1 | IS3 family transposase IS629 | Transposase |
| I3O_RS27740 () | 24867..28832 | + | 3966 | WP_001034091.1 | Serine protease EspP | VF |
| I3O_RS27750 () | 29339..29593 | + | 255 | WP_000997720.1 | hypothetical protein | - |
| I3O_RS27755 () | 29732..30097 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| I3O_RS27760 () | 30097..31284 | + | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| I3O_RS27765 () | 31488..31727 | - | 240 | WP_000859016.1 | MarR family transcriptional regulator | - |
| I3O_RS27770 () | 31740..32000 | - | 261 | WP_001344604.1 | hypothetical protein | - |
| I3O_RS27785 () | 32703..33560 | - | 858 | WP_000130993.1 | incFII family plasmid replication initiator RepA | - |
| I3O_RS27790 () | 33553..33627 | - | 75 | WP_001365571.1 | RepA leader peptide Tap | - |
| I3O_RS27800 () | 33862..34119 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| I3O_RS27805 () | 34359..34946 | - | 588 | WP_000766809.1 | DUF2726 domain-containing protein | - |
| I3O_RS27810 () | 34984..35193 | - | 210 | WP_001369435.1 | hemolysin expression modulator Hha | - |
| I3O_RS27815 () | 35239..35700 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| I3O_RS27820 () | 35945..36157 | - | 213 | WP_001369432.1 | ANR family transcriptional regulator | - |
| I3O_RS27825 () | 36275..36808 | - | 534 | Protein_47 | IS66 family transposase ISEc8 | Transposase |
| I3O_RS27830 () | 36900..37280 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| I3O_RS27835 () | 37277..37625 | + | 349 | Protein_49 | IS66 family transposase ISEc8 | Transposase |
| I3O_RS27840 () | 37675..39213 | + | 1539 | WP_108988525.1 | IS66 family transposase ISEc8 | Transposase |
| I3O_RS27845 () | 39252..39905 | + | 654 | Protein_51 | IS3 family transposase ISEc48 | Transposase |
| I3O_RS27850 () | 40032..41471 | - | 1440 | WP_001213544.1 | Hemolysin secretion protein D, chromosomal | VF |
| I3O_RS27855 () | 41475..43595 | - | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| I3O_RS27860 () | 43645..46641 | - | 2997 | WP_000217744.1 | Hemolysin, chromosomal | VF |
| I3O_RS27865 () | 46643..47158 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| I3O_RS27875 () | 47681..48177 | - | 497 | Protein_56 | IS3 family transposase IS629 | Transposase |
| I3O_RS27880 () | 48268..48633 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| I3O_RS27885 () | 48633..49820 | + | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| I3O_RS27890 () | 50009..50161 | - | 153 | Protein_59 | IS3 family transposase IS1203 | Transposase |
| I3O_RS27900 () | 51633..52454 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| I3O_RS27905 () | 52454..53560 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| I3O_RS27910 () | 53654..55375 | + | 1722 | WP_000550555.1 | phosphoethanolamine transferase CptA | - |
| I3O_RS27915 () | 55449..56447 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| I3O_RS27920 () | 56500..56688 | + | 189 | Protein_64 | hypothetical protein | - |
| I3O_RS27925 () | 56751..58289 | - | 1539 | WP_000998093.1 | IS66 family transposase ISEc8 | Transposase |
| I3O_RS27930 () | 58339..58687 | - | 349 | Protein_66 | IS66 family transposase ISEc8 | Transposase |
| I3O_RS27935 () | 58684..59064 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| I3O_RS27940 () | 59214..59774 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| I3O_RS27945 () | 59877..60737 | - | 861 | WP_000704529.1 | putative protein YcjY | VF |
| I3O_RS27950 () | 60796..61542 | - | 747 | WP_000205714.1 | conjugal transfer pilus acetylase TraX | - |
| I3O_RS27955 () | 61562..66832 | - | 5271 | WP_000986985.1 | Multifunctional conjugation protein TraI | Relaxase |
| I3O_RS27960 () | 66832..68985 | - | 2154 | WP_001369365.1 | type IV conjugative transfer system coupling protein TraD | - |
| I3O_RS27965 () | 69238..69969 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| I3O_RS27970 () | 69983..70492 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| I3O_RS27975 () | 70489..72156 | - | 1668 | Protein_75 | conjugal transfer protein TraG | - |
| I3O_RS27980 () | 72209..73422 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| I3O_RS27985 () | 73464..74627 | - | 1164 | Protein_77 | conjugal transfer mating pair stabilization protein TraG | - |
| I3O_RS27990 () | 74624..75223 | - | 600 | Protein_78 | conjugal transfer protein TraH | - |
| I3O_RS27995 () | 75204..75326 | - | 123 | WP_001369729.1 | DUF2689 domain-containing protein | - |
| I3O_RS28000 () | 75313..75903 | - | 591 | WP_000002783.1 | conjugal transfer protein TraP | - |
| I3O_RS28005 () | 75893..77320 | - | 1428 | WP_000146670.1 | conjugal transfer protein TraB | - |
| I3O_RS28010 () | 77320..78048 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|