MGE detailed information
MGE type: Prophage MGE length: 59711 bp
Accession: NZ_CP028117 Location: 1655650..1715360 Organism: Escherichia coli O111 str. RM9322 Replicon: chromosome
Accession: NZ_CP028117 Location: 1655650..1715360 Organism: Escherichia coli O111 str. RM9322 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3O_RS28690 () | 1651639..1651686 | + | 48 | WP_211180494.1 | protein YnaN | - |
| I3O_RS08805 () | 1651700..1652683 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| I3O_RS08815 () | 1653161..1654534 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| I3O_RS08820 () | 1654663..1655598 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| I3O_RS08825 () | 1655650..1656885 | - | 1236 | WP_000040839.1 | Putative defective protein IntQ ; Integrase | Integrase |
| I3O_RS08830 () | 1656887..1657102 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| I3O_RS08835 () | 1657202..1657390 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 1657206..1657384 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1657206..1657384 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1657206..1657384 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1657206..1657384 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| I3O_RS08840 () | 1657428..1657577 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| I3O_RS08845 () | 1657633..1658442 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| I3O_RS08850 () | 1658435..1661035 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| I3O_RS08855 () | 1661137..1661412 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| I3O_RS08860 () | 1661487..1661657 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| I3O_RS08865 () | 1661657..1661878 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| I3O_RS08875 () | 1662320..1662808 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| I3O_RS08880 () | 1662805..1662960 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| I3O_RS08885 () | 1662971..1663150 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| I3O_RS08895 () | 1663393..1663812 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| I3O_RS08900 () | 1663892..1664146 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| I3O_RS08905 () | 1664143..1664565 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| I3O_RS08910 () | 1664643..1665431 | + | 789 | WP_001304174.1 | hypothetical protein | - |
| I3O_RS08915 () | 1665438..1666184 | + | 747 | WP_000788980.1 | ATP-binding protein | - |
| I3O_RS08920 () | 1666207..1666968 | + | 762 | WP_000450712.1 | DUF1627 domain-containing protein | - |
| I3O_RS08925 () | 1666984..1667406 | + | 423 | WP_001141110.1 | DUF977 family protein | - |
| I3O_RS08930 () | 1667512..1667724 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| I3O_RS08935 () | 1667757..1667974 | + | 218 | Protein_1620 | DUF4014 family protein | - |
| I3O_RS08940 () | 1667976..1668239 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| I3O_RS08945 () | 1668250..1668411 | + | 162 | WP_000208018.1 | hypothetical protein | - |
| I3O_RS08950 () | 1668490..1668735 | + | 246 | WP_000365100.1 | hypothetical protein | - |
| I3O_RS08955 () | 1669167..1670318 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| I3O_RS08960 () | 1670286..1671275 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| I3O_RS08965 () | 1671275..1672666 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| I3O_RS08970 () | 1673166..1673765 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| I3O_RS08975 () | 1673765..1674055 | + | 291 | WP_000247761.1 | DUF1364 domain-containing protein | - |
| I3O_RS08980 () | 1674052..1674606 | + | 555 | WP_000640158.1 | DUF1133 family protein | - |
| I3O_RS08995 () | 1675168..1675599 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| I3O_RS09000 () | 1675596..1675851 | + | 256 | Protein_1631 | DUF3927 family protein | - |
| I3O_RS09005 () | 1676170..1678023 | + | 1854 | WP_106914131.1 | SASA family carbohydrate esterase | - |
| I3O_RS09010 () | 1678173..1678388 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| I3O_RS09015 () | 1678393..1678737 | + | 345 | WP_000731221.1 | YdfR family protein | - |
| I3O_RS09020 () | 1678788..1679321 | + | 534 | WP_000992086.1 | lysozyme | - |
| I3O_RS09025 () | 1679595..1680134 | + | 540 | WP_001344811.1 | phage antirepressor KilAC domain-containing protein | - |
| I3O_RS09035 () | 1681403..1681890 | - | 488 | Protein_1638 | IS256 family transposase ISEic2 | Transposase |
| I3O_RS09040 () | 1682377..1682655 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| I3O_RS09045 () | 1683083..1683229 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| I3O_RS09050 () | 1683366..1684013 | - | 648 | WP_001303944.1 | hypothetical protein | VF |
| I3O_RS09055 () | 1684197..1684787 | + | 591 | WP_001144879.1 | hypothetical protein | VF |
| I3O_RS09060 () | 1685006..1686062 | - | 1057 | Protein_1643 | IS630 family transposase | - |
| I3O_RS28525 () | 1686294..1686944 | + | 651 | WP_001345079.1 | hypothetical protein | VF |
| I3O_RS09070 () | 1687115..1687350 | + | 236 | Protein_1645 | IS3 family transposase | - |
| I3O_RS09075 () | 1687293..1687646 | - | 354 | WP_001261191.1 | recombinase family protein | - |
| I3O_RS09080 () | 1687737..1688456 | + | 720 | WP_000171274.1 | TonB system transport protein TonB | - |
| I3O_RS09085 () | 1688496..1688894 | - | 399 | WP_000108160.1 | acyl-CoA thioester hydrolase YciA | - |
| I3O_RS09090 () | 1688999..1689538 | - | 540 | WP_000808667.1 | septation protein A | - |
| I3O_RS09095 () | 1689568..1690311 | - | 744 | WP_000028550.1 | envelope biogenesis factor ElyC | - |
| I3O_RS09100 () | 1690339..1690428 | - | 90 | Protein_1651 | YkgJ family cysteine cluster protein | - |
| I3O_RS09105 () | 1690668..1691306 | + | 639 | WP_000737224.1 | outer membrane protein OmpW | - |
| I3O_RS09110 () | 1691352..1692482 | - | 1131 | WP_000113674.1 | hypothetical protein ; Integrase | Integrase |
| I3O_RS09115 () | 1692460..1692708 | - | 249 | WP_000113189.1 | excisionase | - |
| I3O_RS09120 () | 1692773..1695244 | - | 2472 | WP_000048484.1 | exonuclease | - |
| I3O_RS09125 () | 1695340..1695528 | - | 189 | WP_000199480.1 | DUF1482 family protein | - |
| I3O_RS09130 () | 1695525..1695713 | - | 189 | WP_000449172.1 | cell division inhibitor | - |
| I3O_RS09140 () | 1696274..1696507 | + | 234 | WP_000920491.1 | hypothetical protein | - |
| I3O_RS09145 () | 1696485..1696892 | - | 408 | WP_000394552.1 | hypothetical protein | - |
| I3O_RS09150 () | 1696915..1697133 | - | 219 | WP_001171894.1 | hypothetical protein | - |
| I3O_RS09155 () | 1697206..1697505 | - | 300 | WP_001240336.1 | hypothetical protein | - |
| I3O_RS09160 () | 1697770..1698177 | - | 408 | WP_000787428.1 | helix-turn-helix domain-containing protein | - |
| I3O_RS09165 () | 1698254..1698480 | + | 227 | Protein_1663 | transcriptional regulator | - |
| I3O_RS09170 () | 1698464..1699015 | + | 552 | WP_000705622.1 | hypothetical protein | - |
| I3O_RS28235 () | 1698987..1700027 | + | 1041 | WP_000020556.1 | DNA-binding protein | - |
| I3O_RS09175 () | 1699939..1700481 | + | 543 | WP_157825328.1 | replication protein | - |
| I3O_RS09180 () | 1700515..1701249 | + | 735 | WP_000450683.1 | DUF1627 domain-containing protein | - |
| I3O_RS28240 () | 1701246..1701410 | + | 165 | WP_001505071.1 | hypothetical protein | - |
| I3O_RS09190 () | 1702109..1702867 | + | 759 | WP_001449026.1 | hypothetical protein | VF |
| I3O_RS09200 () | 1703203..1703358 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I3O_RS09205 () | 1703579..1703836 | + | 258 | WP_001217394.1 | hypothetical protein | - |
| I3O_RS09210 () | 1703906..1704184 | + | 279 | WP_032178572.1 | hypothetical protein | - |
| I3O_RS09215 () | 1704186..1705241 | + | 1056 | WP_001265289.1 | DUF968 domain-containing protein | - |
| I3O_RS09220 () | 1705242..1705607 | + | 366 | WP_000140002.1 | RusA family crossover junction endodeoxyribonuclease | - |
| I3O_RS09225 () | 1705604..1706293 | + | 690 | WP_001059384.1 | antiterminator | - |
| I3O_RS09245 () | 1706916..1707344 | + | 429 | Protein_1676 | tellurite resistance TerB family protein | - |
| I3O_RS09250 () | 1707341..1707596 | + | 256 | Protein_1677 | DUF3927 family protein | - |
| I3O_RS09260 () | 1707823..1709589 | + | 1767 | Protein_1678 | DUF1737 domain-containing protein | - |
| I3O_RS09265 () | 1709644..1710857 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| I3O_RS09275 () | 1710947..1711216 | + | 270 | WP_001023452.1 | phage tail fiber C-terminal domain-containing protein | - |
| I3O_RS09280 () | 1711357..1712232 | + | 876 | WP_000491542.1 | hypothetical protein | VF |
| I3O_RS28245 () | 1712457..1713107 | - | 651 | WP_001121225.1 | hypothetical protein | VF |
| I3O_RS09295 () | 1713111..1713377 | - | 267 | Protein_1683 | hypothetical protein | - |
| I3O_RS28530 () | 1713435..1713584 | - | 150 | WP_001345374.1 | hypothetical protein | - |
| I3O_RS09300 () | 1713703..1713945 | - | 243 | WP_012817881.1 | DinI-like family protein | - |
| I3O_RS09305 () | 1714077..1715360 | + | 1284 | Protein_1686 | MHS family MFS transporter YdfJ | - |
| I3O_RS09310 () | 1715449..1716909 | + | 1461 | WP_000527750.1 | mannitol dehydrogenase family protein | - |
| I3O_RS09315 () | 1716945..1717148 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| I3O_RS09320 () | 1717326..1718012 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| I3O_RS09325 () | 1718101..1718847 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|