MGE detailed information
MGE type: Prophage MGE length: 59784 bp
Accession: NZ_CP028117 Location: 1345182..1404965 Organism: Escherichia coli O111 str. RM9322 Replicon: chromosome
Accession: NZ_CP028117 Location: 1345182..1404965 Organism: Escherichia coli O111 str. RM9322 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3O_RS07030 () | 1340914..1341735 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| I3O_RS07035 () | 1341874..1342662 | - | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| I3O_RS07040 () | 1342659..1343120 | - | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| I3O_RS07045 () | 1343178..1344224 | - | 1047 | WP_000759338.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| I3O_RS07050 () | 1344221..1345015 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| I3O_RS07055 () | 1345182..1346300 | - | 1119 | WP_000074981.1 | hypothetical protein ; Integrase | Integrase |
| I3O_RS07060 () | 1346269..1346538 | - | 270 | WP_000003742.1 | excisionase | - |
| I3O_RS07065 () | 1346600..1349065 | - | 2466 | WP_000048442.1 | exonuclease | - |
| I3O_RS07070 () | 1349158..1349349 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| I3O_RS07075 () | 1349346..1349534 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| I3O_RS07085 () | 1350018..1350236 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| I3O_RS07090 () | 1350277..1350666 | - | 390 | WP_001447517.1 | hypothetical protein | - |
| I3O_RS07100 () | 1350962..1351240 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I3O_RS07105 () | 1351242..1351433 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| I3O_RS07110 () | 1351454..1351825 | - | 372 | WP_001169687.1 | hypothetical protein | - |
| I3O_RS07115 () | 1351923..1352225 | + | 303 | WP_001444689.1 | transcriptional regulator | - |
| I3O_RS07120 () | 1352222..1352647 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| I3O_RS07125 () | 1352670..1353632 | + | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| I3O_RS07130 () | 1353673..1354089 | + | 417 | WP_023981635.1 | DUF977 family protein | - |
| I3O_RS07145 () | 1355652..1355963 | + | 312 | WP_001002672.1 | hypothetical protein | - |
| I3O_RS07150 () | 1356269..1356847 | + | 579 | WP_001204666.1 | sce7726 family protein | - |
| I3O_RS07155 () | 1356807..1357904 | - | 1098 | WP_000156210.1 | beta family protein | - |
| I3O_RS07165 () | 1359790..1359930 | + | 141 | WP_072058819.1 | type I toxin-antitoxin system Hok family toxin | - |
| I3O_RS07175 () | 1360098..1360370 | + | 273 | WP_012817871.1 | hypothetical protein | - |
| I3O_RS07180 () | 1360372..1361427 | + | 1056 | WP_001369253.1 | DUF968 domain-containing protein | - |
| I3O_RS07185 () | 1361428..1361793 | + | 366 | WP_000140024.1 | RusA family crossover junction endodeoxyribonuclease | - |
| I3O_RS07190 () | 1361802..1362332 | + | 531 | WP_000640048.1 | DUF1133 family protein | - |
| I3O_RS28160 () | 1362574..1362771 | + | 198 | WP_000917750.1 | hypothetical protein | - |
| I3O_RS07200 () | 1362922..1363980 | + | 1059 | WP_000935544.1 | site-specific DNA-methyltransferase | - |
| I3O_RS07220 () | 1364777..1366528 | + | 1752 | Protein_1298 | DUF1737 domain-containing protein | - |
| I3O_RS07235 () | 1368379..1368594 | + | 216 | WP_024164617.1 | class II holin family protein | - |
| I3O_RS07240 () | 1368599..1368943 | + | 345 | WP_000731236.1 | YdfR family protein | - |
| I3O_RS07245 () | 1368994..1369527 | + | 534 | WP_000992167.1 | lysozyme | - |
| I3O_RS07250 () | 1369798..1370367 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| I3O_RS28165 () | 1370367..1370513 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| I3O_RS28175 () | 1370741..1370926 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| I3O_RS07260 () | 1371351..1371578 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| I3O_RS07265 () | 1371620..1371985 | + | 366 | WP_000279788.1 | HNH endonuclease | - |
| I3O_RS07275 () | 1372275..1372838 | + | 564 | WP_000958415.1 | terminase small subunit | - |
| I3O_RS07280 () | 1372835..1374496 | + | 1662 | WP_001369319.1 | terminase large subunit | - |
| I3O_RS07285 () | 1374560..1376497 | + | 1938 | WP_000172984.1 | phage major capsid protein | - |
| I3O_RS07290 () | 1376542..1376763 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| I3O_RS07295 () | 1376709..1379455 | + | 2747 | Protein_1312 | phage portal protein | - |
| I3O_RS07300 () | 1379452..1379778 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| I3O_RS07305 () | 1379788..1380138 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| I3O_RS07310 () | 1380135..1380581 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| I3O_RS07315 () | 1380578..1380922 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| I3O_RS07320 () | 1380989..1381705 | + | 717 | WP_001275472.1 | tail protein | - |
| I3O_RS07325 () | 1381711..1382085 | + | 375 | WP_001030042.1 | phage tail assembly chaperone | - |
| I3O_RS07330 () | 1382181..1382390 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| I3O_RS07335 () | 1382442..1385684 | + | 3243 | WP_000212932.1 | phage tail tape measure protein | - |
| I3O_RS07340 () | 1385677..1386018 | + | 342 | WP_000807928.1 | phage tail protein | - |
| I3O_RS07345 () | 1386018..1386716 | + | 699 | WP_001447444.1 | phage minor tail protein L | - |
| I3O_RS07350 () | 1386733..1387053 | - | 321 | WP_001302649.1 | Arc family DNA-binding protein | - |
| I3O_RS07355 () | 1387161..1387334 | + | 174 | WP_001154345.1 | Arc family DNA-binding protein | - |
| I3O_RS07360 () | 1387405..1388327 | + | 923 | Protein_1325 | phage antirepressor Ant | - |
| I3O_RS07365 () | 1388382..1389119 | + | 738 | WP_000967279.1 | C40 family peptidase | - |
| I3O_RS07370 () | 1389065..1389697 | + | 633 | WP_122996286.1 | tail assembly protein | - |
| I3O_RS07375 () | 1389934..1393413 | + | 3480 | WP_000514853.1 | host specificity protein J | - |
| I3O_RS07380 () | 1393480..1394079 | + | 600 | WP_001230459.1 | Outer membrane protein X | VF |
| I3O_RS07385 () | 1394144..1395466 | + | 1323 | WP_000268887.1 | ISNCY family transposase KIS | Transposase |
| I3O_RS07390 () | 1395468..1395737 | + | 270 | WP_001023356.1 | phage tail fiber C-terminal domain-containing protein | - |
| I3O_RS28180 () | 1395739..1395831 | + | 93 | Protein_1332 | tail assembly protein | - |
| I3O_RS28185 () | 1395844..1395933 | + | 90 | WP_115801847.1 | hypothetical protein | - |
| I3O_RS07395 () | 1395953..1398301 | + | 2349 | WP_001301673.1 | E3 ubiquitin-protein ligase SopA | VF |
| I3O_RS07400 () | 1398892..1402293 | + | 3402 | WP_001369471.1 | hypothetical protein | VF |
| I3O_RS28500 () | 1402670..1402822 | - | 153 | Protein_1336 | IS256 family transposase ISSoEn2 | Transposase |
| I3O_RS28505 () | 1402822..1403040 | + | 219 | Protein_1337 | IS256 family transposase ISSoEn2 | Transposase |
| I3O_RS07410 () | 1403075..1403188 | + | 114 | Protein_1338 | non-LEE encoded effector protein NleB | - |
| I3O_RS07415 () | 1403268..1403543 | - | 276 | WP_001303921.1 | hypothetical protein | - |
| I3O_RS07420 () | 1403604..1404965 | - | 1362 | WP_000938117.1 | hypothetical protein | VF |
| I3O_RS07430 () | 1405329..1406192 | - | 864 | WP_000799400.1 | spermidine/putrescine ABC transporter permease PotB | - |
| I3O_RS07435 () | 1406176..1407312 | - | 1137 | WP_000531601.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
| I3O_RS07445 () | 1407562..1408791 | + | 1230 | WP_000359442.1 | peptidase T | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|